| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is phoP [C]
Identifier: 66043360
GI number: 66043360
Start: 96943
End: 98331
Strand: Reverse
Name: phoP [C]
Synonym: Psyr_0089
Alternate gene names: 66043360
Gene position: 98331-96943 (Counterclockwise)
Preceding gene: 66043361
Following gene: 66043357
Centisome position: 1.61
GC content: 64.22
Gene sequence:
>1389_bases ATGATGACCGCTGTAGTTTTGCCCGCCGTTCCTCGCGTACTGATAGCCGAGTCTGATCCGTGGGTTCGCGAGACGCTTAG CGACCTGGTGCTGGGCGTGCGTGCGGATATCGAGCTGGAGATGTGCACCGATGGCAAACAGGCCGTCGAGTGGATGAAAA AACACCTGCCGGACCTGATCATCGCCGCCCGCGAACTGCCGGGGATCGATGGCCTGAGCCTGCTGCGCGGCGTGCGCAAT CTGCGTCGTCAGCCCGCCATCCCGTTCATTCTGATCAGTAATCGCAATGACAGCGCCAGCGTGCGCGAGGTCGTGCCGCT GGCACCGACTGCCTACCTGACCAAACCGCTGAACACCGAAGGGCTGCGCCAGCGTCTTGAAGGCCTGCTGCTGGAACGCA GCGCCCCGGTTGCGGGTGCGGTGCCCGCGCTGACGCCGGGTCTGACCCTGACCAAGTTTCTCGACAAACGCCGCGACATC GCCGATGGCGCGCCGCTGTTCGTCGATGTCGCCACGGCGGTGACGCTCAGCCAGACCGCCAGCGGCATCGACGCCGCCCT GCTGGAGCAGGAACTGCGCAACGATCCGCACATCACCGCCGTACTGATCGCCGCCGCCAACACGGCGGCGCAGCACCTGG GCAAGCCGATTCAGACCATGGGCGGGGCGCTGGCCATTCTCGGGCCAGTGCAGGTCGCCAATATCGCGTCCGGTCTGGGC AAAAAGCGTATGGCGGTGCTGACCAACGACGCGTTGCTGGCCAAGGCCCATGAGCTGTGGACCCTGTCGCAGCGCACGGC TGATTACGCGCGCATCCTGGGCGGCATGCTGGAGCTGGATGCGGAGCGCTGTTTTAGCGCCGGACTGCTGCAGTCGCTGG GCGATCTGGCGGTATTGGGTTGTCTGCAGGAGTGGCTGCTGGCTGGCGGCCAACTGGATGAGCAGGTGATCGGGCAGTCT CTGGAGCAGTACTCCGCGGCCTTCGGTTCTGCTCTGCGCACCCGCTGGCGTTTGCCGCTGGAACTGCGTGAGCTGATCGC TGCGGTGTATCAGTACAATACCGGCATCTACACACGCGAAGTGCTGGCAATGAACCTGGCGGGGCAGATGGCGCGCTTGG GCGAGGAAGAAAGTGTCACCACGCTGATCAAGACCAAGTCGGCCAAGCTGTTGAAGCTCAGCGTCGGTGACTTGCAGCGC CTGCGCAAGAAGCTGACAGGGGTGACGGATCCGAGTTTGCTGAGGCCGCTGTCTAGCGAAACTGAGGTGGCTGCCGAGGC GGTCGACGACGAGCCTGATCTGCTCGACCTGGCACCTGAGGCACCTGCTGAAGCGCCTGCTGCGATCGAGGATCCGGCAG ACGCTGTTCAGGGTCCGCCCGAAAAGTAA
Upstream 100 bases:
>100_bases TTCGACGGGTTTTTTTTGCTTTGGAGCGGGGTATTTCGCTGTTTTGGGTATATCCGGACGTTTGCATTGGCTAAGGTGGT CGCATTGACATCGGAGAGTC
Downstream 100 bases:
>100_bases AAACCCCACTGACGCCTTCGCGAGCAAGGTACCGCGTACTCCTGTAGGAGCGAACTTGTTCGCGAAGGCGGTATTCCTGA CGCAGAAAATCCATCGACTG
Product: response regulator receiver
Products: NA
Alternate protein names: Signal Transduction Protein; Response Regulator Receiver Protein; Response Regulator Receiver Domain Protein
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MMTAVVLPAVPRVLIAESDPWVRETLSDLVLGVRADIELEMCTDGKQAVEWMKKHLPDLIIAARELPGIDGLSLLRGVRN LRRQPAIPFILISNRNDSASVREVVPLAPTAYLTKPLNTEGLRQRLEGLLLERSAPVAGAVPALTPGLTLTKFLDKRRDI ADGAPLFVDVATAVTLSQTASGIDAALLEQELRNDPHITAVLIAAANTAAQHLGKPIQTMGGALAILGPVQVANIASGLG KKRMAVLTNDALLAKAHELWTLSQRTADYARILGGMLELDAERCFSAGLLQSLGDLAVLGCLQEWLLAGGQLDEQVIGQS LEQYSAAFGSALRTRWRLPLELRELIAAVYQYNTGIYTREVLAMNLAGQMARLGEEESVTTLIKTKSAKLLKLSVGDLQR LRKKLTGVTDPSLLRPLSSETEVAAEAVDDEPDLLDLAPEAPAEAPAAIEDPADAVQGPPEK
Sequences:
>Translated_462_residues MMTAVVLPAVPRVLIAESDPWVRETLSDLVLGVRADIELEMCTDGKQAVEWMKKHLPDLIIAARELPGIDGLSLLRGVRN LRRQPAIPFILISNRNDSASVREVVPLAPTAYLTKPLNTEGLRQRLEGLLLERSAPVAGAVPALTPGLTLTKFLDKRRDI ADGAPLFVDVATAVTLSQTASGIDAALLEQELRNDPHITAVLIAAANTAAQHLGKPIQTMGGALAILGPVQVANIASGLG KKRMAVLTNDALLAKAHELWTLSQRTADYARILGGMLELDAERCFSAGLLQSLGDLAVLGCLQEWLLAGGQLDEQVIGQS LEQYSAAFGSALRTRWRLPLELRELIAAVYQYNTGIYTREVLAMNLAGQMARLGEEESVTTLIKTKSAKLLKLSVGDLQR LRKKLTGVTDPSLLRPLSSETEVAAEAVDDEPDLLDLAPEAPAEAPAAIEDPADAVQGPPEK >Mature_462_residues MMTAVVLPAVPRVLIAESDPWVRETLSDLVLGVRADIELEMCTDGKQAVEWMKKHLPDLIIAARELPGIDGLSLLRGVRN LRRQPAIPFILISNRNDSASVREVVPLAPTAYLTKPLNTEGLRQRLEGLLLERSAPVAGAVPALTPGLTLTKFLDKRRDI ADGAPLFVDVATAVTLSQTASGIDAALLEQELRNDPHITAVLIAAANTAAQHLGKPIQTMGGALAILGPVQVANIASGLG KKRMAVLTNDALLAKAHELWTLSQRTADYARILGGMLELDAERCFSAGLLQSLGDLAVLGCLQEWLLAGGQLDEQVIGQS LEQYSAAFGSALRTRWRLPLELRELIAAVYQYNTGIYTREVLAMNLAGQMARLGEEESVTTLIKTKSAKLLKLSVGDLQR LRKKLTGVTDPSLLRPLSSETEVAAEAVDDEPDLLDLAPEAPAEAPAAIEDPADAVQGPPEK
Specific function: Member Of The Two-Component Regulatory System Phoq/Phop Involved In The Regulation Of Acid Phosphatase. [C]
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49548; Mature: 49548
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTAVVLPAVPRVLIAESDPWVRETLSDLVLGVRADIELEMCTDGKQAVEWMKKHLPDLI CCCEEHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCHHHH IAARELPGIDGLSLLRGVRNLRRQPAIPFILISNRNDSASVREVVPLAPTAYLTKPLNTE HHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCHHHHCCCCCHH GLRQRLEGLLLERSAPVAGAVPALTPGLTLTKFLDKRRDIADGAPLFVDVATAVTLSQTA HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHH SGIDAALLEQELRNDPHITAVLIAAANTAAQHLGKPIQTMGGALAILGPVQVANIASGLG CCHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCHHHHCCCEEEECHHHHHHHHHHCC KKRMAVLTNDALLAKAHELWTLSQRTADYARILGGMLELDAERCFSAGLLQSLGDLAVLG CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLQEWLLAGGQLDEQVIGQSLEQYSAAFGSALRTRWRLPLELRELIAAVYQYNTGIYTRE HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHH VLAMNLAGQMARLGEEESVTTLIKTKSAKLLKLSVGDLQRLRKKLTGVTDPSLLRPLSSE HHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHCCCCCHHHHCCCCCH TEVAAEAVDDEPDLLDLAPEAPAEAPAAIEDPADAVQGPPEK HHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MMTAVVLPAVPRVLIAESDPWVRETLSDLVLGVRADIELEMCTDGKQAVEWMKKHLPDLI CCCEEHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCHHHH IAARELPGIDGLSLLRGVRNLRRQPAIPFILISNRNDSASVREVVPLAPTAYLTKPLNTE HHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCHHHHCCCCCHH GLRQRLEGLLLERSAPVAGAVPALTPGLTLTKFLDKRRDIADGAPLFVDVATAVTLSQTA HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHH SGIDAALLEQELRNDPHITAVLIAAANTAAQHLGKPIQTMGGALAILGPVQVANIASGLG CCHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCHHHHCCCEEEECHHHHHHHHHHCC KKRMAVLTNDALLAKAHELWTLSQRTADYARILGGMLELDAERCFSAGLLQSLGDLAVLG CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLQEWLLAGGQLDEQVIGQSLEQYSAAFGSALRTRWRLPLELRELIAAVYQYNTGIYTRE HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHH VLAMNLAGQMARLGEEESVTTLIKTKSAKLLKLSVGDLQRLRKKLTGVTDPSLLRPLSSE HHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHCCCCCHHHHCCCCCH TEVAAEAVDDEPDLLDLAPEAPAEAPAAIEDPADAVQGPPEK HHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA