| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is sbp [H]
Identifier: 66043355
GI number: 66043355
Start: 90266
End: 91276
Strand: Reverse
Name: sbp [H]
Synonym: Psyr_0084
Alternate gene names: 66043355
Gene position: 91276-90266 (Counterclockwise)
Preceding gene: 66043356
Following gene: 66043354
Centisome position: 1.5
GC content: 59.05
Gene sequence:
>1011_bases ATGTCCATTCGCCGTTTTGCGCTGGCGGCTCTCGCCAGTGCTGTTTTCGCAGGTTCGGCTGTCGCCAAGGATTACGAACT GCTCAACGTGTCCTACGATCCGACCCGCGAGCTGTATCAGGACTACAACGCAGAATTCGTCAATTTCTGGAAAAAATCCC ACCCGGACGACAAGGTCGAGATCAAGCAATCTCACGGCGGCTCGGGCAAGCAGGCGCGTGGCGTGATCGACGGCCTGCGT GCCGACGTGGTGACCCTGGCACTGGCCGGTGACATCGACGAAATCGCCAGGCTCGGCAAGACCCTGCCGGAAAACTGGCA GACCCGCCTGCCGGACGCGAGCACACCGTACACCTCGACCATCGTGTTTCTGGTGCGCAAGGGCAACCCGAAAGGCATCA AGGACTGGGGCGACCTGACCAAGGAAGGCGTCTCGGTGATCACCCCCAACCCGAAAACCTCGGGCGGTGCGCGCTGGAAC TTCCTGGCCGCCTGGGCCTACGGCCTGAAGGCGGGCGGCGGTGACGAAGCCAAGGCCAAGGAATACGTACAGACGCTGTT CAAGCACGTGCCGATCCTGGACACCGGCGCGCGCGGTTCGACCATCACCTTTGTCAACAACGGTCAGGGTGACGTGCTGC TGGCGTGGGAAAACGAAGCGTTTCTGGCGTTGAAAGAAGACGGCGGCAAGGACAAGTTCGACATCGTCGTACCGTCGCTG TCGATCCTTGCCGAACCTCCGGTCGCCGTGGTCGACAAGAACGCCGAGCGGAAAGGCAACAGCGAAATCGCGACTGAATA CCTCAAGCACCTGTACAGCAAGGAAGGTCAGGAAATCGCCGCGAAAAACTTCTATCGTCCACGTGATGCCGAAGTGGCCG CCAAGTACGAGAAGCAATTCCCGAAACTCGATCTGGTGACTATCGACAAAGACTTTGGTGGCTGGAAAACTGCGCAGCCG AAGTTTTTCAATGACGGCGGCGTGTTCGATCAGATTTATCAGGCGCAATAA
Upstream 100 bases:
>100_bases ACCCCCTGAAAAAAAGCAGCGCGCCCGTGCGGATGCCGTTCTGACGCGCCAAGAAGAAATCAAAAAAGCCAACACACCGT ATTTCCAGGAGCTTCAATCT
Downstream 100 bases:
>100_bases GCCGAATGAGGATGCCGCACCAGCGGCATCACAGGTTTGGCCAAACAGCCCGGATTAACCTCCGGGCTTCGTGCAAGTGA AACCAGGGACTTTTATGTCG
Product: extracellular solute-binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSIRRFALAALASAVFAGSAVAKDYELLNVSYDPTRELYQDYNAEFVNFWKKSHPDDKVEIKQSHGGSGKQARGVIDGLR ADVVTLALAGDIDEIARLGKTLPENWQTRLPDASTPYTSTIVFLVRKGNPKGIKDWGDLTKEGVSVITPNPKTSGGARWN FLAAWAYGLKAGGGDEAKAKEYVQTLFKHVPILDTGARGSTITFVNNGQGDVLLAWENEAFLALKEDGGKDKFDIVVPSL SILAEPPVAVVDKNAERKGNSEIATEYLKHLYSKEGQEIAAKNFYRPRDAEVAAKYEKQFPKLDLVTIDKDFGGWKTAQP KFFNDGGVFDQIYQAQ
Sequences:
>Translated_336_residues MSIRRFALAALASAVFAGSAVAKDYELLNVSYDPTRELYQDYNAEFVNFWKKSHPDDKVEIKQSHGGSGKQARGVIDGLR ADVVTLALAGDIDEIARLGKTLPENWQTRLPDASTPYTSTIVFLVRKGNPKGIKDWGDLTKEGVSVITPNPKTSGGARWN FLAAWAYGLKAGGGDEAKAKEYVQTLFKHVPILDTGARGSTITFVNNGQGDVLLAWENEAFLALKEDGGKDKFDIVVPSL SILAEPPVAVVDKNAERKGNSEIATEYLKHLYSKEGQEIAAKNFYRPRDAEVAAKYEKQFPKLDLVTIDKDFGGWKTAQP KFFNDGGVFDQIYQAQ >Mature_335_residues SIRRFALAALASAVFAGSAVAKDYELLNVSYDPTRELYQDYNAEFVNFWKKSHPDDKVEIKQSHGGSGKQARGVIDGLRA DVVTLALAGDIDEIARLGKTLPENWQTRLPDASTPYTSTIVFLVRKGNPKGIKDWGDLTKEGVSVITPNPKTSGGARWNF LAAWAYGLKAGGGDEAKAKEYVQTLFKHVPILDTGARGSTITFVNNGQGDVLLAWENEAFLALKEDGGKDKFDIVVPSLS ILAEPPVAVVDKNAERKGNSEIATEYLKHLYSKEGQEIAAKNFYRPRDAEVAAKYEKQFPKLDLVTIDKDFGGWKTAQPK FFNDGGVFDQIYQAQ
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=316, Percent_Identity=66.4556962025316, Blast_Score=415, Evalue=1e-117, Organism=Escherichia coli, GI1788765, Length=310, Percent_Identity=44.5161290322581, Blast_Score=270, Evalue=8e-74,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36940; Mature: 36809
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRRFALAALASAVFAGSAVAKDYELLNVSYDPTRELYQDYNAEFVNFWKKSHPDDKVE CCHHHHHHHHHHHHHHHCHHHHCCEEEEECCCCCHHHHHHHCCCHHHHHHHHCCCCCCEE IKQSHGGSGKQARGVIDGLRADVVTLALAGDIDEIARLGKTLPENWQTRLPDASTPYTST EEECCCCCCCHHHHHHHHHHHHHEEHHHHCCHHHHHHHHCCCCCCHHHCCCCCCCCCCEE IVFLVRKGNPKGIKDWGDLTKEGVSVITPNPKTSGGARWNFLAAWAYGLKAGGGDEAKAK EEEEEECCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH EYVQTLFKHVPILDTGARGSTITFVNNGQGDVLLAWENEAFLALKEDGGKDKFDIVVPSL HHHHHHHHHCCCEECCCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCCEEEEEECCH SILAEPPVAVVDKNAERKGNSEIATEYLKHLYSKEGQEIAAKNFYRPRDAEVAAKYEKQF HHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHCC PKLDLVTIDKDFGGWKTAQPKFFNDGGVFDQIYQAQ CCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure SIRRFALAALASAVFAGSAVAKDYELLNVSYDPTRELYQDYNAEFVNFWKKSHPDDKVE CHHHHHHHHHHHHHHHCHHHHCCEEEEECCCCCHHHHHHHCCCHHHHHHHHCCCCCCEE IKQSHGGSGKQARGVIDGLRADVVTLALAGDIDEIARLGKTLPENWQTRLPDASTPYTST EEECCCCCCCHHHHHHHHHHHHHEEHHHHCCHHHHHHHHCCCCCCHHHCCCCCCCCCCEE IVFLVRKGNPKGIKDWGDLTKEGVSVITPNPKTSGGARWNFLAAWAYGLKAGGGDEAKAK EEEEEECCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH EYVQTLFKHVPILDTGARGSTITFVNNGQGDVLLAWENEAFLALKEDGGKDKFDIVVPSL HHHHHHHHHCCCEECCCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCCEEEEEECCH SILAEPPVAVVDKNAERKGNSEIATEYLKHLYSKEGQEIAAKNFYRPRDAEVAAKYEKQF HHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHCC PKLDLVTIDKDFGGWKTAQPKFFNDGGVFDQIYQAQ CCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]