| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043356
Identifier: 66043356
GI number: 66043356
Start: 91428
End: 91607
Strand: Reverse
Name: 66043356
Synonym: Psyr_0085
Alternate gene names: NA
Gene position: 91607-91428 (Counterclockwise)
Preceding gene: 66043357
Following gene: 66043355
Centisome position: 1.5
GC content: 52.22
Gene sequence:
>180_bases ATGAGTGCATCTCTACGTAGTGTTGACGGTCAGGACGAAGCAGCCATTCTGCGTGAAATTCAGAGTGCGTTGCGTGACCT GCGTTTTGGTGCCGTCGAAATCACCGTGCACAACGCACAAGTGGTGCAGATCGAGCGCAAGGAAAAGTTTCGTTTGCAGA ACCCTGCCAAGCAGAACTGA
Upstream 100 bases:
>100_bases CTTTTTAAGAATATCCGCACCTCACTATTATTGCCTCACCGCCATACGCCATCGCCCCCAGTCGCGAAGGCTGGCCTCTC ACTTCTCAAGGAATAAGACA
Downstream 100 bases:
>100_bases AGCGGCAATCACCCGACTGGTCAACCGGAGGGTTTCATCCTGACTCCTGATACCCCCTGAAAAAAAGCAGCGCGCCCGTG CGGATGCCGTTCTGACGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 59; Mature: 58
Protein sequence:
>59_residues MSASLRSVDGQDEAAILREIQSALRDLRFGAVEITVHNAQVVQIERKEKFRLQNPAKQN
Sequences:
>Translated_59_residues MSASLRSVDGQDEAAILREIQSALRDLRFGAVEITVHNAQVVQIERKEKFRLQNPAKQN >Mature_58_residues SASLRSVDGQDEAAILREIQSALRDLRFGAVEITVHNAQVVQIERKEKFRLQNPAKQN
Specific function: Unknown
COG id: COG5583
COG function: function code S; Uncharacterized small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6677; Mature: 6545
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASLRSVDGQDEAAILREIQSALRDLRFGAVEITVHNAQVVQIERKEKFRLQNPAKQN CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure SASLRSVDGQDEAAILREIQSALRDLRFGAVEITVHNAQVVQIERKEKFRLQNPAKQN CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA