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The map label for this gene is algP [H]

Identifier: 66043325

GI number: 66043325

Start: 54905

End: 55921

Strand: Reverse

Name: algP [H]

Synonym: Psyr_0054

Alternate gene names: 66043325

Gene position: 55921-54905 (Counterclockwise)

Preceding gene: 161486741

Following gene: 66043323

Centisome position: 0.92

GC content: 62.83

Gene sequence:

>1017_bases
ATGTCGGCCAAAAAGAAGCCAGTAAATACTCCGTTGCATTTGCTCCAACAATTATCGGGCAGCTTGCTTGAACATCTGGA
AGACGCCTGCTCCCAAGCCTTGGCTGATGCCGAGAAACTGCTCGCCAAGCTTGAGAAACAGCGCGGCAAGGCACAGGAAA
AACTGCACAACTCCCGCATCAAGTTGCAGGATGCTGCCACCGCCGGAAAATCCAAGGCGCAGGCCAAGGCCAAAGGCGCC
GTGTCCGAGCTGGAAGAGTTGCTGGACGCTCTCAAGGATCGTCAGACCGAAACCCGCACTTACATCCTGCACCTCAAGCG
TGATGCCCAGGAAAGCCTGAAACTGGCCCAGGGTATTGGTCGCGTGAAAGAGGCGGTCGGCAAGATCCTGACTACTCGCG
ATGCCAAGCCTGTCGCACCGAAAGCGGTCGCCAAGACACCTGCTGCCAAAGCCCCGGCAAAAACCGCAGCGAAAGCGCCG
GTTAAAACAGCCGCCGCCAAGCCAGTCGCCAAGGCCGCAGCCAAGCCTTCCGCAGCTGCCAAGCCAGCCGCAAAAACTGC
TGTTGCCAAGGCCCCGGTAAAAGCCGCTGCCAAACCGGCCCCCCGGGCGACTGCAGCAGCCAAGCCTGTCGCAGCCAAGA
CAACGGCCGCCAAGCCTGCTGCAGCCAGGACAACGGCTGCTAAACCGGCCGCGGCCAAGCCTGCTGCCACCAAGGCGCCG
GTTGCCAAGACCACCGCCAGCAACGCTGCCAAACCAGCAGCAGCAAAAGCGGCGGCGGCGAAAGCGCCTGTGAAAGCGCC
CGTCAAGGCTCCGGCCAAAGCACCTGCCAAGGCACCTGTGAAAGCAGCAGCCAAGCCTGTCGCCAAACCTGCGGCCAAGC
CTGCCGTGAAGCCAGCCGCCGCCAAACCGGCCACGCCAGCGCCTGCTGCAGCCAAGCCGACAACGCCTGCACCTGCCGCG
CCAGCCGCCGCACCGGCAACACCTGCCAACGGCGCAACGCCAACCAGCGCTTCCTAA

Upstream 100 bases:

>100_bases
AGTATGCAACAGCGCCCCATGGATGCTGTCAAGATGCCCTAGCGGCGATGCGCGCAGAAGCCTAGTATGAGCCGCAATTT
CGTCACCCAGGAGGTAAGTC

Downstream 100 bases:

>100_bases
GTCTGGTCGACGGCAAGTCCAACCGCGATGCGCAGCACATGCAGCGCATCGCGGTTTTTTTCTGCGTCCACTTCGGCAAG
TTCGAGCAGCCACTCCTCTG

Product: alginate regulatory protein AlgR3

Products: NA

Alternate protein names: Alginate regulatory protein AlgR3 [H]

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSAKKKPVNTPLHLLQQLSGSLLEHLEDACSQALADAEKLLAKLEKQRGKAQEKLHNSRIKLQDAATAGKSKAQAKAKGA
VSELEELLDALKDRQTETRTYILHLKRDAQESLKLAQGIGRVKEAVGKILTTRDAKPVAPKAVAKTPAAKAPAKTAAKAP
VKTAAAKPVAKAAAKPSAAAKPAAKTAVAKAPVKAAAKPAPRATAAAKPVAAKTTAAKPAAARTTAAKPAAAKPAATKAP
VAKTTASNAAKPAAAKAAAAKAPVKAPVKAPAKAPAKAPVKAAAKPVAKPAAKPAVKPAAAKPATPAPAAAKPTTPAPAA
PAAAPATPANGATPTSAS

Sequences:

>Translated_338_residues
MSAKKKPVNTPLHLLQQLSGSLLEHLEDACSQALADAEKLLAKLEKQRGKAQEKLHNSRIKLQDAATAGKSKAQAKAKGA
VSELEELLDALKDRQTETRTYILHLKRDAQESLKLAQGIGRVKEAVGKILTTRDAKPVAPKAVAKTPAAKAPAKTAAKAP
VKTAAAKPVAKAAAKPSAAAKPAAKTAVAKAPVKAAAKPAPRATAAAKPVAAKTTAAKPAAARTTAAKPAAAKPAATKAP
VAKTTASNAAKPAAAKAAAAKAPVKAPVKAPAKAPAKAPVKAAAKPVAKPAAKPAVKPAAAKPATPAPAAAKPTTPAPAA
PAAAPATPANGATPTSAS
>Mature_337_residues
SAKKKPVNTPLHLLQQLSGSLLEHLEDACSQALADAEKLLAKLEKQRGKAQEKLHNSRIKLQDAATAGKSKAQAKAKGAV
SELEELLDALKDRQTETRTYILHLKRDAQESLKLAQGIGRVKEAVGKILTTRDAKPVAPKAVAKTPAAKAPAKTAAKAPV
KTAAAKPVAKAAAKPSAAAKPAAKTAVAKAPVKAAAKPAPRATAAAKPVAAKTTAAKPAAARTTAAKPAAAKPAATKAPV
AKTTASNAAKPAAAKAAAAKAPVKAPVKAPAKAPAKAPVKAAAKPVAKPAAKPAVKPAAAKPATPAPAAAKPTTPAPAAP
AAAPATPANGATPTSAS

Specific function: The promoter for a critical alginate biosynthetic gene, AlgD, encoding GDP-mannose dehydrogenase, is activated only under conditions reminiscent of the cystic fibrosis lung (i.e., under high osmolarity), and at least two regulatory genes, AlgP and AlgQ, h

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33420; Mature: 33289

Theoretical pI: Translated: 11.32; Mature: 11.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKKKPVNTPLHLLQQLSGSLLEHLEDACSQALADAEKLLAKLEKQRGKAQEKLHNSRI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
KLQDAATAGKSKAQAKAKGAVSELEELLDALKDRQTETRTYILHLKRDAQESLKLAQGIG
EEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RVKEAVGKILTTRDAKPVAPKAVAKTPAAKAPAKTAAKAPVKTAAAKPVAKAAAKPSAAA
HHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCHHC
KPAAKTAVAKAPVKAAAKPAPRATAAAKPVAAKTTAAKPAAARTTAAKPAAAKPAATKAP
CHHHHHHHHHCCHHHHCCCCCCHHHHCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCC
VAKTTASNAAKPAAAKAAAAKAPVKAPVKAPAKAPAKAPVKAAAKPVAKPAAKPAVKPAA
CHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
AKPATPAPAAAKPTTPAPAAPAAAPATPANGATPTSAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAKKKPVNTPLHLLQQLSGSLLEHLEDACSQALADAEKLLAKLEKQRGKAQEKLHNSRI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
KLQDAATAGKSKAQAKAKGAVSELEELLDALKDRQTETRTYILHLKRDAQESLKLAQGIG
EEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RVKEAVGKILTTRDAKPVAPKAVAKTPAAKAPAKTAAKAPVKTAAAKPVAKAAAKPSAAA
HHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCHHC
KPAAKTAVAKAPVKAAAKPAPRATAAAKPVAAKTTAAKPAAARTTAAKPAAAKPAATKAP
CHHHHHHHHHCCHHHHCCCCCCHHHHCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCC
VAKTTASNAAKPAAAKAAAAKAPVKAPVKAPAKAPAKAPVKAAAKPVAKPAAKPAVKPAA
CHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
AKPATPAPAAAKPTTPAPAAPAAAPATPANGATPTSAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2514124; 2109318; 1698761; 2110144; 10984043 [H]