Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is yheS [H]

Identifier: 66043323

GI number: 66043323

Start: 52475

End: 54385

Strand: Reverse

Name: yheS [H]

Synonym: Psyr_0052

Alternate gene names: 66043323

Gene position: 54385-52475 (Counterclockwise)

Preceding gene: 66043325

Following gene: 66043322

Centisome position: 0.89

GC content: 63.32

Gene sequence:

>1911_bases
ATGATTCGACTTCAAAGCCTTACCTTACAGCGTGGTCCGCAACGTCTGCTAGAAGACGCCGAGCTGACTCTGCACGCCGG
CCATAAAGCCGGTCTGATCGGTGCCAATGGCGCCGGTAAATCCAGCCTGTTTGCCCTGCTGCGTGGAGAGCTGACGCCGG
ACGCCGGCGACTGCCTGCTGCCCGCCGACTGGCGTATCGCGCACATGCGCCAGGAGGTCGACACGCTCGAACGCCTGGCC
GTGGATTACGTGCTCGATGGCGACGAGCGCCTGCGCGAGGTACAGAGCTCGCTGGCCGAGGCCGAAGCCGCGCAGGACGG
TGCCGCTCAGGCCCGTCTGCATTCGGAGCTCGACAGCGCCGACGGTTATACCGCCGACGCACGCGCTCGCAAGCTGCTGG
CCGGGCTGGGCTTCACCAACGAACAGATGGAGCGTCAGGTCGGCAGTTTCTCCGGTGGCTGGCGTATGCGCCTGAACCTG
GCGCAGGCATTGATGTGCCCCTCGGACCTGCTGCTGCTCGACGAACCGACCAACCACTTGGACCTCGACGCCATTCTGTG
GCTTGAAGACTGGCTCAAGAGTTACCCCGGCACCTTGCTGCTGATTTCCCACGACCGGGATTTTCTGGATGCCGTGGTCG
ATCACATCGCCCATGTCGAGCAACGCAGGATCACTCTCTATCGCGGCGGCTACAGCGCCTTCGAGCGGGCTCGTGCCGAA
CGTCTGGCCCAGCAGCAACAGGCCTACGAGAAGCAGCAGGCGCAACGTGCGCACATGGAAAAGTACATCGCGCGCTTCAA
GGCCCAGGCCACCAAGGCCCGTCAGGCACAAAGCCGGATCAAGGCGCTGGAACGCATGGAAGAGCTGTCGGCCGCGCACG
TCGACTCTCCGTTCAACTTCGTCTTCCGTGAGTCCGACAAGATCTCCAGCCCCTTGCTGGACCTGTCCGATGCGCGCCTG
GGTTACGGCGACAAGACCATCCTCGAGAAGGTCAAGCTGCAACTCACGCCCGGTGCACGCATCGGCCTGCTGGGTCCGAA
CGGCGCAGGCAAGTCGACGCTGATCAAAAACCTCGCCGGCGAGCTTGAGCCGCAAAGCGGTCGGCTGGTGCGTGGCGAAA
ACCTCACCGTGGGCTACTTCGCCCAGCATCAGCTCGACTCACTGGACGCCAAGGCGACGCCGTTGCTGCACCTGCAGCGC
CTGGCACCGACCGAGCGTGAACAGACCTTGCGCGATTTCCTGGGCGGTTTCGACTTCCGTGGCGCGCGTCTGGATGAGCC
GGTGCTGAATTTCTCCGGTGGCGAGAAAGCCCGTCTGGCGCTGGCGCTGATTGCCTGGGAAAAGCCCAATCTGTTGCTGC
TCGATGAACCGACCAACCACCTCGACCTGGAGATGCGCCTGGCGCTGACCATGGCCTTGCAGGAGTTCGGTGGCGCGGTA
CTGGTGGTGTCTCACGATCGGCACTTGCTCAAGAGCACGACCGATGACTTCCTGCTGGTGGCCGACGGCCGCGTGCAGGC
GTTCGACGGCGATCTGGATGACTACACGCGCTGGCTGGCCGATTACCGGCTGCGCAACGCTCCGGTCAGCAACACGCCCG
TCAACGCCGACAAGACCGATAAGAAAGCCCAGCGCCAGCAGGCAGCGGCCTTGCGTCAGCAACTGGCGCCGCACAAGCGC
GAAGCCGACAAGCTGGAGCGTGATCTCGGGCTGGTGAATGAGAAACTCGCCAAGGTCGAAGAAGCGCTGGCTGACAGCAC
CAACTACGAGGCGGCCAACAAGGACAAGCTGCGCGATCTGCTGGCCGAACAGGCGAAGCTGAAAGTGCGCGAAGCCGAGC
TGGAAGACGCCTGGATGCAAGCGCTGGAACTGTTGGAATCAATGCAGGCCGAACTGGAAGCATTGTCGTGA

Upstream 100 bases:

>100_bases
CACACCCGGTCGGGCGTAGAAATCGAGGGTGAAACTCCAGAGCGCTGAAGGCATAGTGATCCACCTGTTCAGGACGAAGC
TGGTAGACTCCGCCGCCATT

Downstream 100 bases:

>100_bases
GTGAGGCAGGGAAGTGATGGACATGTTGGGCTTGCCGGTATCCGCGTACTGGCTTGAACCGCTGCTGGTGGGTGCGCAGA
TTCTGCTGATCCTGCTGGCC

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 636; Mature: 636

Protein sequence:

>636_residues
MIRLQSLTLQRGPQRLLEDAELTLHAGHKAGLIGANGAGKSSLFALLRGELTPDAGDCLLPADWRIAHMRQEVDTLERLA
VDYVLDGDERLREVQSSLAEAEAAQDGAAQARLHSELDSADGYTADARARKLLAGLGFTNEQMERQVGSFSGGWRMRLNL
AQALMCPSDLLLLDEPTNHLDLDAILWLEDWLKSYPGTLLLISHDRDFLDAVVDHIAHVEQRRITLYRGGYSAFERARAE
RLAQQQQAYEKQQAQRAHMEKYIARFKAQATKARQAQSRIKALERMEELSAAHVDSPFNFVFRESDKISSPLLDLSDARL
GYGDKTILEKVKLQLTPGARIGLLGPNGAGKSTLIKNLAGELEPQSGRLVRGENLTVGYFAQHQLDSLDAKATPLLHLQR
LAPTEREQTLRDFLGGFDFRGARLDEPVLNFSGGEKARLALALIAWEKPNLLLLDEPTNHLDLEMRLALTMALQEFGGAV
LVVSHDRHLLKSTTDDFLLVADGRVQAFDGDLDDYTRWLADYRLRNAPVSNTPVNADKTDKKAQRQQAAALRQQLAPHKR
EADKLERDLGLVNEKLAKVEEALADSTNYEAANKDKLRDLLAEQAKLKVREAELEDAWMQALELLESMQAELEALS

Sequences:

>Translated_636_residues
MIRLQSLTLQRGPQRLLEDAELTLHAGHKAGLIGANGAGKSSLFALLRGELTPDAGDCLLPADWRIAHMRQEVDTLERLA
VDYVLDGDERLREVQSSLAEAEAAQDGAAQARLHSELDSADGYTADARARKLLAGLGFTNEQMERQVGSFSGGWRMRLNL
AQALMCPSDLLLLDEPTNHLDLDAILWLEDWLKSYPGTLLLISHDRDFLDAVVDHIAHVEQRRITLYRGGYSAFERARAE
RLAQQQQAYEKQQAQRAHMEKYIARFKAQATKARQAQSRIKALERMEELSAAHVDSPFNFVFRESDKISSPLLDLSDARL
GYGDKTILEKVKLQLTPGARIGLLGPNGAGKSTLIKNLAGELEPQSGRLVRGENLTVGYFAQHQLDSLDAKATPLLHLQR
LAPTEREQTLRDFLGGFDFRGARLDEPVLNFSGGEKARLALALIAWEKPNLLLLDEPTNHLDLEMRLALTMALQEFGGAV
LVVSHDRHLLKSTTDDFLLVADGRVQAFDGDLDDYTRWLADYRLRNAPVSNTPVNADKTDKKAQRQQAAALRQQLAPHKR
EADKLERDLGLVNEKLAKVEEALADSTNYEAANKDKLRDLLAEQAKLKVREAELEDAWMQALELLESMQAELEALS
>Mature_636_residues
MIRLQSLTLQRGPQRLLEDAELTLHAGHKAGLIGANGAGKSSLFALLRGELTPDAGDCLLPADWRIAHMRQEVDTLERLA
VDYVLDGDERLREVQSSLAEAEAAQDGAAQARLHSELDSADGYTADARARKLLAGLGFTNEQMERQVGSFSGGWRMRLNL
AQALMCPSDLLLLDEPTNHLDLDAILWLEDWLKSYPGTLLLISHDRDFLDAVVDHIAHVEQRRITLYRGGYSAFERARAE
RLAQQQQAYEKQQAQRAHMEKYIARFKAQATKARQAQSRIKALERMEELSAAHVDSPFNFVFRESDKISSPLLDLSDARL
GYGDKTILEKVKLQLTPGARIGLLGPNGAGKSTLIKNLAGELEPQSGRLVRGENLTVGYFAQHQLDSLDAKATPLLHLQR
LAPTEREQTLRDFLGGFDFRGARLDEPVLNFSGGEKARLALALIAWEKPNLLLLDEPTNHLDLEMRLALTMALQEFGGAV
LVVSHDRHLLKSTTDDFLLVADGRVQAFDGDLDDYTRWLADYRLRNAPVSNTPVNADKTDKKAQRQQAAALRQQLAPHKR
EADKLERDLGLVNEKLAKVEEALADSTNYEAANKDKLRDLLAEQAKLKVREAELEDAWMQALELLESMQAELEALS

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=524, Percent_Identity=37.7862595419847, Blast_Score=346, Evalue=4e-95,
Organism=Homo sapiens, GI10947137, Length=527, Percent_Identity=35.673624288425, Blast_Score=315, Evalue=8e-86,
Organism=Homo sapiens, GI27881506, Length=527, Percent_Identity=35.673624288425, Blast_Score=315, Evalue=9e-86,
Organism=Homo sapiens, GI69354671, Length=541, Percent_Identity=34.9353049907579, Blast_Score=261, Evalue=1e-69,
Organism=Homo sapiens, GI10947135, Length=541, Percent_Identity=34.9353049907579, Blast_Score=261, Evalue=2e-69,
Organism=Homo sapiens, GI108773784, Length=489, Percent_Identity=25.3578732106339, Blast_Score=93, Evalue=1e-18,
Organism=Homo sapiens, GI108773782, Length=489, Percent_Identity=25.3578732106339, Blast_Score=93, Evalue=1e-18,
Organism=Escherichia coli, GI1789751, Length=630, Percent_Identity=55.0793650793651, Blast_Score=689, Evalue=0.0,
Organism=Escherichia coli, GI1787041, Length=527, Percent_Identity=35.8633776091082, Blast_Score=323, Evalue=3e-89,
Organism=Escherichia coli, GI2367384, Length=528, Percent_Identity=32.7651515151515, Blast_Score=254, Evalue=1e-68,
Organism=Escherichia coli, GI1787182, Length=634, Percent_Identity=28.8643533123028, Blast_Score=231, Evalue=1e-61,
Organism=Escherichia coli, GI1788165, Length=198, Percent_Identity=34.8484848484849, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI87081782, Length=544, Percent_Identity=26.2867647058824, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1787758, Length=241, Percent_Identity=27.8008298755187, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI48994997, Length=255, Percent_Identity=28.6274509803922, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87081709, Length=232, Percent_Identity=25.8620689655172, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1789672, Length=219, Percent_Identity=28.310502283105, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1789891, Length=206, Percent_Identity=28.1553398058252, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1788506, Length=556, Percent_Identity=23.3812949640288, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1786698, Length=195, Percent_Identity=30.7692307692308, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789873, Length=217, Percent_Identity=29.0322580645161, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87081791, Length=348, Percent_Identity=24.4252873563218, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1787029, Length=221, Percent_Identity=25.3393665158371, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=530, Percent_Identity=37.1698113207547, Blast_Score=338, Evalue=4e-93,
Organism=Caenorhabditis elegans, GI17555318, Length=524, Percent_Identity=34.9236641221374, Blast_Score=312, Evalue=3e-85,
Organism=Caenorhabditis elegans, GI17559834, Length=554, Percent_Identity=32.129963898917, Blast_Score=308, Evalue=5e-84,
Organism=Caenorhabditis elegans, GI17555800, Length=196, Percent_Identity=30.1020408163265, Blast_Score=67, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=558, Percent_Identity=37.0967741935484, Blast_Score=351, Evalue=2e-97,
Organism=Saccharomyces cerevisiae, GI6320874, Length=531, Percent_Identity=34.8399246704331, Blast_Score=308, Evalue=3e-84,
Organism=Saccharomyces cerevisiae, GI6325030, Length=387, Percent_Identity=33.0749354005168, Blast_Score=173, Evalue=6e-44,
Organism=Saccharomyces cerevisiae, GI6324314, Length=412, Percent_Identity=27.6699029126214, Blast_Score=154, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6323278, Length=418, Percent_Identity=27.7511961722488, Blast_Score=144, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24666836, Length=527, Percent_Identity=38.7096774193548, Blast_Score=363, Evalue=1e-100,
Organism=Drosophila melanogaster, GI24642252, Length=527, Percent_Identity=37.5711574952562, Blast_Score=348, Evalue=5e-96,
Organism=Drosophila melanogaster, GI18859989, Length=527, Percent_Identity=37.5711574952562, Blast_Score=348, Evalue=5e-96,
Organism=Drosophila melanogaster, GI24641342, Length=540, Percent_Identity=35.1851851851852, Blast_Score=316, Evalue=4e-86,
Organism=Drosophila melanogaster, GI116007184, Length=216, Percent_Identity=28.7037037037037, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI221500365, Length=216, Percent_Identity=28.7037037037037, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24661270, Length=194, Percent_Identity=30.4123711340206, Blast_Score=67, Evalue=5e-11,
Organism=Drosophila melanogaster, GI21355589, Length=194, Percent_Identity=30.4123711340206, Blast_Score=67, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 70912; Mature: 70912

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLQSLTLQRGPQRLLEDAELTLHAGHKAGLIGANGAGKSSLFALLRGELTPDAGDCLL
CEEECHHHHHCCHHHHHCCCCEEEECCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCEEC
PADWRIAHMRQEVDTLERLAVDYVLDGDERLREVQSSLAEAEAAQDGAAQARLHSELDSA
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC
DGYTADARARKLLAGLGFTNEQMERQVGSFSGGWRMRLNLAQALMCPSDLLLLDEPTNHL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCEEEEECCCCCC
DLDAILWLEDWLKSYPGTLLLISHDRDFLDAVVDHIAHVEQRRITLYRGGYSAFERARAE
CHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHH
RLAQQQQAYEKQQAQRAHMEKYIARFKAQATKARQAQSRIKALERMEELSAAHVDSPFNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
VFRESDKISSPLLDLSDARLGYGDKTILEKVKLQLTPGARIGLLGPNGAGKSTLIKNLAG
EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHH
ELEPQSGRLVRGENLTVGYFAQHQLDSLDAKATPLLHLQRLAPTEREQTLRDFLGGFDFR
CCCCCCCCEEECCCCEEEEHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCC
GARLDEPVLNFSGGEKARLALALIAWEKPNLLLLDEPTNHLDLEMRLALTMALQEFGGAV
CCCCCCCCCCCCCCCHHEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEE
LVVSHDRHLLKSTTDDFLLVADGRVQAFDGDLDDYTRWLADYRLRNAPVSNTPVNADKTD
EEEECCCHHHHCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
KKAQRQQAAALRQQLAPHKREADKLERDLGLVNEKLAKVEEALADSTNYEAANKDKLRDL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LAEQAKLKVREAELEDAWMQALELLESMQAELEALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRLQSLTLQRGPQRLLEDAELTLHAGHKAGLIGANGAGKSSLFALLRGELTPDAGDCLL
CEEECHHHHHCCHHHHHCCCCEEEECCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCEEC
PADWRIAHMRQEVDTLERLAVDYVLDGDERLREVQSSLAEAEAAQDGAAQARLHSELDSA
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC
DGYTADARARKLLAGLGFTNEQMERQVGSFSGGWRMRLNLAQALMCPSDLLLLDEPTNHL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCEEEEECCCCCC
DLDAILWLEDWLKSYPGTLLLISHDRDFLDAVVDHIAHVEQRRITLYRGGYSAFERARAE
CHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHH
RLAQQQQAYEKQQAQRAHMEKYIARFKAQATKARQAQSRIKALERMEELSAAHVDSPFNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
VFRESDKISSPLLDLSDARLGYGDKTILEKVKLQLTPGARIGLLGPNGAGKSTLIKNLAG
EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHH
ELEPQSGRLVRGENLTVGYFAQHQLDSLDAKATPLLHLQRLAPTEREQTLRDFLGGFDFR
CCCCCCCCEEECCCCEEEEHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCC
GARLDEPVLNFSGGEKARLALALIAWEKPNLLLLDEPTNHLDLEMRLALTMALQEFGGAV
CCCCCCCCCCCCCCCHHEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEE
LVVSHDRHLLKSTTDDFLLVADGRVQAFDGDLDDYTRWLADYRLRNAPVSNTPVNADKTD
EEEECCCHHHHCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
KKAQRQQAAALRQQLAPHKREADKLERDLGLVNEKLAKVEEALADSTNYEAANKDKLRDL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LAEQAKLKVREAELEDAWMQALELLESMQAELEALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]