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The map label for this gene is 66043322

Identifier: 66043322

GI number: 66043322

Start: 51865

End: 52458

Strand: Reverse

Name: 66043322

Synonym: Psyr_0051

Alternate gene names: NA

Gene position: 52458-51865 (Counterclockwise)

Preceding gene: 66043323

Following gene: 66043321

Centisome position: 0.86

GC content: 62.96

Gene sequence:

>594_bases
ATGGACATGTTGGGCTTGCCGGTATCCGCGTACTGGCTTGAACCGCTGCTGGTGGGTGCGCAGATTCTGCTGATCCTGCT
GGCCGGTTACGTACTGCAACGCATCGTGGGTGGTTTTCTGACCGGGCTGGGCGAGCGCTATCCGTTGCCGCCAGAATTGC
TGGTGCCGGTTCGCGGAGGCCTGCGCTGGTTGATCATGGGCAGCGCCTTTGTCCTCGTCCTGGGTCGACTCGGGGTGTCG
GCCACGGTGCTGTGGACTGCACTGTCCGGCTTCGTCGCCGTCGCGGCGGTGGCGTTCTTCGCCATGTGGAGCGTGCTGTC
GAACCTGCTCTGCGCCATTCTGATCTTCACCATCGGCCCGTTCCGCATCGGTGACATGGTCGAGCTGGTCGATACGCTGG
ACAAGCCGGGCGTGAAGGGCAGGGTGGTTGCCATCAACCTGATGTTCACCACCCTGATCGAGACCCCGGAAGCCGGTGGT
GCGCTGGTCCAGGTGCCCAACAGCCAGTTTTTCCAGAAGTCGGTGCGCCGTTGGCGTGGCAGCGATCTGTTTCCGCAGAT
GGTGGTCGCAAAGCAGCCGGACGAGCAGGATTAG

Upstream 100 bases:

>100_bases
CGCGAAGCCGAGCTGGAAGACGCCTGGATGCAAGCGCTGGAACTGTTGGAATCAATGCAGGCCGAACTGGAAGCATTGTC
GTGAGTGAGGCAGGGAAGTG

Downstream 100 bases:

>100_bases
AAATCGTTAGCTTTGCAAAGCAACCCGCATTAATTTACTGAGCATTGGACTTTGCTTGAGGTGCACGATGGCGCTTGAAA
CGTGGCTGGGCTTTTTTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Small-Conductance Mechanosensitive Channel Protein; Small-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MDMLGLPVSAYWLEPLLVGAQILLILLAGYVLQRIVGGFLTGLGERYPLPPELLVPVRGGLRWLIMGSAFVLVLGRLGVS
ATVLWTALSGFVAVAAVAFFAMWSVLSNLLCAILIFTIGPFRIGDMVELVDTLDKPGVKGRVVAINLMFTTLIETPEAGG
ALVQVPNSQFFQKSVRRWRGSDLFPQMVVAKQPDEQD

Sequences:

>Translated_197_residues
MDMLGLPVSAYWLEPLLVGAQILLILLAGYVLQRIVGGFLTGLGERYPLPPELLVPVRGGLRWLIMGSAFVLVLGRLGVS
ATVLWTALSGFVAVAAVAFFAMWSVLSNLLCAILIFTIGPFRIGDMVELVDTLDKPGVKGRVVAINLMFTTLIETPEAGG
ALVQVPNSQFFQKSVRRWRGSDLFPQMVVAKQPDEQD
>Mature_197_residues
MDMLGLPVSAYWLEPLLVGAQILLILLAGYVLQRIVGGFLTGLGERYPLPPELLVPVRGGLRWLIMGSAFVLVLGRLGVS
ATVLWTALSGFVAVAAVAFFAMWSVLSNLLCAILIFTIGPFRIGDMVELVDTLDKPGVKGRVVAINLMFTTLIETPEAGG
ALVQVPNSQFFQKSVRRWRGSDLFPQMVVAKQPDEQD

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21399; Mature: 21399

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMLGLPVSAYWLEPLLVGAQILLILLAGYVLQRIVGGFLTGLGERYPLPPELLVPVRGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCC
LRWLIMGSAFVLVLGRLGVSATVLWTALSGFVAVAAVAFFAMWSVLSNLLCAILIFTIGP
EEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FRIGDMVELVDTLDKPGVKGRVVAINLMFTTLIETPEAGGALVQVPNSQFFQKSVRRWRG
CCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHCC
SDLFPQMVVAKQPDEQD
CCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MDMLGLPVSAYWLEPLLVGAQILLILLAGYVLQRIVGGFLTGLGERYPLPPELLVPVRGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCC
LRWLIMGSAFVLVLGRLGVSATVLWTALSGFVAVAAVAFFAMWSVLSNLLCAILIFTIGP
EEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FRIGDMVELVDTLDKPGVKGRVVAINLMFTTLIETPEAGGALVQVPNSQFFQKSVRRWRG
CCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHCC
SDLFPQMVVAKQPDEQD
CCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA