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The map label for this gene is 66043291

Identifier: 66043291

GI number: 66043291

Start: 23672

End: 24697

Strand: Direct

Name: 66043291

Synonym: Psyr_0020

Alternate gene names: NA

Gene position: 23672-24697 (Clockwise)

Preceding gene: 66043285

Following gene: 66043292

Centisome position: 0.39

GC content: 61.31

Gene sequence:

>1026_bases
ATGAGGAAATCACTACTCGCCCTGCTGCTGCTGACCGCCAGCGGTCTTGCGCAGGCGCAAGTGCAACTCAGGGAAGGCTA
TCCACAGAGCTACACCGTTGTCGCCGGGGACACACTCTGGGACATTTCCGGCAAGTTCTTGCGTGAACCGTGGAAATGGC
GCGAGATCTGGCGGGCCAATCCGCAAGTCCATGATCCTGACCTGATCTACCCCGGTGACACCCTCGCGCTAACCTGGGTC
AATGGTCAGCCGCGCGTGACGCTCAATCGCGGCCAGTCGCGTGGCACCATCAAATTGTCACCGCGGGTGCGCAGTACGCC
GATGGTCGAGGCCATTCCGAGCATTCCGCTGGGCGCGATCAACGCTTTCCTGATCAACAATCGGATTGTCGACAGCGCCG
AGCAGTTCGAAAAAGCCCCCTACATCGTTGCGGGCAATGCCGAGCGCGTGCTCAGTGGCAACGGTGATCGCGCCTATGCA
CGGGGCGCGCTGGACCCGGCGCACAGCGTCTATGGCATCTTCCGTCAGGGCAAGACCTACGTCGACCCCAAGACCCAGGA
AGTGCTGGGGATCAATGCCGATGACGTCGGCAGCGCCGAGGTGGTTGCCACCGAGGGTGACGTCTCGACCCTGATTCTGC
AGCGCTCCACACAGGAAGTGCGTCTGGGCGATCGTTTATTCAGCAGCGAAGAGCGGGCTATAAACTCGACGTTCCTGCCC
AGCGCCCCGCAGGCGCCGATAGACGGTTTGATTCTGGATGTGCCACGCGGCGTCACCCAGGTCAGCGTGCTGGATGTGGT
CACGCTCGACAAGGGCAAACGCGACGGCCTGACCGAGGGCAACGTGCTGGCGATCTACAAGACCAGCGAGACCGTGCGCG
ACCGGATCACCGGTGAACAGGTAAAGATCCCCGACGAACGGGCCGGCCTGCTGATGGTTTTCCGTACCTACGACAAGCTT
AGTTACGCCTTGGTCCTGCAAGCCAACCGATCTTTGGCCATCATGGACAAGGTTCGCAACCCGTAG

Upstream 100 bases:

>100_bases
TAAAGTCAATGTTGGGTGCCGGGCCCGGGAGTTCAAGGCAGGCAGCCCAGGACAGGACTCTAGGGTTCGCGTGAGGCAAC
ATGATAAAGGGATTCACCGC

Downstream 100 bases:

>100_bases
ACGCATGTTTCAGATCTGACACGGAATTGTGCGACGAACCAGACACTTATCAAATTGTTGTCAACAGAGTTATCCACAGG
TTTGTGCAGCCCTCGGGATG

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: LysM Domain Protein; Cell Wall Degradation; LysM Motif-Containing Protein; Protein Containing LysM Domain; Signal Peptide Protein; LysM Family Cell Wall Degradation Protein; Lysin Domain-Containing Protein; Lysm Domain Protein; Signal Peptide Protein LysM Domain Protein; Secreted Protein

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MRKSLLALLLLTASGLAQAQVQLREGYPQSYTVVAGDTLWDISGKFLREPWKWREIWRANPQVHDPDLIYPGDTLALTWV
NGQPRVTLNRGQSRGTIKLSPRVRSTPMVEAIPSIPLGAINAFLINNRIVDSAEQFEKAPYIVAGNAERVLSGNGDRAYA
RGALDPAHSVYGIFRQGKTYVDPKTQEVLGINADDVGSAEVVATEGDVSTLILQRSTQEVRLGDRLFSSEERAINSTFLP
SAPQAPIDGLILDVPRGVTQVSVLDVVTLDKGKRDGLTEGNVLAIYKTSETVRDRITGEQVKIPDERAGLLMVFRTYDKL
SYALVLQANRSLAIMDKVRNP

Sequences:

>Translated_341_residues
MRKSLLALLLLTASGLAQAQVQLREGYPQSYTVVAGDTLWDISGKFLREPWKWREIWRANPQVHDPDLIYPGDTLALTWV
NGQPRVTLNRGQSRGTIKLSPRVRSTPMVEAIPSIPLGAINAFLINNRIVDSAEQFEKAPYIVAGNAERVLSGNGDRAYA
RGALDPAHSVYGIFRQGKTYVDPKTQEVLGINADDVGSAEVVATEGDVSTLILQRSTQEVRLGDRLFSSEERAINSTFLP
SAPQAPIDGLILDVPRGVTQVSVLDVVTLDKGKRDGLTEGNVLAIYKTSETVRDRITGEQVKIPDERAGLLMVFRTYDKL
SYALVLQANRSLAIMDKVRNP
>Mature_341_residues
MRKSLLALLLLTASGLAQAQVQLREGYPQSYTVVAGDTLWDISGKFLREPWKWREIWRANPQVHDPDLIYPGDTLALTWV
NGQPRVTLNRGQSRGTIKLSPRVRSTPMVEAIPSIPLGAINAFLINNRIVDSAEQFEKAPYIVAGNAERVLSGNGDRAYA
RGALDPAHSVYGIFRQGKTYVDPKTQEVLGINADDVGSAEVVATEGDVSTLILQRSTQEVRLGDRLFSSEERAINSTFLP
SAPQAPIDGLILDVPRGVTQVSVLDVVTLDKGKRDGLTEGNVLAIYKTSETVRDRITGEQVKIPDERAGLLMVFRTYDKL
SYALVLQANRSLAIMDKVRNP

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37506; Mature: 37506

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSLLALLLLTASGLAQAQVQLREGYPQSYTVVAGDTLWDISGKFLREPWKWREIWRAN
CCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCEEEECCCHHHHCCHHHHHHHCCC
PQVHDPDLIYPGDTLALTWVNGQPRVTLNRGQSRGTIKLSPRVRSTPMVEAIPSIPLGAI
CCCCCCCEEECCCEEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCHHHHCCCCCHHHH
NAFLINNRIVDSAEQFEKAPYIVAGNAERVLSGNGDRAYARGALDPAHSVYGIFRQGKTY
EEEEECCCHHCCHHHHHCCCEEEECCCCEEECCCCCCEEECCCCCHHHHHHHHHHCCCEE
VDPKTQEVLGINADDVGSAEVVATEGDVSTLILQRSTQEVRLGDRLFSSEERAINSTFLP
CCCCCCEEEECCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHCCHHHHCCCCCCC
SAPQAPIDGLILDVPRGVTQVSVLDVVTLDKGKRDGLTEGNVLAIYKTSETVRDRITGEQ
CCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHCCCCE
VKIPDERAGLLMVFRTYDKLSYALVLQANRSLAIMDKVRNP
EECCCCCCCEEEEEEECCCCEEEEEEECCCCEEEEHHCCCC
>Mature Secondary Structure
MRKSLLALLLLTASGLAQAQVQLREGYPQSYTVVAGDTLWDISGKFLREPWKWREIWRAN
CCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCEEEECCCHHHHCCHHHHHHHCCC
PQVHDPDLIYPGDTLALTWVNGQPRVTLNRGQSRGTIKLSPRVRSTPMVEAIPSIPLGAI
CCCCCCCEEECCCEEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCHHHHCCCCCHHHH
NAFLINNRIVDSAEQFEKAPYIVAGNAERVLSGNGDRAYARGALDPAHSVYGIFRQGKTY
EEEEECCCHHCCHHHHHCCCEEEECCCCEEECCCCCCEEECCCCCHHHHHHHHHHCCCEE
VDPKTQEVLGINADDVGSAEVVATEGDVSTLILQRSTQEVRLGDRLFSSEERAINSTFLP
CCCCCCEEEECCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHCCHHHHCCCCCCC
SAPQAPIDGLILDVPRGVTQVSVLDVVTLDKGKRDGLTEGNVLAIYKTSETVRDRITGEQ
CCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHCCCCE
VKIPDERAGLLMVFRTYDKLSYALVLQANRSLAIMDKVRNP
EECCCCCCCEEEEEEECCCCEEEEEEECCCCEEEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA