| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is plsC [H]
Identifier: 66043280
GI number: 66043280
Start: 10525
End: 11295
Strand: Reverse
Name: plsC [H]
Synonym: Psyr_0009
Alternate gene names: 66043280
Gene position: 11295-10525 (Counterclockwise)
Preceding gene: 66043281
Following gene: 66043278
Centisome position: 0.19
GC content: 57.98
Gene sequence:
>771_bases ATGTCGATCATGCAGGCAATCAGGACCTTCTTCTTTTACCTGTTGCTGGGCACCAGCTCGCTGCTGTGGTGCACATTGAG TTTTTTCATTGCGCCTTTTCTGCCGTTCAAAGCCCGCTATCGCTTCATCAACGTCTACTGGTGCCGCTGCGCCATCTGGC TGACCAAGGTGTTTCTGAACATCAAGGTTGAAGTAACTGGCGCCGAGAACGTACCGAAAACCCCCTGCGTGATCATCTCC AACCATCAGAGCACCTGGGAGACCTTCTTTCTGTCGGCGTATTTCGAGCCGATGAGTCAGGTCCTCAAGCGTGAACTGCT GTACGTGCCGTTCTTTGGCTGGGCGATGGCAATGCTGCGCCCGATCGCTATCGACCGCGAAAACCCGAAAGCCGCACTCA GGGAGATTGCCAAGAAGGGCGACGAGCTGCTCAAGGATGGCGTCTGGGTGTTGATCTTCCCGGAGGGCACACGCGTGCCT TACGGCCAGGTCGGCAAATTCTCACGCGGTGGAACTGCACTGGCAGTGAACGCCGACCTGCCCGTGCTGCCTGTCGCGCA CAACGCAGGCAAGTATTGGCCTCGCGACGGCTGGGCGAAAAAGCCAGGTACCATTCAGGTGGTGATCGGCGAGCCGATGT ATGCAGAAGGCACAGGCCCACGTGCCATTGCTGCGTTGAATGAGCGTGTGCAGGCCTGGAATGAAGACACACAACGCGCA ATGGGTTCGCCTGTCGAGCCTGCAGCCACCCCCGAAAAAGTCCCGGCGTGA
Upstream 100 bases:
>100_bases TTGCCGCAGAACTTATCCACAACAGCACTCACTGAACAATCAGCTCTTCAGGTTCAGGACGCTCAAGGAGCGGGCACCTG CCCGTACGGTAAACGTAACT
Downstream 100 bases:
>100_bases TTTTGTGGATAACCTGTGTACGGTTTTTCTGAAATCGCTGAAAAAGACTGTCTAACCTGTTAATTCGTATACATATTTTT TCAGGCTATAAAAACCGGAA
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSIMQAIRTFFFYLLLGTSSLLWCTLSFFIAPFLPFKARYRFINVYWCRCAIWLTKVFLNIKVEVTGAENVPKTPCVIIS NHQSTWETFFLSAYFEPMSQVLKRELLYVPFFGWAMAMLRPIAIDRENPKAALREIAKKGDELLKDGVWVLIFPEGTRVP YGQVGKFSRGGTALAVNADLPVLPVAHNAGKYWPRDGWAKKPGTIQVVIGEPMYAEGTGPRAIAALNERVQAWNEDTQRA MGSPVEPAATPEKVPA
Sequences:
>Translated_256_residues MSIMQAIRTFFFYLLLGTSSLLWCTLSFFIAPFLPFKARYRFINVYWCRCAIWLTKVFLNIKVEVTGAENVPKTPCVIIS NHQSTWETFFLSAYFEPMSQVLKRELLYVPFFGWAMAMLRPIAIDRENPKAALREIAKKGDELLKDGVWVLIFPEGTRVP YGQVGKFSRGGTALAVNADLPVLPVAHNAGKYWPRDGWAKKPGTIQVVIGEPMYAEGTGPRAIAALNERVQAWNEDTQRA MGSPVEPAATPEKVPA >Mature_255_residues SIMQAIRTFFFYLLLGTSSLLWCTLSFFIAPFLPFKARYRFINVYWCRCAIWLTKVFLNIKVEVTGAENVPKTPCVIISN HQSTWETFFLSAYFEPMSQVLKRELLYVPFFGWAMAMLRPIAIDRENPKAALREIAKKGDELLKDGVWVLIFPEGTRVPY GQVGKFSRGGTALAVNADLPVLPVAHNAGKYWPRDGWAKKPGTIQVVIGEPMYAEGTGPRAIAALNERVQAWNEDTQRAM GSPVEPAATPEKVPA
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=195, Percent_Identity=32.3076923076923, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI15100175, Length=195, Percent_Identity=32.3076923076923, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI6041665, Length=207, Percent_Identity=28.0193236714976, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17564032, Length=161, Percent_Identity=31.055900621118, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6320151, Length=260, Percent_Identity=29.6153846153846, Blast_Score=100, Evalue=3e-22, Organism=Drosophila melanogaster, GI24641614, Length=196, Percent_Identity=28.0612244897959, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24641612, Length=196, Percent_Identity=28.0612244897959, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI281364648, Length=231, Percent_Identity=26.4069264069264, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24582856, Length=231, Percent_Identity=26.4069264069264, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24582854, Length=231, Percent_Identity=26.4069264069264, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 28779; Mature: 28648
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIMQAIRTFFFYLLLGTSSLLWCTLSFFIAPFLPFKARYRFINVYWCRCAIWLTKVFLN CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHEEEHHHHHHHHHHHHHHHHE IKVEVTGAENVPKTPCVIISNHQSTWETFFLSAYFEPMSQVLKRELLYVPFFGWAMAMLR EEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH PIAIDRENPKAALREIAKKGDELLKDGVWVLIFPEGTRVPYGQVGKFSRGGTALAVNADL HHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCC PVLPVAHNAGKYWPRDGWAKKPGTIQVVIGEPMYAEGTGPRAIAALNERVQAWNEDTQRA CEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHCCHHHHHH MGSPVEPAATPEKVPA CCCCCCCCCCCCCCCC >Mature Secondary Structure SIMQAIRTFFFYLLLGTSSLLWCTLSFFIAPFLPFKARYRFINVYWCRCAIWLTKVFLN HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHEEEHHHHHHHHHHHHHHHHE IKVEVTGAENVPKTPCVIISNHQSTWETFFLSAYFEPMSQVLKRELLYVPFFGWAMAMLR EEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH PIAIDRENPKAALREIAKKGDELLKDGVWVLIFPEGTRVPYGQVGKFSRGGTALAVNADL HHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCC PVLPVAHNAGKYWPRDGWAKKPGTIQVVIGEPMYAEGTGPRAIAALNERVQAWNEDTQRA CEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHCCHHHHHH MGSPVEPAATPEKVPA CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]