| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is feaR [C]
Identifier: 66043279
GI number: 66043279
Start: 9410
End: 10384
Strand: Direct
Name: feaR [C]
Synonym: Psyr_0008
Alternate gene names: 66043279
Gene position: 9410-10384 (Clockwise)
Preceding gene: 66043275
Following gene: 66043284
Centisome position: 0.15
GC content: 56.0
Gene sequence:
>975_bases ATGAGCATCTATTTCGATACCAACAGCATTGTCGTGCGGGAACGGGCAGAGTTCTGGCAGGAAGTGGTGTGCAGTACTTT CGTGCCATTGGAATGTGCCTTCCCGGATCGACAAAACTTCCAGGGTCGTTTGCGCTCGCATAGCGTCGCAGGGCTTGGCT TGGTTGAAGTACAGGCCTGCGAGCAGACGGTCGTTCGAGATACCTCGAGTATTTCGCGCAGTGACGACGAGTTCGTATTG GTGAGTCTGGCGCTTGAAGGCCGGGCGCAGGTTTCTCAAGAGGGACGCGAAGCGATATTGGAGGTCGGCGACTTTGCTAT CTACGACACTCGTCGCCCTTACCGACTGCACTTCGACAGTGCGTTCAGTCAGACCGTGGTGCAAATCCCGCGCAACAGTC TGCAGCAGCGCCTGTGCAATCTGGAGTATCTGACCGCTTTATCCATGTCTCGCGATAACCCGCTCAATGGACTGGTCTTC GACTTTTTTACCGGTCTCGCTGCACTCGAGAACCGGGTAGGCGAATCGCAGCAGGCGCGGATAACCGAGCAAGGGCTGGA CTTGTTGGCAATGGCTTTGTCCGAAAGAGTCAAAGGGCAGGCACAAGGTTCGAGACGCAGTGGCTTACTGCTGCGCATTA AGGACCATATTCAGGCCAACCTGGCAGATACAAAACTGTCTCTGGCCAGTGTCAGCGTCCGATTCGGAGTCAGCACGCGC TATGTCAGCAGCCTGTTTCAGGATGAACAGACCTCGTTCGGGCGCTACCTGTTGGGCTCCCGGCTACAACGCTGCGCCAG TGATCTGCGCGAGCCATTACTCGCCAATCGACAGATCAGCGAGATCGCCTGGCGTTGGGGATTCAGTGATGTCGCTTACT TCAGCAGAGTCTTCCGCCAGCGCTTCGGAGTGCCTGCAAGGGAATATCGGCTTGAAACTTCGCCAACCCCCGGGCATAAA AAACCGACCTCTTAA
Upstream 100 bases:
>100_bases GAAAAGGAACGGCTTTTTGACTGGAAGGGATAGGCTGACAGGGATGGTTTCAGACTTGCATGGCGATTGGCTCGACGCAT CGAAGTGCAGGTTGAACGCG
Downstream 100 bases:
>100_bases AGGTCGGTTTCTGATACATCATCAAAACTTATGCACGTTTTTCCGGTTTTTATAGCCTGAAAAAATATGTATACGAATTA ACAGGTTAGACAGTCTTTTT
Product: helix-turn-helix, AraC type
Products: NA
Alternate protein names: orf2 [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSIYFDTNSIVVRERAEFWQEVVCSTFVPLECAFPDRQNFQGRLRSHSVAGLGLVEVQACEQTVVRDTSSISRSDDEFVL VSLALEGRAQVSQEGREAILEVGDFAIYDTRRPYRLHFDSAFSQTVVQIPRNSLQQRLCNLEYLTALSMSRDNPLNGLVF DFFTGLAALENRVGESQQARITEQGLDLLAMALSERVKGQAQGSRRSGLLLRIKDHIQANLADTKLSLASVSVRFGVSTR YVSSLFQDEQTSFGRYLLGSRLQRCASDLREPLLANRQISEIAWRWGFSDVAYFSRVFRQRFGVPAREYRLETSPTPGHK KPTS
Sequences:
>Translated_324_residues MSIYFDTNSIVVRERAEFWQEVVCSTFVPLECAFPDRQNFQGRLRSHSVAGLGLVEVQACEQTVVRDTSSISRSDDEFVL VSLALEGRAQVSQEGREAILEVGDFAIYDTRRPYRLHFDSAFSQTVVQIPRNSLQQRLCNLEYLTALSMSRDNPLNGLVF DFFTGLAALENRVGESQQARITEQGLDLLAMALSERVKGQAQGSRRSGLLLRIKDHIQANLADTKLSLASVSVRFGVSTR YVSSLFQDEQTSFGRYLLGSRLQRCASDLREPLLANRQISEIAWRWGFSDVAYFSRVFRQRFGVPAREYRLETSPTPGHK KPTS >Mature_323_residues SIYFDTNSIVVRERAEFWQEVVCSTFVPLECAFPDRQNFQGRLRSHSVAGLGLVEVQACEQTVVRDTSSISRSDDEFVLV SLALEGRAQVSQEGREAILEVGDFAIYDTRRPYRLHFDSAFSQTVVQIPRNSLQQRLCNLEYLTALSMSRDNPLNGLVFD FFTGLAALENRVGESQQARITEQGLDLLAMALSERVKGQAQGSRRSGLLLRIKDHIQANLADTKLSLASVSVRFGVSTRY VSSLFQDEQTSFGRYLLGSRLQRCASDLREPLLANRQISEIAWRWGFSDVAYFSRVFRQRFGVPAREYRLETSPTPGHKK PTS
Specific function: Positive Regulator Of Tyna/Maoa And Feab/Pada, The Genes For 2-Phenylethylamine Catabolism. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787649, Length=274, Percent_Identity=25.9124087591241, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003313 [H]
Pfam domain/function: PF02311 AraC_binding [H]
EC number: NA
Molecular weight: Translated: 36621; Mature: 36490
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIYFDTNSIVVRERAEFWQEVVCSTFVPLECAFPDRQNFQGRLRSHSVAGLGLVEVQAC CEEEEECCCEEEHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCHHHHHHH EQTVVRDTSSISRSDDEFVLVSLALEGRAQVSQEGREAILEVGDFAIYDTRRPYRLHFDS HHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCH AFSQTVVQIPRNSLQQRLCNLEYLTALSMSRDNPLNGLVFDFFTGLAALENRVGESQQAR HHHHHHHHCCHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH ITEQGLDLLAMALSERVKGQAQGSRRSGLLLRIKDHIQANLADTKLSLASVSVRFGVSTR HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHEEEEECCHHH YVSSLFQDEQTSFGRYLLGSRLQRCASDLREPLLANRQISEIAWRWGFSDVAYFSRVFRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH RFGVPAREYRLETSPTPGHKKPTS HHCCCHHHEEECCCCCCCCCCCCC >Mature Secondary Structure SIYFDTNSIVVRERAEFWQEVVCSTFVPLECAFPDRQNFQGRLRSHSVAGLGLVEVQAC EEEEECCCEEEHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCCCCCHHHHHHH EQTVVRDTSSISRSDDEFVLVSLALEGRAQVSQEGREAILEVGDFAIYDTRRPYRLHFDS HHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCH AFSQTVVQIPRNSLQQRLCNLEYLTALSMSRDNPLNGLVFDFFTGLAALENRVGESQQAR HHHHHHHHCCHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH ITEQGLDLLAMALSERVKGQAQGSRRSGLLLRIKDHIQANLADTKLSLASVSVRFGVSTR HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHEEEEECCHHH YVSSLFQDEQTSFGRYLLGSRLQRCASDLREPLLANRQISEIAWRWGFSDVAYFSRVFRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHH RFGVPAREYRLETSPTPGHKKPTS HHCCCHHHEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10651646 [H]