| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is tag [H]
Identifier: 66043284
GI number: 66043284
Start: 14995
End: 15546
Strand: Direct
Name: tag [H]
Synonym: Psyr_0013
Alternate gene names: 66043284
Gene position: 14995-15546 (Clockwise)
Preceding gene: 66043279
Following gene: 66043285
Centisome position: 0.25
GC content: 60.14
Gene sequence:
>552_bases ATGACACGCTGCTTTTGGTGCAACGAAGACCCCCTGTACATCGCATATCACGATCAGGAGTGGGGAGTGCCGCTGCGCGA TGCGCAGAAGCTCTTCGAGTTGCTTTTGCTCGAAGGGTTCCAGGCCGGGCTGTCGTGGATCACGATTCTCAAGCGGCGCG CGCGTTATCGCGAAGTACTGCACGGCTTTGACGTCGAGCGCCTGGCGCAGCTGAGCGATGCCGAAATAGAGGCGCTGATG CTTGATCCGAGCATCATCCGCAACCGCCTCAAGCTCAAGGCGGTGCGCACCAATGCGCGGGCCTGGCTGGCACTGGAAGA CCCGGTCGCGCTGCTCTGGTCGTTTGTCGGCGGTACTCCGAAGATCAATCACTTCAAGGATCGCAGCGAAGTCCCGGCGA TGACCGCCGAGGCCGAAGCGATGAGCAAGGCATTGAAAAAGGCCGGTTTCACCTTTGTCGGGCCGACCATCTGTTACGCC TACATGCAGGCCAGCGGCATGGTCATGGACCACACTGTCGATTGCGATCGGTATGCGATCCTGAGCCGCTGA
Upstream 100 bases:
>100_bases GCTGGCGTAGGCTGGCTCACAAATTTCACCTGTGCTGGGCTGCGATTCAAAGAGCGGGAGTATACCCGATTCGGCCGCAC GTCCACTCCTTGGGAGCCCT
Downstream 100 bases:
>100_bases CGGTTACACTACCCGCCTCGAGAATCTGGGAGTCATCTGTGGATAAGTTCAAAGGCGCCGTAATGGTCGGGGCGTTGCGA TTGTTTGCGCTGTTGCCATG
Product: DNA-3-methyladenine glycosylase I
Products: NA
Alternate protein names: 3-methyladenine-DNA glycosylase I, constitutive; TAG I; DNA-3-methyladenine glycosidase I; DNA-3-methyladenine glycosylase I [H]
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTRCFWCNEDPLYIAYHDQEWGVPLRDAQKLFELLLLEGFQAGLSWITILKRRARYREVLHGFDVERLAQLSDAEIEALM LDPSIIRNRLKLKAVRTNARAWLALEDPVALLWSFVGGTPKINHFKDRSEVPAMTAEAEAMSKALKKAGFTFVGPTICYA YMQASGMVMDHTVDCDRYAILSR
Sequences:
>Translated_183_residues MTRCFWCNEDPLYIAYHDQEWGVPLRDAQKLFELLLLEGFQAGLSWITILKRRARYREVLHGFDVERLAQLSDAEIEALM LDPSIIRNRLKLKAVRTNARAWLALEDPVALLWSFVGGTPKINHFKDRSEVPAMTAEAEAMSKALKKAGFTFVGPTICYA YMQASGMVMDHTVDCDRYAILSR >Mature_182_residues TRCFWCNEDPLYIAYHDQEWGVPLRDAQKLFELLLLEGFQAGLSWITILKRRARYREVLHGFDVERLAQLSDAEIEALML DPSIIRNRLKLKAVRTNARAWLALEDPVALLWSFVGGTPKINHFKDRSEVPAMTAEAEAMSKALKKAGFTFVGPTICYAY MQASGMVMDHTVDCDRYAILSR
Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions [H]
COG id: COG2818
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789971, Length=182, Percent_Identity=52.1978021978022, Blast_Score=202, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005019 - InterPro: IPR011257 - InterPro: IPR004597 [H]
Pfam domain/function: PF03352 Adenine_glyco [H]
EC number: =3.2.2.20 [H]
Molecular weight: Translated: 20929; Mature: 20797
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRCFWCNEDPLYIAYHDQEWGVPLRDAQKLFELLLLEGFQAGLSWITILKRRARYREVL CCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGFDVERLAQLSDAEIEALMLDPSIIRNRLKLKAVRTNARAWLALEDPVALLWSFVGGTP CCCCHHHHHHCCCCCCEEEEECHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHHCCCC KINHFKDRSEVPAMTAEAEAMSKALKKAGFTFVGPTICYAYMQASGMVMDHTVDCDRYAI CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCEEEEEECCCCCCCC LSR CCC >Mature Secondary Structure TRCFWCNEDPLYIAYHDQEWGVPLRDAQKLFELLLLEGFQAGLSWITILKRRARYREVL CEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HGFDVERLAQLSDAEIEALMLDPSIIRNRLKLKAVRTNARAWLALEDPVALLWSFVGGTP CCCCHHHHHHCCCCCCEEEEECHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHHCCCC KINHFKDRSEVPAMTAEAEAMSKALKKAGFTFVGPTICYAYMQASGMVMDHTVDCDRYAI CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCEEEEEECCCCCCCC LSR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3536912; 3520491; 8041620; 9278503 [H]