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The map label for this gene is nrdR [H]

Identifier: 161486727

GI number: 161486727

Start: 5325910

End: 5326374

Strand: Reverse

Name: nrdR [H]

Synonym: Psyr_4463

Alternate gene names: 161486727

Gene position: 5326374-5325910 (Counterclockwise)

Preceding gene: 66047694

Following gene: 66047689

Centisome position: 87.41

GC content: 61.51

Gene sequence:

>465_bases
ATGCACTGTCCCTTCTGCGGTGCCAATGACACCAAAGTCATCGACTCCCGCCTCGTCGCCGAAGGCGAGCAAGTACGCCG
CCGACGCGAGTGCCTGGCCTGCGGCGAGCGCTTCACCACGTTCGAAACGGCCGAGCTGGTCTTGCCGCGTCTGATCAAGC
AGGACGGCAGCCGCCAGCCTTTCGATGAAGAAAAACTGCGCGCCGGTATGCAGCGGGCGCTCGAAAAGCGTCCGGTGAGT
GTCGAGCGCCTGGAAGCGGCCCTGGTTCACATCAAACACAAGCTGCGCGCAACCGGCGAACGCGAAGTCAAATCGCTGGT
GGTGGGTGAGCTGGTGATGACCGAGCTGCAGAAGCTCGACGAAGTGGCCTATATCCGCTTCGCTTCGGTGTACCGCCGCT
TTCAGGACCTCAACGAATTCCGTGAAGAAATCGATCGTCTGGCCCGCGAGCCGGGCAAGGAATAA

Upstream 100 bases:

>100_bases
CACCGCTTTAATGTGCGTCTATATACCGTAAACCCTCAGCCTTGTCTTGCCAGCAGGATGCGCTAACATGGCGCTCCTCA
TTCTTTTGTTGCCAGCCACC

Downstream 100 bases:

>100_bases
ATGCATTGCTGACTGAACAGGCGGCTCTCGACGTTCATTACATGGCGCGAGCACTCGAGCTGGCGCGCAAGGGGCTGTAC
TCCACGCATCCCAACCCGCG

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MHCPFCGANDTKVIDSRLVAEGEQVRRRRECLACGERFTTFETAELVLPRLIKQDGSRQPFDEEKLRAGMQRALEKRPVS
VERLEAALVHIKHKLRATGEREVKSLVVGELVMTELQKLDEVAYIRFASVYRRFQDLNEFREEIDRLAREPGKE

Sequences:

>Translated_154_residues
MHCPFCGANDTKVIDSRLVAEGEQVRRRRECLACGERFTTFETAELVLPRLIKQDGSRQPFDEEKLRAGMQRALEKRPVS
VERLEAALVHIKHKLRATGEREVKSLVVGELVMTELQKLDEVAYIRFASVYRRFQDLNEFREEIDRLAREPGKE
>Mature_154_residues
MHCPFCGANDTKVIDSRLVAEGEQVRRRRECLACGERFTTFETAELVLPRLIKQDGSRQPFDEEKLRAGMQRALEKRPVS
VERLEAALVHIKHKLRATGEREVKSLVVGELVMTELQKLDEVAYIRFASVYRRFQDLNEFREEIDRLAREPGKE

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=147, Percent_Identity=70.0680272108844, Blast_Score=214, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 17886; Mature: 17886

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCPFCGANDTKVIDSRLVAEGEQVRRRRECLACGERFTTFETAELVLPRLIKQDGSRQP
CCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FDEEKLRAGMQRALEKRPVSVERLEAALVHIKHKLRATGEREVKSLVVGELVMTELQKLD
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
EVAYIRFASVYRRFQDLNEFREEIDRLAREPGKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHCPFCGANDTKVIDSRLVAEGEQVRRRRECLACGERFTTFETAELVLPRLIKQDGSRQP
CCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FDEEKLRAGMQRALEKRPVSVERLEAALVHIKHKLRATGEREVKSLVVGELVMTELQKLD
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
EVAYIRFASVYRRFQDLNEFREEIDRLAREPGKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA