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The map label for this gene is oxaA [H]

Identifier: 62391944

GI number: 62391944

Start: 3279987

End: 3280940

Strand: Reverse

Name: oxaA [H]

Synonym: cg3429

Alternate gene names: 62391944

Gene position: 3280940-3279987 (Counterclockwise)

Preceding gene: 62391945

Following gene: 62391943

Centisome position: 99.95

GC content: 54.19

Gene sequence:

>954_bases
GTGCTCAATTTCATTTATTGGCCAATTTCGGCCATTCTGTGGTTCTGGCATAAAGCGTTCAGCTTTGTGCTGAGCCCAGA
TTCCGGAATTACCTGGGCCTTGTCGATCATGTTCTTGACCTTCACCGTGCGTATGGTTCTGGTCAAGCCGATGGTCAACA
CCATGCGTTCACAGCGCAAGATGCAAGACATGGCTCCAAAGATGCAGGCCATCCGCGAGAAGTACAAAAATGACCAGCAG
AAGATGATGGAGGAGACCCGCAAACTTCAAAAAGAAGTGGGCGTTAACCCCATCGCAGGCTGTTTGCCAATGTTGGTGCA
GATCCCAGTGTTCCTGGGTCTGTTCCACGTGCTGCGCTCCTTCAACCGCACCGGTTCTGGCGTTGGCCAGCTGGAAATGA
CCGTTGAGCAAAACGCGAACACCCCGAACTACATCTTCGGTGTCGACGAGGTTCAGTCCTTCCTGCGTGCAGACCTGTTC
GGTGCGCCACTGTCGTCCTACATCACCATGCCTGCTGACGCGTTCGACGCGTTCCTTGGCCTGGATGTCTCCCGCCTCAA
CATCGCGCTGGTTGCAGCTCCAATGATTTTGATCATTGTCGTGGCAACTCACATGAACGCGCGTCTGTCCGTCAACCGCC
AGGAAGCTCGCAAGGCAGCCGGCAAGCAGCAGGCCGCTTCCAGCGATCAGATGGCCATGCAGATGCAAATGATGAACAAG
ATGATGCTCTGGTTCATGCCAGCCACCATTTTGTTCACCGGCTTCATCTGGACCATCGGTCTTCTTGTCTACATGATGTC
CAACAACGTGTGGACCTTCTTCCAGCAGCGCTACATCTTCGCCAAGATGGACGCTGAGGAAGCAGCTGAGGAGGAGGAAA
AGCGCGCAGCAAAGCGCACTACCGCTCCAAAGCCTGGCGTGAAGCCAGAAAACCCCAAGAAGCGTAAGAAGTAA

Upstream 100 bases:

>100_bases
CCGGTGCCGAACCATGGATTTTGGTCCACCGAAACGGTGACATAGAAGTCCTGCCAACAAGTACATAGTCCCTATTAATC
CCAAGGAGTTTCGACTCACA

Downstream 100 bases:

>100_bases
AACTTCACTAAAAACCGCCAGCCCACGCACTAAGGGCTGGCGGTTTTTTGCTGCCTGCAGCGCGCCATTTTAAGCGCTTG
TCGACGCTAAAAAGCACCAT

Product: inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MLNFIYWPISAILWFWHKAFSFVLSPDSGITWALSIMFLTFTVRMVLVKPMVNTMRSQRKMQDMAPKMQAIREKYKNDQQ
KMMEETRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLRSFNRTGSGVGQLEMTVEQNANTPNYIFGVDEVQSFLRADLF
GAPLSSYITMPADAFDAFLGLDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEARKAAGKQQAASSDQMAMQMQMMNK
MMLWFMPATILFTGFIWTIGLLVYMMSNNVWTFFQQRYIFAKMDAEEAAEEEEKRAAKRTTAPKPGVKPENPKKRKK

Sequences:

>Translated_317_residues
MLNFIYWPISAILWFWHKAFSFVLSPDSGITWALSIMFLTFTVRMVLVKPMVNTMRSQRKMQDMAPKMQAIREKYKNDQQ
KMMEETRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLRSFNRTGSGVGQLEMTVEQNANTPNYIFGVDEVQSFLRADLF
GAPLSSYITMPADAFDAFLGLDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEARKAAGKQQAASSDQMAMQMQMMNK
MMLWFMPATILFTGFIWTIGLLVYMMSNNVWTFFQQRYIFAKMDAEEAAEEEEKRAAKRTTAPKPGVKPENPKKRKK
>Mature_317_residues
MLNFIYWPISAILWFWHKAFSFVLSPDSGITWALSIMFLTFTVRMVLVKPMVNTMRSQRKMQDMAPKMQAIREKYKNDQQ
KMMEETRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLRSFNRTGSGVGQLEMTVEQNANTPNYIFGVDEVQSFLRADLF
GAPLSSYITMPADAFDAFLGLDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEARKAAGKQQAASSDQMAMQMQMMNK
MMLWFMPATILFTGFIWTIGLLVYMMSNNVWTFFQQRYIFAKMDAEEAAEEEEKRAAKRTTAPKPGVKPENPKKRKK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=87, Percent_Identity=39.0804597701149, Blast_Score=78, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 36193; Mature: 36193

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFIYWPISAILWFWHKAFSFVLSPDSGITWALSIMFLTFTVRMVLVKPMVNTMRSQRK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQDMAPKMQAIREKYKNDQQKMMEETRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLRS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FNRTGSGVGQLEMTVEQNANTPNYIFGVDEVQSFLRADLFGAPLSSYITMPADAFDAFLG
HCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHC
LDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEARKAAGKQQAASSDQMAMQMQMMNK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MMLWFMPATILFTGFIWTIGLLVYMMSNNVWTFFQQRYIFAKMDAEEAAEEEEKRAAKRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
TAPKPGVKPENPKKRKK
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNFIYWPISAILWFWHKAFSFVLSPDSGITWALSIMFLTFTVRMVLVKPMVNTMRSQRK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQDMAPKMQAIREKYKNDQQKMMEETRKLQKEVGVNPIAGCLPMLVQIPVFLGLFHVLRS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FNRTGSGVGQLEMTVEQNANTPNYIFGVDEVQSFLRADLFGAPLSSYITMPADAFDAFLG
HCCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHC
LDVSRLNIALVAAPMILIIVVATHMNARLSVNRQEARKAAGKQQAASSDQMAMQMQMMNK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MMLWFMPATILFTGFIWTIGLLVYMMSNNVWTFFQQRYIFAKMDAEEAAEEEEKRAAKRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
TAPKPGVKPENPKKRKK
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969512; 11234002 [H]