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The map label for this gene is gidB [H]

Identifier: 62391943

GI number: 62391943

Start: 3279169

End: 3279798

Strand: Reverse

Name: gidB [H]

Synonym: cg3428

Alternate gene names: 62391943

Gene position: 3279798-3279169 (Counterclockwise)

Preceding gene: 62391944

Following gene: 62391942

Centisome position: 99.91

GC content: 53.65

Gene sequence:

>630_bases
ATGACCACGCCTCCAGCAGCCGCTGAAATTTTCGGGGACAACCTCGAAAAAGCCATTGCATATCATGAATCTTTGGCAAC
AGATGGATCCGTCCGCGGATTCATCGGCCCCCGTGAAGTTCCCCGCCTGTGGGATCGCCACATTCTAAACTGTGGTGTCA
TCGGCGAAGCTATGGATGAGGGCATCTCTGTTGCAGATATTGGTTCTGGTGCGGGACTGCCAGGAATTCCTCTTGCTATC
GCACGCCCAGATCTCAACATCACTCTCATTGAGCCATTGCTCAAGCGTTCGGTGTACCTCAACGAGGTAAAAGAAGCCCT
GAACTTGGACAATGTCACCGTCGTTCGTGGTCGTGCTGAGGAAAAAGTGGTGCGCAAGCAGGTCGGATTGGTCGATATTG
TCACCTCCCGAGCTGTTGCTCCACTGGGCAAGCTAGCGACCTGGTCGTTGCCGCTGGTGAAAATCGGTGGACGCATGGTG
GCCATGAAAGGCTCCAGCGTTGAGGAAGAAATTGAGCGTGACGCCAAGGAAATCCGCAAGGCTGGCGGCACTGACATTAA
GGTTTATACCGTGGGTGAGGCGCTGTTGAGCGAGCCCACAACACTTATTTCAATCCGCAGGGAAAAGTAA

Upstream 100 bases:

>100_bases
AAAAAGCACCATTCGGCAGCCAACACTCAAGCTTCTTAAGTTGAGTCGTTATAGTTGAGTGTTGTACCGCTCGATATCTT
GCCCGAAGGGGACTTTTTTC

Downstream 100 bases:

>100_bases
CCATCCACTTCGGTGGAATGGGTACAGCGTTAAGCACTAATGTGGAATCGATGACGTGTGCATGAAGAATTCGCATGCAC
AGGAAGATAGGGATGGTTGA

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MTTPPAAAEIFGDNLEKAIAYHESLATDGSVRGFIGPREVPRLWDRHILNCGVIGEAMDEGISVADIGSGAGLPGIPLAI
ARPDLNITLIEPLLKRSVYLNEVKEALNLDNVTVVRGRAEEKVVRKQVGLVDIVTSRAVAPLGKLATWSLPLVKIGGRMV
AMKGSSVEEEIERDAKEIRKAGGTDIKVYTVGEALLSEPTTLISIRREK

Sequences:

>Translated_209_residues
MTTPPAAAEIFGDNLEKAIAYHESLATDGSVRGFIGPREVPRLWDRHILNCGVIGEAMDEGISVADIGSGAGLPGIPLAI
ARPDLNITLIEPLLKRSVYLNEVKEALNLDNVTVVRGRAEEKVVRKQVGLVDIVTSRAVAPLGKLATWSLPLVKIGGRMV
AMKGSSVEEEIERDAKEIRKAGGTDIKVYTVGEALLSEPTTLISIRREK
>Mature_208_residues
TTPPAAAEIFGDNLEKAIAYHESLATDGSVRGFIGPREVPRLWDRHILNCGVIGEAMDEGISVADIGSGAGLPGIPLAIA
RPDLNITLIEPLLKRSVYLNEVKEALNLDNVTVVRGRAEEKVVRKQVGLVDIVTSRAVAPLGKLATWSLPLVKIGGRMVA
MKGSSVEEEIERDAKEIRKAGGTDIKVYTVGEALLSEPTTLISIRREK

Specific function: Specifically methylates the N7 position of guanosine in position 518 of 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

Organism=Escherichia coli, GI1790179, Length=155, Percent_Identity=35.4838709677419, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: 2.1.-.-

Molecular weight: Translated: 22471; Mature: 22340

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPPAAAEIFGDNLEKAIAYHESLATDGSVRGFIGPREVPRLWDRHILNCGVIGEAMDE
CCCCCCHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHC
GISVADIGSGAGLPGIPLAIARPDLNITLIEPLLKRSVYLNEVKEALNLDNVTVVRGRAE
CCCEEECCCCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHH
EKVVRKQVGLVDIVTSRAVAPLGKLATWSLPLVKIGGRMVAMKGSSVEEEIERDAKEIRK
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHH
AGGTDIKVYTVGEALLSEPTTLISIRREK
CCCCEEEEEEECHHHHHCCCEEEEEECCC
>Mature Secondary Structure 
TTPPAAAEIFGDNLEKAIAYHESLATDGSVRGFIGPREVPRLWDRHILNCGVIGEAMDE
CCCCCHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHC
GISVADIGSGAGLPGIPLAIARPDLNITLIEPLLKRSVYLNEVKEALNLDNVTVVRGRAE
CCCEEECCCCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHH
EKVVRKQVGLVDIVTSRAVAPLGKLATWSLPLVKIGGRMVAMKGSSVEEEIERDAKEIRK
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHH
AGGTDIKVYTVGEALLSEPTTLISIRREK
CCCCEEEEEEECHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA