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The map label for this gene is yfiY [H]

Identifier: 62391921

GI number: 62391921

Start: 3257704

End: 3258732

Strand: Reverse

Name: yfiY [H]

Synonym: cg3404

Alternate gene names: 62391921

Gene position: 3258732-3257704 (Counterclockwise)

Preceding gene: 62391924

Following gene: 62391920

Centisome position: 99.27

GC content: 58.21

Gene sequence:

>1029_bases
ATGCAATCTATTCGAACGACCTTCAGGTCGCTTTCACGCAGCGCAGTTATCGTGGGTACCGTTTTGGCTTTGGGTATCGC
AGGATGTTCCACGGCCAGTGATGAAGCCACAAGCACCAGCGACGATGTAGCTGTCGGCGGCCGCCTATTTTCTACAGCGG
ATTCCGCCACCGCCGCTCTGGGAAGCGACGCCGAACCAGGCCAATTCCCCCGCACCGTTGTGCATTCACGCGGCGAAACT
ACCCTTGAGCAGCAGCCACAACGAGTCGTGGTTCTCGACAGCGGTGAAATCGACCAGGTTTTGAGCCTCGGCGTGACTCC
CGTCGGCATCGCCAGCCCGAAAGACGCCTCCAGCCAGCCCGCTTACCTCGAAAATCAGCTGGCAGATGTACAAACTGTGG
GCACCACGAGTGAGCTCAATTTCGAAGCCATCGCCGCCCTCAAGCCTGACCTGATTCTGGGCAGCAAGCTGCGCGTCGAC
GAATCCTACGATCAGCTCTCCCAAATCGCACCAACCGTGCTGAGTATTCGCCCCGGATTCCCCTGGAAGGAAAACTTCCT
CCTCACCGCCGACGCGCTCGGTCTCGAGGGCAAAGCCGTCGAGGTTCTCAACGAGTACCAAACCCATGTCGATGCAGTCC
GCGAGACCATCGACGGCAGCCCAGAAATCTCACTCGTCCGCTTCATGCCTGGTCGCACCCGCCTGTACGGAAACCTCTCT
TTCATCGGTGCAATCCTTAAGGACCTGGGGCTTTCTCGCCCAGAGATCCAAAATATCGACGATCTTGCCGTGGAGATCTC
CCCCGAAAACATCACCGATGCCAACGGCGACTGGATTTTCTACTCCACCTACGGCAAGCCCGAGGCCACCGAGCAGGACA
ACATTTTGTCCAACGAGCTGTGGCACAACCTCCCCGCCGTCCAAGAAGGTCATGCCCTGGAGGTCAATGACGAGAGCTGG
TTCATGGGGTTGGGTCCTCTCGGCGCCAATGAAGTGCTCGACGACATCGAAAACATCCTCGGATCCTAG

Upstream 100 bases:

>100_bases
CGGCCGAGCAGTAAACTTGCAGGTCAATGCAACTTTTTAACCGTAGAAAGTTATGGCCAAAGACTGGCAATAGGTTAAGA
ACTTGCGTTAGGATAGCCTA

Downstream 100 bases:

>100_bases
CCCCTCGACCCCGCAATTGAGCTGGTCAGCGCCTTGCAGTTTGTGCCGCGCTTAATTGCTTATCGACGTCCCCATCCCCC
TCGCCAATGCTTCGGCGAGG

Product: ABC-type cobalamin/Fe3+-siderophores transport system, component

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MQSIRTTFRSLSRSAVIVGTVLALGIAGCSTASDEATSTSDDVAVGGRLFSTADSATAALGSDAEPGQFPRTVVHSRGET
TLEQQPQRVVVLDSGEIDQVLSLGVTPVGIASPKDASSQPAYLENQLADVQTVGTTSELNFEAIAALKPDLILGSKLRVD
ESYDQLSQIAPTVLSIRPGFPWKENFLLTADALGLEGKAVEVLNEYQTHVDAVRETIDGSPEISLVRFMPGRTRLYGNLS
FIGAILKDLGLSRPEIQNIDDLAVEISPENITDANGDWIFYSTYGKPEATEQDNILSNELWHNLPAVQEGHALEVNDESW
FMGLGPLGANEVLDDIENILGS

Sequences:

>Translated_342_residues
MQSIRTTFRSLSRSAVIVGTVLALGIAGCSTASDEATSTSDDVAVGGRLFSTADSATAALGSDAEPGQFPRTVVHSRGET
TLEQQPQRVVVLDSGEIDQVLSLGVTPVGIASPKDASSQPAYLENQLADVQTVGTTSELNFEAIAALKPDLILGSKLRVD
ESYDQLSQIAPTVLSIRPGFPWKENFLLTADALGLEGKAVEVLNEYQTHVDAVRETIDGSPEISLVRFMPGRTRLYGNLS
FIGAILKDLGLSRPEIQNIDDLAVEISPENITDANGDWIFYSTYGKPEATEQDNILSNELWHNLPAVQEGHALEVNDESW
FMGLGPLGANEVLDDIENILGS
>Mature_342_residues
MQSIRTTFRSLSRSAVIVGTVLALGIAGCSTASDEATSTSDDVAVGGRLFSTADSATAALGSDAEPGQFPRTVVHSRGET
TLEQQPQRVVVLDSGEIDQVLSLGVTPVGIASPKDASSQPAYLENQLADVQTVGTTSELNFEAIAALKPDLILGSKLRVD
ESYDQLSQIAPTVLSIRPGFPWKENFLLTADALGLEGKAVEVLNEYQTHVDAVRETIDGSPEISLVRFMPGRTRLYGNLS
FIGAILKDLGLSRPEIQNIDDLAVEISPENITDANGDWIFYSTYGKPEATEQDNILSNELWHNLPAVQEGHALEVNDESW
FMGLGPLGANEVLDDIENILGS

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=276, Percent_Identity=29.3478260869565, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1786807, Length=295, Percent_Identity=25.7627118644068, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36641; Mature: 36641

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSIRTTFRSLSRSAVIVGTVLALGIAGCSTASDEATSTSDDVAVGGRLFSTADSATAAL
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCEEECCCCHHHHHC
GSDAEPGQFPRTVVHSRGETTLEQQPQRVVVLDSGEIDQVLSLGVTPVGIASPKDASSQP
CCCCCCCCCCHHHHHCCCCCCHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCC
AYLENQLADVQTVGTTSELNFEAIAALKPDLILGSKLRVDESYDQLSQIAPTVLSIRPGF
HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEECCEECCCCHHHHHHHHCCCEEEECCCC
PWKENFLLTADALGLEGKAVEVLNEYQTHVDAVRETIDGSPEISLVRFMPGRTRLYGNLS
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECHH
FIGAILKDLGLSRPEIQNIDDLAVEISPENITDANGDWIFYSTYGKPEATEQDNILSNEL
HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHH
WHNLPAVQEGHALEVNDESWFMGLGPLGANEVLDDIENILGS
HHCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MQSIRTTFRSLSRSAVIVGTVLALGIAGCSTASDEATSTSDDVAVGGRLFSTADSATAAL
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCEEECCCCHHHHHC
GSDAEPGQFPRTVVHSRGETTLEQQPQRVVVLDSGEIDQVLSLGVTPVGIASPKDASSQP
CCCCCCCCCCHHHHHCCCCCCHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCC
AYLENQLADVQTVGTTSELNFEAIAALKPDLILGSKLRVDESYDQLSQIAPTVLSIRPGF
HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEECCEECCCCHHHHHHHHCCCEEEECCCC
PWKENFLLTADALGLEGKAVEVLNEYQTHVDAVRETIDGSPEISLVRFMPGRTRLYGNLS
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECHH
FIGAILKDLGLSRPEIQNIDDLAVEISPENITDANGDWIFYSTYGKPEATEQDNILSNEL
HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHH
WHNLPAVQEGHALEVNDESWFMGLGPLGANEVLDDIENILGS
HHCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]