BacMap

Definition	Corynebacterium glutamicum ATCC 13032, complete genome.
Accession	NC_006958
Length	3,282,708

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The map label for this gene is dnaJ

Identifier: 62391633

GI number: 62391633

Start: 2955798

End: 2956985

Strand: Reverse

Name: dnaJ

Synonym: cg3098

Alternate gene names: 62391633

Gene position: 2956985-2955798 (Counterclockwise)

Preceding gene: 62391634

Following gene: 62391632

Centisome position: 90.08

GC content: 54.88

Gene sequence:

>1188_bases
GTGAACAACAGCGAATGGGCAAATAAGAACTATTACGCAGACCTGGGGGTCTCCTCGTCCGCTTCAGAAGATGAGATCAA
AAAGGCTTACCGCAAGCTCGCCAGGGAAAATCACCCAGATAAAAATCCAGGTGACAAGGCCGCTGAAGATCGATTCAAAA
AAGCGGCCGAGGCATATGACGTACTTGGTGATGACAAGAAACGAAAAGAATACGACGAGCTCAAAGCACTTCTAGCTTCT
GGTGGAATCCGCGGAGGATTCGGAAGCGGAGGTGCGGGATTCCCCGGCGGGTTTCGCACGTCGACGGGAGGATTCGACAC
CTCAGACCTCTTCGGAGGAGGACAAGGTGGAGGGTTTTCTACGGACGGCGGTTTGGGCGATATCTTCGGTGGCCTTTTCA
ACCGCGGCGCTGGTTCTCACCAGTCAGCTAGGCCGACGCGGGGGGCGGATGTACAAACCGAAATAACTCTCTCGTTTGTT
GAGGCAGCGAAAGGCACGACCATCCCAGTGGAACTCACCGGCGATGCGCCCTGCAACACCTGCCACGGATCGGGCTCCAA
ATCAGGCCACCCCGCAAAATGTGGAACCTGTGATGGAACCGGATTCACCTCTGAGAACAAGGGTGCTTTCGGATTCTCCG
CTCCATGTGCAACCTGTGGTGGCACTGGTGAAATAATCACTGATCCTTGCGATAACTGCCACGGCCGAGGCACCGTCCGG
AAGTCTCGTTCCATCACCGTGCGTATCCCAACTGGTGTGGAAGATGGACAGAAAGTTCGTCTTGCAGGCCAAGGCGAAGC
AGGACCAAATGGCAAACCAGCGGGCGATCTCTTTGTGAAAGTCCACGTGAAAAAGGACGATGTGTTCACACGCGACGGCA
GCAACATTTTGATCACCATTCCCGTGAGCTTCAGCGAGCTGGCTTTGGGTGGCGCTATTTCTGTGCCAACGCTCAACAAG
CCTGTAAAACTCAAGCTACCTGCGGGAACGCCAGATGGTCGTACTTTGCGTGTACGCGGTCGCGGTATCGAAGCACGTGA
TTCCACTGGTGATCTGCTGGTTACAGTCCAGGTTTCTGTCCCGAAGAATCTGGATGACAACGCTGCGGAAGCTCTCCGCG
CATATGCTGAAGCAGAAACTAATTCAGGTTTTGATCCCCGCGCTAACTGGGCGGGCCAGAACCGCTAG

Upstream 100 bases:

>100_bases
ATCCGCCGGTGTCCGGACAACAAAACTTGCAACACAAGATAACTTAAGAAATTGCATACAATTCACCGCATATAAGACTC
ATGGAAGGAGGGGATGCCCA

Downstream 100 bases:

>100_bases
ACGTTCTCTTTGAGAAAGGAGGTGACGAAACATGGCATCCACACCGAAAAAATCCAACGATGAAGGTCAGTTTGACCGTG
TCGATTTTCAAGGGGAAGTC

Product: chaperone protein DnaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MNNSEWANKNYYADLGVSSSASEDEIKKAYRKLARENHPDKNPGDKAAEDRFKKAAEAYDVLGDDKKRKEYDELKALLAS
GGIRGGFGSGGAGFPGGFRTSTGGFDTSDLFGGGQGGGFSTDGGLGDIFGGLFNRGAGSHQSARPTRGADVQTEITLSFV
EAAKGTTIPVELTGDAPCNTCHGSGSKSGHPAKCGTCDGTGFTSENKGAFGFSAPCATCGGTGEIITDPCDNCHGRGTVR
KSRSITVRIPTGVEDGQKVRLAGQGEAGPNGKPAGDLFVKVHVKKDDVFTRDGSNILITIPVSFSELALGGAISVPTLNK
PVKLKLPAGTPDGRTLRVRGRGIEARDSTGDLLVTVQVSVPKNLDDNAAEALRAYAEAETNSGFDPRANWAGQNR

Sequences:

>Translated_395_residues
MNNSEWANKNYYADLGVSSSASEDEIKKAYRKLARENHPDKNPGDKAAEDRFKKAAEAYDVLGDDKKRKEYDELKALLAS
GGIRGGFGSGGAGFPGGFRTSTGGFDTSDLFGGGQGGGFSTDGGLGDIFGGLFNRGAGSHQSARPTRGADVQTEITLSFV
EAAKGTTIPVELTGDAPCNTCHGSGSKSGHPAKCGTCDGTGFTSENKGAFGFSAPCATCGGTGEIITDPCDNCHGRGTVR
KSRSITVRIPTGVEDGQKVRLAGQGEAGPNGKPAGDLFVKVHVKKDDVFTRDGSNILITIPVSFSELALGGAISVPTLNK
PVKLKLPAGTPDGRTLRVRGRGIEARDSTGDLLVTVQVSVPKNLDDNAAEALRAYAEAETNSGFDPRANWAGQNR
>Mature_395_residues
MNNSEWANKNYYADLGVSSSASEDEIKKAYRKLARENHPDKNPGDKAAEDRFKKAAEAYDVLGDDKKRKEYDELKALLAS
GGIRGGFGSGGAGFPGGFRTSTGGFDTSDLFGGGQGGGFSTDGGLGDIFGGLFNRGAGSHQSARPTRGADVQTEITLSFV
EAAKGTTIPVELTGDAPCNTCHGSGSKSGHPAKCGTCDGTGFTSENKGAFGFSAPCATCGGTGEIITDPCDNCHGRGTVR
KSRSITVRIPTGVEDGQKVRLAGQGEAGPNGKPAGDLFVKVHVKKDDVFTRDGSNILITIPVSFSELALGGAISVPTLNK
PVKLKLPAGTPDGRTLRVRGRGIEARDSTGDLLVTVQVSVPKNLDDNAAEALRAYAEAETNSGFDPRANWAGQNR

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain

Homologues:

Organism=Homo sapiens, GI205360838, Length=380, Percent_Identity=32.3684210526316, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI205360840, Length=380, Percent_Identity=32.3684210526316, Blast_Score=192, Evalue=3e-49,
Organism=Homo sapiens, GI194328760, Length=367, Percent_Identity=29.9727520435967, Blast_Score=145, Evalue=8e-35,
Organism=Homo sapiens, GI194328758, Length=367, Percent_Identity=29.9727520435967, Blast_Score=145, Evalue=9e-35,
Organism=Homo sapiens, GI4504511, Length=366, Percent_Identity=30.0546448087432, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI5031741, Length=376, Percent_Identity=28.7234042553192, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI6631085, Length=394, Percent_Identity=28.6802030456853, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI7706495, Length=372, Percent_Identity=27.9569892473118, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI194328762, Length=335, Percent_Identity=26.5671641791045, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI5453690, Length=390, Percent_Identity=24.8717948717949, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI201862587, Length=65, Percent_Identity=61.5384615384615, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI201862518, Length=65, Percent_Identity=61.5384615384615, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI56549115, Length=65, Percent_Identity=61.5384615384615, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI88501736, Length=110, Percent_Identity=47.2727272727273, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI27151736, Length=110, Percent_Identity=47.2727272727273, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI47777312, Length=128, Percent_Identity=45.3125, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI23503241, Length=64, Percent_Identity=62.5, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI9558755, Length=108, Percent_Identity=45.3703703703704, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=59.0909090909091, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=59.0909090909091, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI39204547, Length=373, Percent_Identity=24.1286863270777, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI56687498, Length=62, Percent_Identity=54.8387096774194, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI194306642, Length=113, Percent_Identity=43.3628318584071, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI194306640, Length=113, Percent_Identity=43.3628318584071, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI21553335, Length=78, Percent_Identity=48.7179487179487, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI68077168, Length=92, Percent_Identity=45.6521739130435, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI68077166, Length=92, Percent_Identity=45.6521739130435, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI72534740, Length=113, Percent_Identity=41.5929203539823, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI24308127, Length=66, Percent_Identity=46.969696969697, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI29126218, Length=66, Percent_Identity=50, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI22749377, Length=115, Percent_Identity=40.8695652173913, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1786197, Length=379, Percent_Identity=40.3693931398417, Blast_Score=282, Evalue=3e-77,
Organism=Escherichia coli, GI1787235, Length=384, Percent_Identity=29.9479166666667, Blast_Score=174, Evalue=9e-45,
Organism=Caenorhabditis elegans, GI17553096, Length=378, Percent_Identity=30.4232804232804, Blast_Score=158, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI17553098, Length=378, Percent_Identity=30.4232804232804, Blast_Score=158, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI17507263, Length=374, Percent_Identity=28.6096256684492, Blast_Score=118, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17534355, Length=66, Percent_Identity=60.6060606060606, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17554644, Length=126, Percent_Identity=38.8888888888889, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17563890, Length=213, Percent_Identity=29.5774647887324, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI212645553, Length=64, Percent_Identity=48.4375, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI86563276, Length=64, Percent_Identity=54.6875, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115532378, Length=101, Percent_Identity=36.6336633663366, Blast_Score=66, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323870, Length=368, Percent_Identity=31.7934782608696, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6324265, Length=366, Percent_Identity=31.1475409836066, Blast_Score=146, Evalue=7e-36,
Organism=Saccharomyces cerevisiae, GI6321094, Length=392, Percent_Identity=30.8673469387755, Blast_Score=126, Evalue=7e-30,
Organism=Saccharomyces cerevisiae, GI6323119, Length=390, Percent_Identity=27.4358974358974, Blast_Score=97, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6322194, Length=103, Percent_Identity=45.6310679611651, Blast_Score=79, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6322388, Length=112, Percent_Identity=41.9642857142857, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323813, Length=140, Percent_Identity=40.7142857142857, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6320888, Length=148, Percent_Identity=31.0810810810811, Blast_Score=63, Evalue=9e-11,
Organism=Drosophila melanogaster, GI45552813, Length=388, Percent_Identity=31.701030927835, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI45552811, Length=388, Percent_Identity=31.9587628865979, Blast_Score=175, Evalue=4e-44,
Organism=Drosophila melanogaster, GI45549272, Length=388, Percent_Identity=31.701030927835, Blast_Score=175, Evalue=4e-44,
Organism=Drosophila melanogaster, GI24646562, Length=413, Percent_Identity=29.0556900726392, Blast_Score=141, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24646560, Length=413, Percent_Identity=29.0556900726392, Blast_Score=141, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24646558, Length=413, Percent_Identity=29.0556900726392, Blast_Score=141, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24646556, Length=413, Percent_Identity=29.0556900726392, Blast_Score=141, Evalue=8e-34,
Organism=Drosophila melanogaster, GI21357547, Length=413, Percent_Identity=29.0556900726392, Blast_Score=141, Evalue=8e-34,
Organism=Drosophila melanogaster, GI28574949, Length=382, Percent_Identity=26.1780104712042, Blast_Score=133, Evalue=2e-31,
Organism=Drosophila melanogaster, GI20129487, Length=370, Percent_Identity=30, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24584014, Length=370, Percent_Identity=30, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24654066, Length=113, Percent_Identity=44.2477876106195, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24654070, Length=113, Percent_Identity=44.2477876106195, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24654068, Length=113, Percent_Identity=44.2477876106195, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24654072, Length=113, Percent_Identity=44.2477876106195, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI85726398, Length=79, Percent_Identity=55.6962025316456, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24658562, Length=250, Percent_Identity=32.8, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24658555, Length=250, Percent_Identity=32.8, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=54.6875, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI19920464, Length=238, Percent_Identity=26.0504201680672, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17737735, Length=66, Percent_Identity=46.969696969697, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI28574723, Length=66, Percent_Identity=46.969696969697, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24668523, Length=66, Percent_Identity=46.969696969697, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DNAJ2_CORGL (Q8NLY8)

Other databases:

- EMBL:   BA000036
- EMBL:   BX927156
- RefSeq:   NP_601990.1
- RefSeq:   YP_227035.1
- ProteinModelPortal:   Q8NLY8
- GeneID:   1020741
- GeneID:   3345201
- GenomeReviews:   BA000036_GR
- GenomeReviews:   BX927147_GR
- KEGG:   cgb:cg3098
- KEGG:   cgl:NCgl2700
- HOGENOM:   HBG635315
- OMA:   TGFTSEN
- PhylomeDB:   Q8NLY8
- ProtClustDB:   PRK14279
- BioCyc:   CGLU196627:CG3098-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01152
- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305
- Gene3D:   G3DSA:1.10.287.110
- Gene3D:   G3DSA:2.10.230.10
- PANTHER:   PTHR11821
- PRINTS:   PR00625
- SMART:   SM00271
- TIGRFAMs:   TIGR02349

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG; SSF46565 DnaJ_N; SSF49493 HSP40_DnaJ_pep; SSF57938 HSP_DnaJ_cys-rich

EC number: NA

Molecular weight: Translated: 41037; Mature: 41037

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS00636 DNAJ_1; PS50076 DNAJ_2; PS51188 ZF_CR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSEWANKNYYADLGVSSSASEDEIKKAYRKLARENHPDKNPGDKAAEDRFKKAAEAYD
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
VLGDDKKRKEYDELKALLASGGIRGGFGSGGAGFPGGFRTSTGGFDTSDLFGGGQGGGFS
HHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
TDGGLGDIFGGLFNRGAGSHQSARPTRGADVQTEITLSFVEAAKGTTIPVELTGDAPCNT
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCEEEEEECCCCCCCC
CHGSGSKSGHPAKCGTCDGTGFTSENKGAFGFSAPCATCGGTGEIITDPCDNCHGRGTVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEE
KSRSITVRIPTGVEDGQKVRLAGQGEAGPNGKPAGDLFVKVHVKKDDVFTRDGSNILITI
CCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCEEEECCCEEEEEE
PVSFSELALGGAISVPTLNKPVKLKLPAGTPDGRTLRVRGRGIEARDSTGDLLVTVQVSV
CCCHHHHHCCCEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEC
PKNLDDNAAEALRAYAEAETNSGFDPRANWAGQNR
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNNSEWANKNYYADLGVSSSASEDEIKKAYRKLARENHPDKNPGDKAAEDRFKKAAEAYD
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
VLGDDKKRKEYDELKALLASGGIRGGFGSGGAGFPGGFRTSTGGFDTSDLFGGGQGGGFS
HHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
TDGGLGDIFGGLFNRGAGSHQSARPTRGADVQTEITLSFVEAAKGTTIPVELTGDAPCNT
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCEEEEEECCCCCCCC
CHGSGSKSGHPAKCGTCDGTGFTSENKGAFGFSAPCATCGGTGEIITDPCDNCHGRGTVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEE
KSRSITVRIPTGVEDGQKVRLAGQGEAGPNGKPAGDLFVKVHVKKDDVFTRDGSNILITI
CCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCEEEECCCEEEEEE
PVSFSELALGGAISVPTLNKPVKLKLPAGTPDGRTLRVRGRGIEARDSTGDLLVTVQVSV
CCCHHHHHCCCEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEC
PKNLDDNAAEALRAYAEAETNSGFDPRANWAGQNR
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626