| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is kdgR [C]
Identifier: 62391478
GI number: 62391478
Start: 2779905
End: 2780561
Strand: Reverse
Name: kdgR [C]
Synonym: cg2922
Alternate gene names: 62391478
Gene position: 2780561-2779905 (Counterclockwise)
Preceding gene: 62391479
Following gene: 62391477
Centisome position: 84.7
GC content: 52.82
Gene sequence:
>657_bases TTGCCTAGCTCGACGGCGCACCGTTTGGTCGTGGAATTGACGTCGGTGAAGTTGCTGGAGCGCTTTTCTGACGGCAAATA TGGCATCGGCACGCATGCGTGGGAGACGTTTGTGAGGGCGAATCCTTTGGAGCGCATGAGGCTGCAAGCTCAGACCATCT TGAGTGATGTGCGTGAAGAGCTGGGGCAATACGTGTGTTTGGCGGTGCCGGATTTTGTGGATCGTACGATTTTGTATGTG GAGCGTTTCGATTCGACGGATAGTCAGCTGCGTCTTTTGGGCAGGCATGCGGGGCGTTTGGATTTGCACACCACATCATT GGGGTTGGTGATGTTGGCGTTTGCTTCGCCGCAAACCATTAAGGCAGTGACGAGTTCGCCGTTTAAGGATTCCATTTCGG GGGATATTACGGATGGTGCTGCTGTAGCTGCGATGCTCCCGGAAATTCGCGCGACGGGGCATTTTGTATTTGTGGGTGGT CTGATTCCGGAGAATACGGCGGTTGCGGCTCCGGTTTTTGATCGAAAAGGGGTTGTTCGGGCATCAGTGGGGGTAGTGGC GAGGAACGATGAAATTGATGTGAATCAGGCGGTTTCTGTGGTGCTTGATGCATGCCAAAAGCTCAGCGTAAGGCTACAAA AAGACTCTCTATATTAA
Upstream 100 bases:
>100_bases CATCGGGGGAAACGGTGTTGCAACGCACCATGCGGGTGTTGCACTGCTTTGATGCAGAAAACGCGAGGTTGGGGCCTCGG AAATCGCGCGTCGCAGTGGT
Downstream 100 bases:
>100_bases GTTCGCATTTCGAACGCGCCCATTTGGCGTGAATGCCCCTACACCCACCTCTTCCCATTGAATGGGAAGAACTTGGTTGT GTGTTTGTGACACCTATTCT
Product: IclR family regulatory protein
Products: NA
Alternate protein names: Transcriptional Regulator; Regulatory Protein; Iclr Family Transcriptional Regulator; Transcription Regulator
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MPSSTAHRLVVELTSVKLLERFSDGKYGIGTHAWETFVRANPLERMRLQAQTILSDVREELGQYVCLAVPDFVDRTILYV ERFDSTDSQLRLLGRHAGRLDLHTTSLGLVMLAFASPQTIKAVTSSPFKDSISGDITDGAAVAAMLPEIRATGHFVFVGG LIPENTAVAAPVFDRKGVVRASVGVVARNDEIDVNQAVSVVLDACQKLSVRLQKDSLY
Sequences:
>Translated_218_residues MPSSTAHRLVVELTSVKLLERFSDGKYGIGTHAWETFVRANPLERMRLQAQTILSDVREELGQYVCLAVPDFVDRTILYV ERFDSTDSQLRLLGRHAGRLDLHTTSLGLVMLAFASPQTIKAVTSSPFKDSISGDITDGAAVAAMLPEIRATGHFVFVGG LIPENTAVAAPVFDRKGVVRASVGVVARNDEIDVNQAVSVVLDACQKLSVRLQKDSLY >Mature_217_residues PSSTAHRLVVELTSVKLLERFSDGKYGIGTHAWETFVRANPLERMRLQAQTILSDVREELGQYVCLAVPDFVDRTILYVE RFDSTDSQLRLLGRHAGRLDLHTTSLGLVMLAFASPQTIKAVTSSPFKDSISGDITDGAAVAAMLPEIRATGHFVFVGGL IPENTAVAAPVFDRKGVVRASVGVVARNDEIDVNQAVSVVLDACQKLSVRLQKDSLY
Specific function: Transcriptional Regulator Of The Kdgk Gene For The Kdg Kinase And The Kdgt Gene For The Kdg Permease. [C]
COG id: COG1414
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23770; Mature: 23638
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS51078 ICLR_ED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSTAHRLVVELTSVKLLERFSDGKYGIGTHAWETFVRANPLERMRLQAQTILSDVREE CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LGQYVCLAVPDFVDRTILYVERFDSTDSQLRLLGRHAGRLDLHTTSLGLVMLAFASPQTI HHHEEEEECCHHHHHHEEEEECCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCHH KAVTSSPFKDSISGDITDGAAVAAMLPEIRATGHFVFVGGLIPENTAVAAPVFDRKGVVR HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCCCCCEE ASVGVVARNDEIDVNQAVSVVLDACQKLSVRLQKDSLY EEEEEEEECCCCCHHHHHHHHHHHHHHHHEEHHCCCCC >Mature Secondary Structure PSSTAHRLVVELTSVKLLERFSDGKYGIGTHAWETFVRANPLERMRLQAQTILSDVREE CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LGQYVCLAVPDFVDRTILYVERFDSTDSQLRLLGRHAGRLDLHTTSLGLVMLAFASPQTI HHHEEEEECCHHHHHHEEEEECCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCHH KAVTSSPFKDSISGDITDGAAVAAMLPEIRATGHFVFVGGLIPENTAVAAPVFDRKGVVR HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCCCCCEE ASVGVVARNDEIDVNQAVSVVLDACQKLSVRLQKDSLY EEEEEEEECCCCCHHHHHHHHHHHHHHHHEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA