| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is yhjE [H]
Identifier: 62391477
GI number: 62391477
Start: 2779322
End: 2779750
Strand: Reverse
Name: yhjE [H]
Synonym: cg2921
Alternate gene names: 62391477
Gene position: 2779750-2779322 (Counterclockwise)
Preceding gene: 62391478
Following gene: 62391476
Centisome position: 84.68
GC content: 56.88
Gene sequence:
>429_bases ATGGAAACCGTGAGGACCGCAACCGCCGCTCCTGAAACTGCATCTTTGAAGCTGCGTGAGGCAGAAAGCCCAGCAAAGTC CCCAAAGAAAGCCGCCTTGGCGTCACTTTTGGGTTCGACTCTGGAGTACTACGACTTTGTCATTTACGGCACCGCCTCCG CGCTGCTGTTCAATCACCTCTTCTTCCCACAGGGCGACCCAGTCGTCGCGACGATCGGCTCTCTCGCCTCATTCGGTGTT GCGTACATTGCGCGCCCCATCGGTGGTCTGGTGATGGGACATGTTGGCGATAAGATCAGTCGCAAAACCGCCCTCATGGT GACGTTGATGATCATGGGTATCGCCTCCATTTCCATCGGACTTCTGCCCACCTACGGACAGATCGGCATTTGGGCGACCG TGCTGTTGATGATCGCCCGCATCGCATAG
Upstream 100 bases:
>100_bases CCATTGAATGGGAAGAACTTGGTTGTGTGTTTGTGACACCTATTCTAAAGAACATTAAACGTGATTAAGTTCATGATTCT TAATGAGAAAGGGTGATCAC
Downstream 100 bases:
>100_bases GGATTCTCTGCAGTCGCAGAAGCTGCAGGTGCATCCACACTGACCATGGAACATTCTCCTGAAGGCAAGCGTGGATTCTT CACCTCATCGGTGATGGCGG
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues METVRTATAAPETASLKLREAESPAKSPKKAALASLLGSTLEYYDFVIYGTASALLFNHLFFPQGDPVVATIGSLASFGV AYIARPIGGLVMGHVGDKISRKTALMVTLMIMGIASISIGLLPTYGQIGIWATVLLMIARIA
Sequences:
>Translated_142_residues METVRTATAAPETASLKLREAESPAKSPKKAALASLLGSTLEYYDFVIYGTASALLFNHLFFPQGDPVVATIGSLASFGV AYIARPIGGLVMGHVGDKISRKTALMVTLMIMGIASISIGLLPTYGQIGIWATVLLMIARIA >Mature_142_residues METVRTATAAPETASLKLREAESPAKSPKKAALASLLGSTLEYYDFVIYGTASALLFNHLFFPQGDPVVATIGSLASFGV AYIARPIGGLVMGHVGDKISRKTALMVTLMIMGIASISIGLLPTYGQIGIWATVLLMIARIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789941, Length=127, Percent_Identity=48.8188976377953, Blast_Score=138, Evalue=2e-34, Organism=Escherichia coli, GI1788292, Length=130, Percent_Identity=43.0769230769231, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI1790550, Length=114, Percent_Identity=43.859649122807, Blast_Score=106, Evalue=5e-25, Organism=Escherichia coli, GI1788942, Length=94, Percent_Identity=35.1063829787234, Blast_Score=77, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 14929; Mature: 14929
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METVRTATAAPETASLKLREAESPAKSPKKAALASLLGSTLEYYDFVIYGTASALLFNHL CCCCCCCCCCCCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFPQGDPVVATIGSLASFGVAYIARPIGGLVMGHVGDKISRKTALMVTLMIMGIASISIG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC LLPTYGQIGIWATVLLMIARIA CCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure METVRTATAAPETASLKLREAESPAKSPKKAALASLLGSTLEYYDFVIYGTASALLFNHL CCCCCCCCCCCCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFPQGDPVVATIGSLASFGVAYIARPIGGLVMGHVGDKISRKTALMVTLMIMGIASISIG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC LLPTYGQIGIWATVLLMIARIA CCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]