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The map label for this gene is yclF [H]

Identifier: 62391442

GI number: 62391442

Start: 2742462

End: 2743907

Strand: Reverse

Name: yclF [H]

Synonym: cg2884

Alternate gene names: 62391442

Gene position: 2743907-2742462 (Counterclockwise)

Preceding gene: 62391445

Following gene: 62391441

Centisome position: 83.59

GC content: 52.56

Gene sequence:

>1446_bases
ATGGTCCAACTGGATCAACGGGTTAGGTTCAAAAGCGCAACCTCAATAATCAGTATTGAAATGTGGGAGCGATTCAGCTT
CTACGGCATGCAAGCACTCTTGGTGTACTACCTGTATTTTGATGTTGCAGCCGGTGGATTAGGCCTTGATCAAACCCAAG
CAACAGGACTGGTCGGCGTTTATGGCGCACTGCTCTACCTCTGCTGTTGGGCAGGCGGTTGGGTCAGTGACAGAGTCCTG
GGCGCAGAAAAAACCCTGCTGGGCGGTGCGATCTCAGTAACCATCGGACACCTTGTGCTTGCTGGCCTCGGCGGGAAAAT
TGGTCTAGCCATTGGCCTTGGATGCATCGCGATCGGTTCAGGATTTGTGAAAACAGCAGCCATCACCGTGCTGGGATCCA
GGCATGGTGAACAAGAAGGAGACGCAAAGGCAGATCCCGCATTCCAACTCTTCTACCTAGGCATCAACGTTGGTGCACTG
CTCGGACCACTCCTGACCGGTTGGCTCTCCAGCAGGTATTCCTTTGAAATGGGATTCGGCGCAGCCGCAGTCCTTATGAT
CGGCGGATTGGGAATCTACGCAGCGTTGCGGAAACCAATGCTGCAATCGTTCCCGCTCGAGGTGAAGAAAGCGCTGCTCC
GCGCCCAAAACCCTGCAGAAAAACATGTGATTAGCACGGCATTTGCTGCAGTGGCTGTGCTTTGCGGAGTGCTGCTTTAT
CTTCTCCTTACAGAAACAGTCAGCGCAGACCAACTAGCTGGAGCTCTGCTTTTAGTAACAATCGGTGCAGCACTATGGCT
CATTATCCAGCCCTTACGACACCCACAAGTCAGCTCCGAAGAGAAACGAAAAGTGCTGGCATTCATCCCGATCTTCGTCT
GCTCAACCGCATTCTGGGCAGTGCAAGCACAAACCTACGGCGTACTAGCTGTGTACTCCCAAGAACGTGTTGACCGCATG
GTTGGCGATTTTGAGATCCCAGCAGCCTGGTCACAATCACTCAATCCTTTTTTCATCCTGGCGCTGTCCATCCCGATTTC
CCTGTGGTTTATGCGCGGATCACGCGCCCCAAGAGTGAAAATTGGAATCAGCATTGGAGTGATCATTGCGGGAAGTGGGC
TTCTAGTTCTTATTCCATTTGTTGGAATGCCGCTCGCGCCAGTGTGGGTGCTGCCTTTAAGTGTTTTCCTCATCTCACTG
GGAGAACTTTTCATCGGACCCGGAGGAATGGCTGCGACTGCGCACCACGCACCACGAATATTTGCCACACGATTCTCCGC
CCTGTATTTCCTCACACTCGCCATCGGCATGTCTATTGCAGGTAATGTGTCCAAATTTTACGACCCCACCAACCACACCT
CCGAGCTCCGATACTTCGCGGTATTTGGCATTTCGATCATCGTCATCGGTGTCGGTTCACTGATGGTGGCCAAGAAGGTT
GGATAA

Upstream 100 bases:

>100_bases
GGTTTGGATGTATATCTGCAGTGTAATAGGTTAATTGAACAGTGTTCAATTTTTGGCGCTAAGTGTTTTTAATTACCGCA
GCTTTGTCTTAGGAGAAGTC

Downstream 100 bases:

>100_bases
CAGGGTTAATCTTGGGTGATATTGAAATGACGTATTCCTGATTGGGCTGAAAAATCTGTGACATCACCTGAATTACAAAA
CATCCTTAACAATTATTGGA

Product: dipeptide/tripeptide permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MVQLDQRVRFKSATSIISIEMWERFSFYGMQALLVYYLYFDVAAGGLGLDQTQATGLVGVYGALLYLCCWAGGWVSDRVL
GAEKTLLGGAISVTIGHLVLAGLGGKIGLAIGLGCIAIGSGFVKTAAITVLGSRHGEQEGDAKADPAFQLFYLGINVGAL
LGPLLTGWLSSRYSFEMGFGAAAVLMIGGLGIYAALRKPMLQSFPLEVKKALLRAQNPAEKHVISTAFAAVAVLCGVLLY
LLLTETVSADQLAGALLLVTIGAALWLIIQPLRHPQVSSEEKRKVLAFIPIFVCSTAFWAVQAQTYGVLAVYSQERVDRM
VGDFEIPAAWSQSLNPFFILALSIPISLWFMRGSRAPRVKIGISIGVIIAGSGLLVLIPFVGMPLAPVWVLPLSVFLISL
GELFIGPGGMAATAHHAPRIFATRFSALYFLTLAIGMSIAGNVSKFYDPTNHTSELRYFAVFGISIIVIGVGSLMVAKKV
G

Sequences:

>Translated_481_residues
MVQLDQRVRFKSATSIISIEMWERFSFYGMQALLVYYLYFDVAAGGLGLDQTQATGLVGVYGALLYLCCWAGGWVSDRVL
GAEKTLLGGAISVTIGHLVLAGLGGKIGLAIGLGCIAIGSGFVKTAAITVLGSRHGEQEGDAKADPAFQLFYLGINVGAL
LGPLLTGWLSSRYSFEMGFGAAAVLMIGGLGIYAALRKPMLQSFPLEVKKALLRAQNPAEKHVISTAFAAVAVLCGVLLY
LLLTETVSADQLAGALLLVTIGAALWLIIQPLRHPQVSSEEKRKVLAFIPIFVCSTAFWAVQAQTYGVLAVYSQERVDRM
VGDFEIPAAWSQSLNPFFILALSIPISLWFMRGSRAPRVKIGISIGVIIAGSGLLVLIPFVGMPLAPVWVLPLSVFLISL
GELFIGPGGMAATAHHAPRIFATRFSALYFLTLAIGMSIAGNVSKFYDPTNHTSELRYFAVFGISIIVIGVGSLMVAKKV
G
>Mature_481_residues
MVQLDQRVRFKSATSIISIEMWERFSFYGMQALLVYYLYFDVAAGGLGLDQTQATGLVGVYGALLYLCCWAGGWVSDRVL
GAEKTLLGGAISVTIGHLVLAGLGGKIGLAIGLGCIAIGSGFVKTAAITVLGSRHGEQEGDAKADPAFQLFYLGINVGAL
LGPLLTGWLSSRYSFEMGFGAAAVLMIGGLGIYAALRKPMLQSFPLEVKKALLRAQNPAEKHVISTAFAAVAVLCGVLLY
LLLTETVSADQLAGALLLVTIGAALWLIIQPLRHPQVSSEEKRKVLAFIPIFVCSTAFWAVQAQTYGVLAVYSQERVDRM
VGDFEIPAAWSQSLNPFFILALSIPISLWFMRGSRAPRVKIGISIGVIIAGSGLLVLIPFVGMPLAPVWVLPLSVFLISL
GELFIGPGGMAATAHHAPRIFATRFSALYFLTLAIGMSIAGNVSKFYDPTNHTSELRYFAVFGISIIVIGVGSLMVAKKV
G

Specific function: Unknown

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family [H]

Homologues:

Organism=Homo sapiens, GI226371746, Length=195, Percent_Identity=29.7435897435897, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI4827008, Length=215, Percent_Identity=29.3023255813954, Blast_Score=73, Evalue=7e-13,
Organism=Escherichia coli, GI1786927, Length=413, Percent_Identity=29.7820823244552, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1790572, Length=369, Percent_Identity=28.1842818428184, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1787922, Length=494, Percent_Identity=25.3036437246964, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1789911, Length=478, Percent_Identity=25.7322175732218, Blast_Score=113, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI71987453, Length=346, Percent_Identity=25.7225433526012, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24639585, Length=223, Percent_Identity=31.8385650224215, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24639583, Length=223, Percent_Identity=31.8385650224215, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28571098, Length=344, Percent_Identity=25.8720930232558, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24639581, Length=223, Percent_Identity=31.8385650224215, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI28571102, Length=344, Percent_Identity=25.8720930232558, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28571100, Length=344, Percent_Identity=25.8720930232558, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 51241; Mature: 51241

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQLDQRVRFKSATSIISIEMWERFSFYGMQALLVYYLYFDVAAGGLGLDQTQATGLVGV
CCCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCHHHHH
YGALLYLCCWAGGWVSDRVLGAEKTLLGGAISVTIGHLVLAGLGGKIGLAIGLGCIAIGS
HHHHHHHHHHCCCCHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
GFVKTAAITVLGSRHGEQEGDAKADPAFQLFYLGINVGALLGPLLTGWLSSRYSFEMGFG
CHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCEEEECCCC
AAAVLMIGGLGIYAALRKPMLQSFPLEVKKALLRAQNPAEKHVISTAFAAVAVLCGVLLY
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LLLTETVSADQLAGALLLVTIGAALWLIIQPLRHPQVSSEEKRKVLAFIPIFVCSTAFWA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHE
VQAQTYGVLAVYSQERVDRMVGDFEIPAAWSQSLNPFFILALSIPISLWFMRGSRAPRVK
EEECCCCEEEEECHHHHHHHHCCCCCCCHHHCCCCCEEEEEEHHHHHEEEEECCCCCEEE
IGISIGVIIAGSGLLVLIPFVGMPLAPVWVLPLSVFLISLGELFIGPGGMAATAHHAPRI
EEEEEEEEEECCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
FATRFSALYFLTLAIGMSIAGNVSKFYDPTNHTSELRYFAVFGISIIVIGVGSLMVAKKV
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
G
C
>Mature Secondary Structure
MVQLDQRVRFKSATSIISIEMWERFSFYGMQALLVYYLYFDVAAGGLGLDQTQATGLVGV
CCCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCHHHHH
YGALLYLCCWAGGWVSDRVLGAEKTLLGGAISVTIGHLVLAGLGGKIGLAIGLGCIAIGS
HHHHHHHHHHCCCCHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
GFVKTAAITVLGSRHGEQEGDAKADPAFQLFYLGINVGALLGPLLTGWLSSRYSFEMGFG
CHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCEEEECCCC
AAAVLMIGGLGIYAALRKPMLQSFPLEVKKALLRAQNPAEKHVISTAFAAVAVLCGVLLY
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LLLTETVSADQLAGALLLVTIGAALWLIIQPLRHPQVSSEEKRKVLAFIPIFVCSTAFWA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHE
VQAQTYGVLAVYSQERVDRMVGDFEIPAAWSQSLNPFFILALSIPISLWFMRGSRAPRVK
EEECCCCEEEEECHHHHHHHHCCCCCCCHHHCCCCCEEEEEEHHHHHEEEEECCCCCEEE
IGISIGVIIAGSGLLVLIPFVGMPLAPVWVLPLSVFLISLGELFIGPGGMAATAHHAPRI
EEEEEEEEEECCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
FATRFSALYFLTLAIGMSIAGNVSKFYDPTNHTSELRYFAVFGISIIVIGVGSLMVAKKV
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]