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The map label for this gene is lppS

Identifier: 62391314

GI number: 62391314

Start: 2592644

End: 2593855

Strand: Reverse

Name: lppS

Synonym: cg2720

Alternate gene names: NA

Gene position: 2593855-2592644 (Counterclockwise)

Preceding gene: 62391316

Following gene: 62391313

Centisome position: 79.02

GC content: 53.38

Gene sequence:

>1212_bases
GTGCGGGTTTTTCGTGGTAGGCGCGGAGCAGTAGCAGGATCTTTTCTTGCAGTGCTGGCAATTGGTTCACTGGCGCTTAC
GGGTTGCACAATTGAACGAAGCGATGCGCAGGAGCAATCCTCGCAGCAAAGTACAGAAGTTGAAGCTGAAGAAGCTCAAG
CTCCTGTGATTTCTGTTGATGATGGTGATGAGGATGTGGACCCTTCGGAATCTGTCATCGTAAAGTCGATGGGTGACGGT
CTGAGCAAGGTCACCATGACTAATGAAGAAGGCTATGAGGTTGAGTCAGAGCTTTCTGACGATGGCCGTAGCTGGACCAC
TGCGGAAACCCTTGGCTACAACCGCACGTACACCATTAAGGCAACCGATAAGAACGGCGAGACCGCTACTGCGTCTTTTA
GTACTGCAACCCCTGCAGCTACCACAAACGTGGCGCTTTCTCCGCTGGCTGATTCTGTCGTTGGTGTTGGCCAGACTATC
GGTTTCCGTTTTGGTTCCCCTGTGAAGGATCGCAAGGCGGCTCAGGATGCTATTACTGTGACAACTTCACCAAAGGTGGA
GGGTGGCTTTTACTGGTTGAACAACAGTGAGTTGCGCTGGCGTCCAGCGGAGTACTGGGAGCCAGGTACTGAAGTTACGG
TCGAGGCTGACATTTACGGCAAGGATCTCGGCGGCGGTGTCTGGGGCGAAACTGATAACGCCACCAACTTCACCATTGGT
GACAAGGTTGAGGCTGTGGCAGATGATGCCACCAAGACCATGAGTGTGTACAAGAACGGTGAGTTGCTGCGCACTATGCC
GGTATCCTTTGGTCGTGACACCTCTGAGTGGGCAACGCCAAACGGTACCTACATCATTGGTGATCGCAATGAGTCGATGA
TCATGGACTCCACCACCTTCGGTCTGGGATATGAGGAGGGTGGCTACCGCACTCCGGTGAAGTACGCGACCCAGATGTCC
TATTCTGGAATTTACGTGCACGCAGCACCGTGGTCTGTAGGTGCGCAAGGTAGCTACAACACCTCACATGGTTGCATCAA
TGTATCCACCGAAAATGCTCAGTGGTTCCAGGAGGCCGTGAAGCGCGGTGACATTGTGACCGTGAAAAACACCATCGGTG
AGACTTTGAGTGGCTACGACGGACTGGGGGACTGGAACATTCCATGGTCTGAATGGAGCAAGGGGAACGCGGATCAAACT
TCGGCGTGGTAA

Upstream 100 bases:

>100_bases
GGTTTCTAGCAGTTCTCCGCCTTGGTTTTCACCGCACGGAGGGGGCTTACAGAACTGGCGCTTTTTAAGTTGTGGCAATT
TTGCCAGAAGGGCGTAACAG

Downstream 100 bases:

>100_bases
CTGCGGAAGTCGCAGGTAAAATCAGTGGGTAGATATTAATATTGCCTGCATTAATCGTCTGAACTAGACTAACAACCTGT
TTTTAAAACCGGCGGTCGTC

Product: ErfK/YbiS/YcfS/YnhG family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MRVFRGRRGAVAGSFLAVLAIGSLALTGCTIERSDAQEQSSQQSTEVEAEEAQAPVISVDDGDEDVDPSESVIVKSMGDG
LSKVTMTNEEGYEVESELSDDGRSWTTAETLGYNRTYTIKATDKNGETATASFSTATPAATTNVALSPLADSVVGVGQTI
GFRFGSPVKDRKAAQDAITVTTSPKVEGGFYWLNNSELRWRPAEYWEPGTEVTVEADIYGKDLGGGVWGETDNATNFTIG
DKVEAVADDATKTMSVYKNGELLRTMPVSFGRDTSEWATPNGTYIIGDRNESMIMDSTTFGLGYEEGGYRTPVKYATQMS
YSGIYVHAAPWSVGAQGSYNTSHGCINVSTENAQWFQEAVKRGDIVTVKNTIGETLSGYDGLGDWNIPWSEWSKGNADQT
SAW

Sequences:

>Translated_403_residues
MRVFRGRRGAVAGSFLAVLAIGSLALTGCTIERSDAQEQSSQQSTEVEAEEAQAPVISVDDGDEDVDPSESVIVKSMGDG
LSKVTMTNEEGYEVESELSDDGRSWTTAETLGYNRTYTIKATDKNGETATASFSTATPAATTNVALSPLADSVVGVGQTI
GFRFGSPVKDRKAAQDAITVTTSPKVEGGFYWLNNSELRWRPAEYWEPGTEVTVEADIYGKDLGGGVWGETDNATNFTIG
DKVEAVADDATKTMSVYKNGELLRTMPVSFGRDTSEWATPNGTYIIGDRNESMIMDSTTFGLGYEEGGYRTPVKYATQMS
YSGIYVHAAPWSVGAQGSYNTSHGCINVSTENAQWFQEAVKRGDIVTVKNTIGETLSGYDGLGDWNIPWSEWSKGNADQT
SAW
>Mature_403_residues
MRVFRGRRGAVAGSFLAVLAIGSLALTGCTIERSDAQEQSSQQSTEVEAEEAQAPVISVDDGDEDVDPSESVIVKSMGDG
LSKVTMTNEEGYEVESELSDDGRSWTTAETLGYNRTYTIKATDKNGETATASFSTATPAATTNVALSPLADSVVGVGQTI
GFRFGSPVKDRKAAQDAITVTTSPKVEGGFYWLNNSELRWRPAEYWEPGTEVTVEADIYGKDLGGGVWGETDNATNFTIG
DKVEAVADDATKTMSVYKNGELLRTMPVSFGRDTSEWATPNGTYIIGDRNESMIMDSTTFGLGYEEGGYRTPVKYATQMS
YSGIYVHAAPWSVGAQGSYNTSHGCINVSTENAQWFQEAVKRGDIVTVKNTIGETLSGYDGLGDWNIPWSEWSKGNADQT
SAW

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 43401; Mature: 43401

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVFRGRRGAVAGSFLAVLAIGSLALTGCTIERSDAQEQSSQQSTEVEAEEAQAPVISVD
CCCCCCCCCCHHHHHHHHHHHHHHHEECEEEECCCHHHHHHHHHCCCCHHHHCCCEEEEC
DGDEDVDPSESVIVKSMGDGLSKVTMTNEEGYEVESELSDDGRSWTTAETLGYNRTYTIK
CCCCCCCCCHHEEEEHHCCCCEEEEEECCCCCEEHHHHCCCCCCEEEHHHCCCCEEEEEE
ATDKNGETATASFSTATPAATTNVALSPLADSVVGVGQTIGFRFGSPVKDRKAAQDAITV
EECCCCCEEEEECCCCCCCCCCCEEECHHHHHHHHCCHHCCCCCCCCHHHHHHCCCEEEE
TTSPKVEGGFYWLNNSELRWRPAEYWEPGTEVTVEADIYGKDLGGGVWGETDNATNFTIG
EECCCCCCCEEEECCCCEEEECHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEC
DKVEAVADDATKTMSVYKNGELLRTMPVSFGRDTSEWATPNGTYIIGDRNESMIMDSTTF
CCHHHHHCCHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCCCEEEECCCCCEEEECCEE
GLGYEEGGYRTPVKYATQMSYSGIYVHAAPWSVGAQGSYNTSHGCINVSTENAQWFQEAV
CCCCCCCCCCCCHHHHHEECCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHH
KRGDIVTVKNTIGETLSGYDGLGDWNIPWSEWSKGNADQTSAW
HCCCEEEEHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRVFRGRRGAVAGSFLAVLAIGSLALTGCTIERSDAQEQSSQQSTEVEAEEAQAPVISVD
CCCCCCCCCCHHHHHHHHHHHHHHHEECEEEECCCHHHHHHHHHCCCCHHHHCCCEEEEC
DGDEDVDPSESVIVKSMGDGLSKVTMTNEEGYEVESELSDDGRSWTTAETLGYNRTYTIK
CCCCCCCCCHHEEEEHHCCCCEEEEEECCCCCEEHHHHCCCCCCEEEHHHCCCCEEEEEE
ATDKNGETATASFSTATPAATTNVALSPLADSVVGVGQTIGFRFGSPVKDRKAAQDAITV
EECCCCCEEEEECCCCCCCCCCCEEECHHHHHHHHCCHHCCCCCCCCHHHHHHCCCEEEE
TTSPKVEGGFYWLNNSELRWRPAEYWEPGTEVTVEADIYGKDLGGGVWGETDNATNFTIG
EECCCCCCCEEEECCCCEEEECHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEC
DKVEAVADDATKTMSVYKNGELLRTMPVSFGRDTSEWATPNGTYIIGDRNESMIMDSTTF
CCHHHHHCCHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCCCEEEECCCCCEEEECCEE
GLGYEEGGYRTPVKYATQMSYSGIYVHAAPWSVGAQGSYNTSHGCINVSTENAQWFQEAV
CCCCCCCCCCCCHHHHHEECCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHH
KRGDIVTVKNTIGETLSGYDGLGDWNIPWSEWSKGNADQTSAW
HCCCEEEEHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]