| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is 62391222
Identifier: 62391222
GI number: 62391222
Start: 2493340
End: 2493927
Strand: Reverse
Name: 62391222
Synonym: cg2612
Alternate gene names: NA
Gene position: 2493927-2493340 (Counterclockwise)
Preceding gene: 62391223
Following gene: 62391220
Centisome position: 75.97
GC content: 55.44
Gene sequence:
>588_bases ATGACTTCGCTTTTCGACGCCCCAACCCTCCAACGCGTCACCGTTTTCACGGGCTCGGCGCTCGGCAGTTCCTCGCTGTA CACGCAAGCGGCTCAAACCTTGGCGAAAACCGCGGTAGACCGCGGCATCGACTTGGTTTACGGTGGCGGAAAAGTGGGGC TCATGGGTATCGTCGCGGATGCGTTCCTGGAATCAGGTGGCGAAGCCTTTGGCGTCATCACGGAATCACTTATGAAGGGT GAGCTTGGGCATGAAAAGCTCACCGAACTTGAAATCGTTCCTGATATGCACATCCGCAAGCGTCGCATGGCAGAACTTGG CGATGGTTTTATCGCCATGCCCGGTGGCGCCGGCACCTTGGAAGAACTTTTCGAGGTCTGGACCTGGCAACAGCTGGGCA TTCATCAAAAGCCCGTCGCACTTTATGATGTCGATGGTTTTTGGCAGCCCCTGCTGGAAATGCTTGAGCAGATGACCCAG CGTGGATTTATCAAGCGAGACTTCTTTGAGTGCCTCATCGTGGAATCCGACCCGCATGCCCTGCTAAAGGCAATGCAGAC CTGGACTCCACCAGCACCAAAATGGTAA
Upstream 100 bases:
>100_bases CTGGAGATTTCCGATTTCCAGCGCGCCCGCATCGACGCGAATGCTCAGGAATTGCAGGCCGAGCGCGAGGCAGTGCGCGA CTTGCTCTAATCTTTAACGC
Downstream 100 bases:
>100_bases CTAAATTGTGTGCTCGACGGTAACGCCGCCGAGTATCTTGATGGAAATGGAAGCCACGCCGTTGTCATTGACTGTGATGG TTTCTTCTACTTCTGGGCCA
Product: Rossmann fold nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTSLFDAPTLQRVTVFTGSALGSSSLYTQAAQTLAKTAVDRGIDLVYGGGKVGLMGIVADAFLESGGEAFGVITESLMKG ELGHEKLTELEIVPDMHIRKRRMAELGDGFIAMPGGAGTLEELFEVWTWQQLGIHQKPVALYDVDGFWQPLLEMLEQMTQ RGFIKRDFFECLIVESDPHALLKAMQTWTPPAPKW
Sequences:
>Translated_195_residues MTSLFDAPTLQRVTVFTGSALGSSSLYTQAAQTLAKTAVDRGIDLVYGGGKVGLMGIVADAFLESGGEAFGVITESLMKG ELGHEKLTELEIVPDMHIRKRRMAELGDGFIAMPGGAGTLEELFEVWTWQQLGIHQKPVALYDVDGFWQPLLEMLEQMTQ RGFIKRDFFECLIVESDPHALLKAMQTWTPPAPKW >Mature_194_residues TSLFDAPTLQRVTVFTGSALGSSSLYTQAAQTLAKTAVDRGIDLVYGGGKVGLMGIVADAFLESGGEAFGVITESLMKGE LGHEKLTELEIVPDMHIRKRRMAELGDGFIAMPGGAGTLEELFEVWTWQQLGIHQKPVALYDVDGFWQPLLEMLEQMTQR GFIKRDFFECLIVESDPHALLKAMQTWTPPAPKW
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LOG family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322406, Length=211, Percent_Identity=36.9668246445498, Blast_Score=140, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005269 [H]
Pfam domain/function: PF03641 Lysine_decarbox [H]
EC number: NA
Molecular weight: Translated: 21491; Mature: 21360
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLFDAPTLQRVTVFTGSALGSSSLYTQAAQTLAKTAVDRGIDLVYGGGKVGLMGIVAD CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHH AFLESGGEAFGVITESLMKGELGHEKLTELEIVPDMHIRKRRMAELGDGFIAMPGGAGTL HHHHCCCCCHHHHHHHHHHCCCCHHHHHHEECCCCHHHHHHHHHHHCCCEEECCCCCCHH EELFEVWTWQQLGIHQKPVALYDVDGFWQPLLEMLEQMTQRGFIKRDFFECLIVESDPHA HHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHEEEECCCHHH LLKAMQTWTPPAPKW HHHHHHHCCCCCCCC >Mature Secondary Structure TSLFDAPTLQRVTVFTGSALGSSSLYTQAAQTLAKTAVDRGIDLVYGGGKVGLMGIVAD CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHH AFLESGGEAFGVITESLMKGELGHEKLTELEIVPDMHIRKRRMAELGDGFIAMPGGAGTL HHHHCCCCCHHHHHHHHHHCCCCHHHHHHEECCCCHHHHHHHHHHHCCCEEECCCCCCHH EELFEVWTWQQLGIHQKPVALYDVDGFWQPLLEMLEQMTQRGFIKRDFFECLIVESDPHA HHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHEEEECCCHHH LLKAMQTWTPPAPKW HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 2116366 [H]