| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is glmS [H]
Identifier: 62391112
GI number: 62391112
Start: 2373816
End: 2375693
Strand: Reverse
Name: glmS [H]
Synonym: cg2492
Alternate gene names: 62391112
Gene position: 2375693-2373816 (Counterclockwise)
Preceding gene: 62391114
Following gene: 62391109
Centisome position: 72.37
GC content: 53.62
Gene sequence:
>1878_bases ATGCGCATGTGTGGAATTGTTGGATATATTGGCCAAGCGGGCGACTCCCGTGATTACTTTGCTCTAGATGTAGTTGTTGA AGGACTACGTCGCCTGGAATACCGCGGATATGACTCCGCAGGTATTGCTATTCACGCCAATGGTGAGATTAGCTACCGAA AGAAGGCCGGAAAGGTTGCTGCACTAGATGCAGAAATCGCTAAAGCACCTCTTCCAGATTCTATTTTGGGAATTGGACAC ACCCGTTGGGCAACTCATGGTGGCCCAACCGATGTCAACGCTCACCCCCACGTTGTTTCCAATGGCAAGCTTGCCGTAGT ACACAACGGCATCATCGAAAACTTTGCGGAACTGCGCTCTGAGCTTTCCGCTAAGGGCTACAACTTTGTATCCGATACCG ATACCGAAGTTGCTGCTTCTTTGCTTGCTGAAATTTACAATACTCAGGCAAACGGTGACCTCACCCTTGCTATGCAGCTG ACCGGTCAGCGCCTTGAGGGTGCTTTCACCCTGCTAGCTATTCATGCTGATCACGATGACCGCATCGTTGCAGCTCGTCG TAACTCTCCTTTGGTTATCGGCGTCGGCGAGGGCGAGAACTTCCTCGGATCTGACGTTTCTGGCTTTATTGATTACACCC GCAAGGCTGTAGAGCTGGCTAATGACCAGGTTGTTACCATCACCGCTGATGATTACGCCATCACCAACTTTGATGGATCA GAAGCAGTTGGCAAGCCTTTCGACGTGGAGTGGGACGCTGCAGCTGCTGAAAAGGGTGGCTTCGGTTCCTTCATGGAGAA GGAAATCCACGATCAGCCAGCAGCTGTTCGCGATACCCTGATGGGCCGTCTTGATGAAGATGGCAAGCTCGTTCTTGATG AGCTGCGCATCGATGAAGCTATTCTGCGTAGTGTCGACAAGATCGTCATTGTTGCTTGTGGTACTGCAGCTTATGCAGGC CAGGTTGCTCGTTACGCCATTGAGCACTGGTGCCGCATCCCAACCGAGGTGGAGCTGGCTCACGAGTTCCGTTACCGCGA CCCAATCCTCAACGAGAAGACCCTTGTTGTGGCATTGTCCCAGTCCGGCGAGACCATGGATACCCTCATGGCTGTTCGCC ACGCACGTGAGCAGGGTGCCAAGGTTGTTGCTATTTGTAACACTGTTGGATCCACTCTTCCACGTGAAGCAGATGCGTCC CTGTACACCTACGCTGGCCCTGAGATCGCTGTGGCGTCCACCAAGGCGTTCTTGGCTCAGATCACTGCTTCTTACTTGCT TGGCCTGTACTTGGCTCAGCTGCGCGGCAACAAGTTCGCTGATGAGGTTTCTTCCATTCTGGACAGCCTGCGTGAGATGC CTGAGAAGATTCAGCAGGTCATCGATGCAGAAGAGCAGATCAAGAAGCTTGGCCAAGATATGGCAGATGCTAAGTCTGTG CTGTTCCTGGGCCGCCACGTTGGTTTCCCAGTTGCGCTTGAGGGTGCGTTGAAGCTCAAGGAGATCGCATACCTGCACGC TGAAGGTTTCGCTGCAGGCGAGCTCAAGCACGGCCCAATTGCTTTGGTTGAGGAAGGCCAGCCGATCTTCGTTATCGTGC CTTCACCTCGTGGTCGCGATTCCCTGCACTCCAAGGTTGTCTCCAACATTCAGGAGATCCGTGCACGTGGCGCTGTCACC ATCGTGATTGCAGAGGAAGGCGATGAGGCTGTCAACGATTACGCCAACTTCATCATCCGCATTCCTCAGGCCCCAACCCT GATGCAGCCTCTGCTGTCCACCGTGCCTCTGCAGATCTTTGCGTGCGCTGTGGCAACCGCAAAGGGCTACAACGTGGATC AGCCTCGTAACCTGGCAAAGTCTGTCACCGTCGAATAA
Upstream 100 bases:
>100_bases TTGCGTGCTGCAACTTAATTATGGTCCTCCCAGCTCAGTGTGCTGTGTGGATTGTTTATTCTCGTCCATTAAGTGATCGA GAAAAAGTTGTTGTAAAGTC
Downstream 100 bases:
>100_bases AAAGATTTCGCTTCTCGACGCCAAGTGCCGCCCCAAGGGGCGGCACTTGTGGTGTTTTTAGCGACGGTTGAAGCGCAGAT CAACGCCTAGATCATCGCAG
Product: glucosamine--fructose-6-phosphate aminotransferase
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 625; Mature: 625
Protein sequence:
>625_residues MRMCGIVGYIGQAGDSRDYFALDVVVEGLRRLEYRGYDSAGIAIHANGEISYRKKAGKVAALDAEIAKAPLPDSILGIGH TRWATHGGPTDVNAHPHVVSNGKLAVVHNGIIENFAELRSELSAKGYNFVSDTDTEVAASLLAEIYNTQANGDLTLAMQL TGQRLEGAFTLLAIHADHDDRIVAARRNSPLVIGVGEGENFLGSDVSGFIDYTRKAVELANDQVVTITADDYAITNFDGS EAVGKPFDVEWDAAAAEKGGFGSFMEKEIHDQPAAVRDTLMGRLDEDGKLVLDELRIDEAILRSVDKIVIVACGTAAYAG QVARYAIEHWCRIPTEVELAHEFRYRDPILNEKTLVVALSQSGETMDTLMAVRHAREQGAKVVAICNTVGSTLPREADAS LYTYAGPEIAVASTKAFLAQITASYLLGLYLAQLRGNKFADEVSSILDSLREMPEKIQQVIDAEEQIKKLGQDMADAKSV LFLGRHVGFPVALEGALKLKEIAYLHAEGFAAGELKHGPIALVEEGQPIFVIVPSPRGRDSLHSKVVSNIQEIRARGAVT IVIAEEGDEAVNDYANFIIRIPQAPTLMQPLLSTVPLQIFACAVATAKGYNVDQPRNLAKSVTVE
Sequences:
>Translated_625_residues MRMCGIVGYIGQAGDSRDYFALDVVVEGLRRLEYRGYDSAGIAIHANGEISYRKKAGKVAALDAEIAKAPLPDSILGIGH TRWATHGGPTDVNAHPHVVSNGKLAVVHNGIIENFAELRSELSAKGYNFVSDTDTEVAASLLAEIYNTQANGDLTLAMQL TGQRLEGAFTLLAIHADHDDRIVAARRNSPLVIGVGEGENFLGSDVSGFIDYTRKAVELANDQVVTITADDYAITNFDGS EAVGKPFDVEWDAAAAEKGGFGSFMEKEIHDQPAAVRDTLMGRLDEDGKLVLDELRIDEAILRSVDKIVIVACGTAAYAG QVARYAIEHWCRIPTEVELAHEFRYRDPILNEKTLVVALSQSGETMDTLMAVRHAREQGAKVVAICNTVGSTLPREADAS LYTYAGPEIAVASTKAFLAQITASYLLGLYLAQLRGNKFADEVSSILDSLREMPEKIQQVIDAEEQIKKLGQDMADAKSV LFLGRHVGFPVALEGALKLKEIAYLHAEGFAAGELKHGPIALVEEGQPIFVIVPSPRGRDSLHSKVVSNIQEIRARGAVT IVIAEEGDEAVNDYANFIIRIPQAPTLMQPLLSTVPLQIFACAVATAKGYNVDQPRNLAKSVTVE >Mature_625_residues MRMCGIVGYIGQAGDSRDYFALDVVVEGLRRLEYRGYDSAGIAIHANGEISYRKKAGKVAALDAEIAKAPLPDSILGIGH TRWATHGGPTDVNAHPHVVSNGKLAVVHNGIIENFAELRSELSAKGYNFVSDTDTEVAASLLAEIYNTQANGDLTLAMQL TGQRLEGAFTLLAIHADHDDRIVAARRNSPLVIGVGEGENFLGSDVSGFIDYTRKAVELANDQVVTITADDYAITNFDGS EAVGKPFDVEWDAAAAEKGGFGSFMEKEIHDQPAAVRDTLMGRLDEDGKLVLDELRIDEAILRSVDKIVIVACGTAAYAG QVARYAIEHWCRIPTEVELAHEFRYRDPILNEKTLVVALSQSGETMDTLMAVRHAREQGAKVVAICNTVGSTLPREADAS LYTYAGPEIAVASTKAFLAQITASYLLGLYLAQLRGNKFADEVSSILDSLREMPEKIQQVIDAEEQIKKLGQDMADAKSV LFLGRHVGFPVALEGALKLKEIAYLHAEGFAAGELKHGPIALVEEGQPIFVIVPSPRGRDSLHSKVVSNIQEIRARGAVT IVIAEEGDEAVNDYANFIIRIPQAPTLMQPLLSTVPLQIFACAVATAKGYNVDQPRNLAKSVTVE
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG0449
COG function: function code M; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI4826742, Length=690, Percent_Identity=35.0724637681159, Blast_Score=417, Evalue=1e-116, Organism=Homo sapiens, GI205277386, Length=686, Percent_Identity=36.0058309037901, Blast_Score=410, Evalue=1e-114, Organism=Homo sapiens, GI29570798, Length=198, Percent_Identity=31.8181818181818, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1790167, Length=626, Percent_Identity=44.7284345047923, Blast_Score=489, Evalue=1e-139, Organism=Escherichia coli, GI87082251, Length=328, Percent_Identity=22.5609756097561, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17539970, Length=718, Percent_Identity=32.8690807799443, Blast_Score=359, Evalue=2e-99, Organism=Caenorhabditis elegans, GI17532899, Length=724, Percent_Identity=33.0110497237569, Blast_Score=354, Evalue=7e-98, Organism=Caenorhabditis elegans, GI17532897, Length=738, Percent_Identity=32.9268292682927, Blast_Score=347, Evalue=1e-95, Organism=Saccharomyces cerevisiae, GI6322745, Length=436, Percent_Identity=38.7614678899083, Blast_Score=280, Evalue=5e-76, Organism=Saccharomyces cerevisiae, GI6323731, Length=432, Percent_Identity=28.4722222222222, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6323730, Length=205, Percent_Identity=41.9512195121951, Blast_Score=147, Evalue=6e-36, Organism=Drosophila melanogaster, GI21357745, Length=688, Percent_Identity=34.593023255814, Blast_Score=403, Evalue=1e-112, Organism=Drosophila melanogaster, GI28573187, Length=145, Percent_Identity=33.7931034482759, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 67503; Mature: 67503
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMCGIVGYIGQAGDSRDYFALDVVVEGLRRLEYRGYDSAGIAIHANGEISYRKKAGKVA CCCCCHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEHHCCCCEE ALDAEIAKAPLPDSILGIGHTRWATHGGPTDVNAHPHVVSNGKLAVVHNGIIENFAELRS EECHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECHHHHHHHHHHH ELSAKGYNFVSDTDTEVAASLLAEIYNTQANGDLTLAMQLTGQRLEGAFTLLAIHADHDD HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCC RIVAARRNSPLVIGVGEGENFLGSDVSGFIDYTRKAVELANDQVVTITADDYAITNFDGS EEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCCC EAVGKPFDVEWDAAAAEKGGFGSFMEKEIHDQPAAVRDTLMGRLDEDGKLVLDELRIDEA CCCCCCCCCCCCCHHCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHH ILRSVDKIVIVACGTAAYAGQVARYAIEHWCRIPTEVELAHEFRYRDPILNEKTLVVALS HHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEC QSGETMDTLMAVRHAREQGAKVVAICNTVGSTLPREADASLYTYAGPEIAVASTKAFLAQ CCCCHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCCEEEECCCCEEEHHHHHHHHH ITASYLLGLYLAQLRGNKFADEVSSILDSLREMPEKIQQVIDAEEQIKKLGQDMADAKSV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH LFLGRHVGFPVALEGALKLKEIAYLHAEGFAAGELKHGPIALVEEGQPIFVIVPSPRGRD HHHHHHCCCCEEECCHHHHHHHHEECCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCH SLHSKVVSNIQEIRARGAVTIVIAEEGDEAVNDYANFIIRIPQAPTLMQPLLSTVPLQIF HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHH ACAVATAKGYNVDQPRNLAKSVTVE HHHHHHCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure MRMCGIVGYIGQAGDSRDYFALDVVVEGLRRLEYRGYDSAGIAIHANGEISYRKKAGKVA CCCCCHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEHHCCCCEE ALDAEIAKAPLPDSILGIGHTRWATHGGPTDVNAHPHVVSNGKLAVVHNGIIENFAELRS EECHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECHHHHHHHHHHH ELSAKGYNFVSDTDTEVAASLLAEIYNTQANGDLTLAMQLTGQRLEGAFTLLAIHADHDD HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCC RIVAARRNSPLVIGVGEGENFLGSDVSGFIDYTRKAVELANDQVVTITADDYAITNFDGS EEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCCC EAVGKPFDVEWDAAAAEKGGFGSFMEKEIHDQPAAVRDTLMGRLDEDGKLVLDELRIDEA CCCCCCCCCCCCCHHCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHH ILRSVDKIVIVACGTAAYAGQVARYAIEHWCRIPTEVELAHEFRYRDPILNEKTLVVALS HHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEC QSGETMDTLMAVRHAREQGAKVVAICNTVGSTLPREADASLYTYAGPEIAVASTKAFLAQ CCCCHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCCEEEECCCCEEEHHHHHHHHH ITASYLLGLYLAQLRGNKFADEVSSILDSLREMPEKIQQVIDAEEQIKKLGQDMADAKSV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH LFLGRHVGFPVALEGALKLKEIAYLHAEGFAAGELKHGPIALVEEGQPIFVIVPSPRGRD HHHHHHCCCCEEECCHHHHHHHHEECCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCH SLHSKVVSNIQEIRARGAVTIVIAEEGDEAVNDYANFIIRIPQAPTLMQPLLSTVPLQIF HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHH ACAVATAKGYNVDQPRNLAKSVTVE HHHHHHCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]