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The map label for this gene is ydhO [C]

Identifier: 62391028

GI number: 62391028

Start: 2291637

End: 2292266

Strand: Reverse

Name: ydhO [C]

Synonym: cg2402

Alternate gene names: 62391028

Gene position: 2292266-2291637 (Counterclockwise)

Preceding gene: 62391029

Following gene: 62391027

Centisome position: 69.83

GC content: 57.62

Gene sequence:

>630_bases
GTGGGTAAGCACCGTCGCAACAATTCAAACGCAACTCGCAAGGCTGTAGCAGCATCTGCAGTTGCGCTTGGAGCAACCGC
AGCTATCGCCTCCCCAGCACAGGCAGCTGAGGTTGTTGTTCCTGGCACCGGAATCAGCGTTGACATCGCTGGCATCGAGA
CCACTCCAGGTCTTAACAACGTTCCAGGAATCGATCAGTGGATCCCTTCCCTTAGCAGCCAGGCAGCTCCTACTGCTTAC
GCAGCCGTCATTGATGCACCTGCAGCACAGGCTGCACCTGCAGCAAGCACCGGTCAGGCAATCGTTGATGCAGCGCGCAC
CAAGATTGGTTCCCCATACGGTTGGGGTGCTACCGGTCCTAACGCTTTCGACTGCTCCGGCCTTACCTCATGGGCATACA
GCCAGGTTGGCAAGTCCATCCCACGTACCTCCCAGGCTCAGGCTGCACAGGGCACCCCTGTTGCTTACTCTGACCTTCAG
GCTGGCGACATCGTTGCGTTCTACTCCGGCGCTACCCACGTTGGTATCTACTCCGGCCACGGCACCGTTATCCACGCACT
GAACAGCAGCACCCCTCTGTCTGAGCACTCCTTGGATTACATGCCATTCCACTCTGCAGTTCGTTTCTAA

Upstream 100 bases:

>100_bases
GGTTCTCTCGCAGAGAGAGAAGGAGTGGGGATAGGGGCCTTCCGCTCCGAACCCGACAGCTAACTCGGTCAGCAAACAGG
AAGAATTTGGAGTTTCATCA

Downstream 100 bases:

>100_bases
TCTGCATAAAGTCTTAAGCTTTTGAAGCAAGCCGCACTCCTTGAAAAAGTTGAGAGCGGCTTGCTTCTTTTCCTTGGCTA
GGCTTTTGTAATCGGGTTAG

Product: NPL/P60 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MGKHRRNNSNATRKAVAASAVALGATAAIASPAQAAEVVVPGTGISVDIAGIETTPGLNNVPGIDQWIPSLSSQAAPTAY
AAVIDAPAAQAAPAASTGQAIVDAARTKIGSPYGWGATGPNAFDCSGLTSWAYSQVGKSIPRTSQAQAAQGTPVAYSDLQ
AGDIVAFYSGATHVGIYSGHGTVIHALNSSTPLSEHSLDYMPFHSAVRF

Sequences:

>Translated_209_residues
MGKHRRNNSNATRKAVAASAVALGATAAIASPAQAAEVVVPGTGISVDIAGIETTPGLNNVPGIDQWIPSLSSQAAPTAY
AAVIDAPAAQAAPAASTGQAIVDAARTKIGSPYGWGATGPNAFDCSGLTSWAYSQVGKSIPRTSQAQAAQGTPVAYSDLQ
AGDIVAFYSGATHVGIYSGHGTVIHALNSSTPLSEHSLDYMPFHSAVRF
>Mature_208_residues
GKHRRNNSNATRKAVAASAVALGATAAIASPAQAAEVVVPGTGISVDIAGIETTPGLNNVPGIDQWIPSLSSQAAPTAYA
AVIDAPAAQAAPAASTGQAIVDAARTKIGSPYGWGATGPNAFDCSGLTSWAYSQVGKSIPRTSQAQAAQGTPVAYSDLQA
GDIVAFYSGATHVGIYSGHGTVIHALNSSTPLSEHSLDYMPFHSAVRF

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=107, Percent_Identity=37.3831775700935, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 21044; Mature: 20913

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKHRRNNSNATRKAVAASAVALGATAAIASPAQAAEVVVPGTGISVDIAGIETTPGLNN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCC
VPGIDQWIPSLSSQAAPTAYAAVIDAPAAQAAPAASTGQAIVDAARTKIGSPYGWGATGP
CCCHHHHHHHHCCCCCCHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
NAFDCSGLTSWAYSQVGKSIPRTSQAQAAQGTPVAYSDLQAGDIVAFYSGATHVGIYSGH
CCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCEECCCCCCCEEEEECCCCEEEEECCC
GTVIHALNSSTPLSEHSLDYMPFHSAVRF
CEEEEEECCCCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
GKHRRNNSNATRKAVAASAVALGATAAIASPAQAAEVVVPGTGISVDIAGIETTPGLNN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCC
VPGIDQWIPSLSSQAAPTAYAAVIDAPAAQAAPAASTGQAIVDAARTKIGSPYGWGATGP
CCCHHHHHHHHCCCCCCHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
NAFDCSGLTSWAYSQVGKSIPRTSQAQAAQGTPVAYSDLQAGDIVAFYSGATHVGIYSGH
CCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCEECCCCCCCEEEEECCCCEEEEECCC
GTVIHALNSSTPLSEHSLDYMPFHSAVRF
CEEEEEECCCCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA