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The map label for this gene is ydhO [C]

Identifier: 62391027

GI number: 62391027

Start: 2290473

End: 2291492

Strand: Reverse

Name: ydhO [C]

Synonym: cg2401

Alternate gene names: 62391027

Gene position: 2291492-2290473 (Counterclockwise)

Preceding gene: 62391028

Following gene: 62391026

Centisome position: 69.8

GC content: 52.25

Gene sequence:

>1020_bases
ATGTTTGGTCGCCGTTGGGTGAGCGTTGTGGCGTCATGTGTTATCGCAAGCACGCTGATTCTGGTGCCTTCGCATTCCGG
TGCGGAGGAAGTCGATCAACTGATTGCTGATATCGAGCATGTCTCTCAGGAAACGTCTGCCCAGAATGAGGAAGTCAAAC
AGCTTGAGATTGATATTGAGGCTCGTGAGGTCACGATCAAGGAAGTTCAGGAGCAGTCGGTAAGCTACCGTGAGGCGGCT
GATCAAGCATCGGAGAATGTCGAAGCTTATCGTTCGGAGATCAATCGGATCGCTCAGGCGAAGTATCGTGGCACAGTCAC
GGATCCTTTGAGCATTGCGGTGTCTGCAGAAGATCCACAAAACGTGATTGATCGGATGAGCTACCTTTCAACGTTGACTA
AGTCCACTAGTGATGTGGTTGAATCCCTCAACGCGGAGACTGAGAAGTCCGCAGAAGCTGTGTATCAAGCAAACCGTACT
AAGGCGGAAGCGGAGTTCCAGTTGGGGCAGCTGAAGGTACGCCAGGCGGAGCTTGAATCTGAAAAGGAAGCATTGGATGG
TCGAAAATCGGAGATCCGAGACCGGGTGGATGCCCTGACGCCACAGGAGCGGGAAATGTGGGTTGCTAAGAATGGTCCAT
TGGACATTGATCTGACTGATTTGCTTGGTCTTTCCGCTGCGACTTCGGGTGCGGTGGATGCTGCCTTGTCTAAGTTGGGA
AGCCCTTATGGTTGGGGTGGCATTGGCCCAAATGAGTTTGATTGCTCAGGTTTGATCTATTGGGCGTATCAGCAGATGGG
TAAGACTTTGCCACGTACGTCTCAAGCTCAGATGGCTGGCGGAACGCCGGTGAGCAGAGATGAGCTGCAGCCTGGCGATG
TCATTGGATATTACCCAGGTGCTACTCACGTGGGACTGTATATTGGGGACGGAAAGATTGTGCACGCCTCAGACTACGGA
ATCCCTGTGCAGGTGGTATCTGTTGATTCAGCACCGTTTTATGGTGCGCGTCGCTACTAA

Upstream 100 bases:

>100_bases
AAAAGTTGAGAGCGGCTTGCTTCTTTTCCTTGGCTAGGCTTTTGTAATCGGGTTAGAGTAGTGGAGTTGCTTGAATGAGG
TTGATAGGGGATTTTTGAAG

Downstream 100 bases:

>100_bases
GAAATAGTTCGTCAGGAGAATCTTTGTGTCTGCATCCCGAAAAACTCTCGTTGTGACCAATGATTTTCCTCCACGGATCG
GCGGAATCCAAAGCTATTTG

Product: protein NLP/P60 family, peptidoglycan lytic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MFGRRWVSVVASCVIASTLILVPSHSGAEEVDQLIADIEHVSQETSAQNEEVKQLEIDIEAREVTIKEVQEQSVSYREAA
DQASENVEAYRSEINRIAQAKYRGTVTDPLSIAVSAEDPQNVIDRMSYLSTLTKSTSDVVESLNAETEKSAEAVYQANRT
KAEAEFQLGQLKVRQAELESEKEALDGRKSEIRDRVDALTPQEREMWVAKNGPLDIDLTDLLGLSAATSGAVDAALSKLG
SPYGWGGIGPNEFDCSGLIYWAYQQMGKTLPRTSQAQMAGGTPVSRDELQPGDVIGYYPGATHVGLYIGDGKIVHASDYG
IPVQVVSVDSAPFYGARRY

Sequences:

>Translated_339_residues
MFGRRWVSVVASCVIASTLILVPSHSGAEEVDQLIADIEHVSQETSAQNEEVKQLEIDIEAREVTIKEVQEQSVSYREAA
DQASENVEAYRSEINRIAQAKYRGTVTDPLSIAVSAEDPQNVIDRMSYLSTLTKSTSDVVESLNAETEKSAEAVYQANRT
KAEAEFQLGQLKVRQAELESEKEALDGRKSEIRDRVDALTPQEREMWVAKNGPLDIDLTDLLGLSAATSGAVDAALSKLG
SPYGWGGIGPNEFDCSGLIYWAYQQMGKTLPRTSQAQMAGGTPVSRDELQPGDVIGYYPGATHVGLYIGDGKIVHASDYG
IPVQVVSVDSAPFYGARRY
>Mature_339_residues
MFGRRWVSVVASCVIASTLILVPSHSGAEEVDQLIADIEHVSQETSAQNEEVKQLEIDIEAREVTIKEVQEQSVSYREAA
DQASENVEAYRSEINRIAQAKYRGTVTDPLSIAVSAEDPQNVIDRMSYLSTLTKSTSDVVESLNAETEKSAEAVYQANRT
KAEAEFQLGQLKVRQAELESEKEALDGRKSEIRDRVDALTPQEREMWVAKNGPLDIDLTDLLGLSAATSGAVDAALSKLG
SPYGWGGIGPNEFDCSGLIYWAYQQMGKTLPRTSQAQMAGGTPVSRDELQPGDVIGYYPGATHVGLYIGDGKIVHASDYG
IPVQVVSVDSAPFYGARRY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787944, Length=124, Percent_Identity=35.4838709677419, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1786421, Length=128, Percent_Identity=32.8125, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 36925; Mature: 36925

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00782 TFIIB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGRRWVSVVASCVIASTLILVPSHSGAEEVDQLIADIEHVSQETSAQNEEVKQLEIDIE
CCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEH
AREVTIKEVQEQSVSYREAADQASENVEAYRSEINRIAQAKYRGTVTDPLSIAVSAEDPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH
NVIDRMSYLSTLTKSTSDVVESLNAETEKSAEAVYQANRTKAEAEFQLGQLKVRQAELES
HHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EKEALDGRKSEIRDRVDALTPQEREMWVAKNGPLDIDLTDLLGLSAATSGAVDAALSKLG
HHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCCEEHHHHHCCHHCCCHHHHHHHHHCC
SPYGWGGIGPNEFDCSGLIYWAYQQMGKTLPRTSQAQMAGGTPVSRDELQPGDVIGYYPG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCC
ATHVGLYIGDGKIVHASDYGIPVQVVSVDSAPFYGARRY
CCEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MFGRRWVSVVASCVIASTLILVPSHSGAEEVDQLIADIEHVSQETSAQNEEVKQLEIDIE
CCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEH
AREVTIKEVQEQSVSYREAADQASENVEAYRSEINRIAQAKYRGTVTDPLSIAVSAEDPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH
NVIDRMSYLSTLTKSTSDVVESLNAETEKSAEAVYQANRTKAEAEFQLGQLKVRQAELES
HHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EKEALDGRKSEIRDRVDALTPQEREMWVAKNGPLDIDLTDLLGLSAATSGAVDAALSKLG
HHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCCEEHHHHHCCHHCCCHHHHHHHHHCC
SPYGWGGIGPNEFDCSGLIYWAYQQMGKTLPRTSQAQMAGGTPVSRDELQPGDVIGYYPG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCC
ATHVGLYIGDGKIVHASDYGIPVQVVSVDSAPFYGARRY
CCEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]