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The map label for this gene is 62390810

Identifier: 62390810

GI number: 62390810

Start: 2047169

End: 2049325

Strand: Reverse

Name: 62390810

Synonym: cg2160

Alternate gene names: NA

Gene position: 2049325-2047169 (Counterclockwise)

Preceding gene: 62390811

Following gene: 62390809

Centisome position: 62.43

GC content: 56.0

Gene sequence:

>2157_bases
ATGAATGATTCCCGAAATCGCGGCCGGAAGGTTACCCGCAAGGCGGGCCCACCAGAAGCTGGTCAGGAAAACCATCTGGA
TACCCCTGTCTTTCAGGCACCAGATGCTTCCTCTAACCAGAGCGCTGTAAAAGCTGAGACCGCCGGAAACGACAATCGGG
ATGCTGCGCAAGGTGCTCAAGGATCCCAAGATTCTCAGGGTTCCCAGAACGCTCAAGGTTCCCAGAACCGCGAGTCCGGA
AACAACAACCGCAACCGTTCCAACAACAACCGTCGCGGTGGTCGTGGACGTCGTGGATCCGGAAACGCCAATGAGGGCGC
GAACAACAACAGCGGTAACCAGAACCGTCAGGGCGGAAACCGTGGCAACCGCGGTGGCGGACGCCGAAACGTTGTTAAGT
CGATGCAGGGTGCGGATCTGACCCAGCGCCTGCCAGAGCCACCAAAGGCACCGGCAAACGGTCTGCGTATTTACGCACTT
GGTGGCATTTCCGAAATCGGTCGCAACATGACCGTGTTTGAGTACAACAACCGTCTGCTCATCGTGGACTGTGGTGTGCT
CTTCCCATCTTCAGGTGAGCCAGGCGTTGACCTGATTCTTCCTGACTTCGGCCCAATTGAGGATCACCTGCACCGCGTCG
ATGCATTGGTGGTTACTCACGGACACGAAGACCACATTGGTGCTATTCCCTGGCTGCTGAAGCTGCGCAACGATATCCCA
ATCTTGGCATCCCGTTTCACCTTGGCTCTGATTGCAGCTAAGTGTAAGGAACACCGTCAGCGTCCGAAGCTGATCGAGGT
CAACGAGCAGTCCAATGAGGACCGCGGACCGTTCAACATTCGCTTCTGGGCTGTTAACCACTCCATCCCAGACTGCCTTG
GTCTTGCTATCAAGACTCCTGCTGGTTTGGTCATCCACACCGGTGACATCAAGCTGGATCAGACTCCTCCTGATGGACGC
CCAACTGACCTGCCTGCATTGTCCCGTTTCGGTGACGAGGGCGTGGACTTGATGCTGTGTGACTCCACCAACGCCACCAC
CCCTGGTGTTTCTGGATCTGAAGCTGATGTTGCTCCAACCCTGAAGCGTTTGGTCGGCGATGCTAAGCAGCGCGTCATTT
TGGCGTCGTTTGCTTCCAACGTGTACCGCGTTCAGGCAGCTGTGGATGCTGCCGTTGCGTCCAACCGTAAGGTTGCATTC
AACGGTCGTTCCATGATTCGCAACATGGAGATTGCGGAGAAGCTTGGTTACCTGAAGGCACCTCGCGGAACCATTATTTC
CATGGATGATGCTTCTCGTATGGCTCCTCACAAGGTCATGCTGATTACCACTGGTACTCAGGGTGAGCCTATGGCTGCGC
TGTCTCGCATGGCGCGTCGTGAGCACCGACAGATCACTGTCCGTGATGGAGACTTGATTATCCTTTCTTCCTCCCTGGTT
CCAGGTAACGAAGAAGCAGTGTTCGGTGTCATCAACATGCTGGCTCAGATCGGTGCAACTGTTGTTACCGGTCGCGACGC
CAAGGTGCACACCTCGGGCCACGGCTACTCCGGAGAGCTGTTGTTCTTGTACAACGCCGCTCGTCCGAAGAACGCTATGC
CTGTCCACGGCGAGTGGCGCCACCTGCGCGCCAACAAGGAACTGGCTATCTCCACTGGTGTTAACCGCGACAACGTTGTG
CTTGCACAAAACGGTGTTGTGGTTGATATGGTCAACGGTCGCGCACAGGTTGTTGGTCAGATTCCAGTTGGTAACCTTTA
CGTCGACGGTGTCACCATGGGTGATATTGACGCGGACATCCTTGCAGACCGTACCTCGCTTGGTGAGGGTGGCTTGATCT
CGATCACTGCTGTCATCGACAACCGCACTGGCCGTCTGTTGGAGCGCCCAACCGTTCAGACCAGCGGTTTCTCTGAGGAT
GCAAAGTCCATGATGGGTGAGGTCACTGAGCTGTCCGAAACCACCATGAATGATCTTGCAGCTGAAGGTGAAAACGATCC
TTACCGCATGGTTCAGCAGCTGCGCCGCAAGCTCTCTCGCTTCGTCGAGCAGAAGTGGAAGCGCCAGCCGGTCATCATGC
CAACCGTCATTCCGATGACTGCGGAAACCACGCACATCGGTGACGATGAGGTTCGCGCTTCACGCGAGTCCCTGTAA

Upstream 100 bases:

>100_bases
GCATCAACGTAGGAGATCCTCGACTTCCAATTATGGCTCCAAATGAGCAGGAACTTGAGGCTCTCCGAGAAGACATGAAA
AAAGCTGGAGTTCTATAAAT

Downstream 100 bases:

>100_bases
AAGCATTTCGCTTTTCGACGTCGCGAGCCCGCAGCACCCAACCTGGGTGCCGCGGGCTCAACGCGTTTCTACACATTGAT
CTAGTCTTGGTTGCATGAAT

Product: hydrolase of metallo-BETA-lactamase superfamily

Products: NA

Alternate protein names: RNase J

Number of amino acids: Translated: 718; Mature: 718

Protein sequence:

>718_residues
MNDSRNRGRKVTRKAGPPEAGQENHLDTPVFQAPDASSNQSAVKAETAGNDNRDAAQGAQGSQDSQGSQNAQGSQNRESG
NNNRNRSNNNRRGGRGRRGSGNANEGANNNSGNQNRQGGNRGNRGGGRRNVVKSMQGADLTQRLPEPPKAPANGLRIYAL
GGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVDLILPDFGPIEDHLHRVDALVVTHGHEDHIGAIPWLLKLRNDIP
ILASRFTLALIAAKCKEHRQRPKLIEVNEQSNEDRGPFNIRFWAVNHSIPDCLGLAIKTPAGLVIHTGDIKLDQTPPDGR
PTDLPALSRFGDEGVDLMLCDSTNATTPGVSGSEADVAPTLKRLVGDAKQRVILASFASNVYRVQAAVDAAVASNRKVAF
NGRSMIRNMEIAEKLGYLKAPRGTIISMDDASRMAPHKVMLITTGTQGEPMAALSRMARREHRQITVRDGDLIILSSSLV
PGNEEAVFGVINMLAQIGATVVTGRDAKVHTSGHGYSGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVNRDNVV
LAQNGVVVDMVNGRAQVVGQIPVGNLYVDGVTMGDIDADILADRTSLGEGGLISITAVIDNRTGRLLERPTVQTSGFSED
AKSMMGEVTELSETTMNDLAAEGENDPYRMVQQLRRKLSRFVEQKWKRQPVIMPTVIPMTAETTHIGDDEVRASRESL

Sequences:

>Translated_718_residues
MNDSRNRGRKVTRKAGPPEAGQENHLDTPVFQAPDASSNQSAVKAETAGNDNRDAAQGAQGSQDSQGSQNAQGSQNRESG
NNNRNRSNNNRRGGRGRRGSGNANEGANNNSGNQNRQGGNRGNRGGGRRNVVKSMQGADLTQRLPEPPKAPANGLRIYAL
GGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVDLILPDFGPIEDHLHRVDALVVTHGHEDHIGAIPWLLKLRNDIP
ILASRFTLALIAAKCKEHRQRPKLIEVNEQSNEDRGPFNIRFWAVNHSIPDCLGLAIKTPAGLVIHTGDIKLDQTPPDGR
PTDLPALSRFGDEGVDLMLCDSTNATTPGVSGSEADVAPTLKRLVGDAKQRVILASFASNVYRVQAAVDAAVASNRKVAF
NGRSMIRNMEIAEKLGYLKAPRGTIISMDDASRMAPHKVMLITTGTQGEPMAALSRMARREHRQITVRDGDLIILSSSLV
PGNEEAVFGVINMLAQIGATVVTGRDAKVHTSGHGYSGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVNRDNVV
LAQNGVVVDMVNGRAQVVGQIPVGNLYVDGVTMGDIDADILADRTSLGEGGLISITAVIDNRTGRLLERPTVQTSGFSED
AKSMMGEVTELSETTMNDLAAEGENDPYRMVQQLRRKLSRFVEQKWKRQPVIMPTVIPMTAETTHIGDDEVRASRESL
>Mature_718_residues
MNDSRNRGRKVTRKAGPPEAGQENHLDTPVFQAPDASSNQSAVKAETAGNDNRDAAQGAQGSQDSQGSQNAQGSQNRESG
NNNRNRSNNNRRGGRGRRGSGNANEGANNNSGNQNRQGGNRGNRGGGRRNVVKSMQGADLTQRLPEPPKAPANGLRIYAL
GGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVDLILPDFGPIEDHLHRVDALVVTHGHEDHIGAIPWLLKLRNDIP
ILASRFTLALIAAKCKEHRQRPKLIEVNEQSNEDRGPFNIRFWAVNHSIPDCLGLAIKTPAGLVIHTGDIKLDQTPPDGR
PTDLPALSRFGDEGVDLMLCDSTNATTPGVSGSEADVAPTLKRLVGDAKQRVILASFASNVYRVQAAVDAAVASNRKVAF
NGRSMIRNMEIAEKLGYLKAPRGTIISMDDASRMAPHKVMLITTGTQGEPMAALSRMARREHRQITVRDGDLIILSSSLV
PGNEEAVFGVINMLAQIGATVVTGRDAKVHTSGHGYSGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVNRDNVV
LAQNGVVVDMVNGRAQVVGQIPVGNLYVDGVTMGDIDADILADRTSLGEGGLISITAVIDNRTGRLLERPTVQTSGFSED
AKSMMGEVTELSETTMNDLAAEGENDPYRMVQQLRRKLSRFVEQKWKRQPVIMPTVIPMTAETTHIGDDEVRASRESL

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNJ_CORGL (P54122)

Other databases:

- EMBL:   X95649
- EMBL:   BA000036
- EMBL:   BX927153
- RefSeq:   NP_601176.1
- RefSeq:   YP_226212.1
- ProteinModelPortal:   P54122
- SMR:   P54122
- GeneID:   1019927
- GeneID:   3345114
- GenomeReviews:   BA000036_GR
- GenomeReviews:   BX927147_GR
- KEGG:   cgb:cg2160
- KEGG:   cgl:NCgl1895
- HOGENOM:   HBG497378
- OMA:   HIGAIPW
- ProtClustDB:   CLSK633568
- BioCyc:   CGLU196627:CG2160-MONOMER
- GO:   GO:0005737
- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR001587
- SMART:   SM00849

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL

EC number: NA

Molecular weight: Translated: 77603; Mature: 77603

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS01292 UPF0036

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSRNRGRKVTRKAGPPEAGQENHLDTPVFQAPDASSNQSAVKAETAGNDNRDAAQGAQ
CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCHHHCCCC
GSQDSQGSQNAQGSQNRESGNNNRNRSNNNRRGGRGRRGSGNANEGANNNSGNQNRQGGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGNRGGGRRNVVKSMQGADLTQRLPEPPKAPANGLRIYALGGISEIGRNMTVFEYNNRLL
CCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEECCHHHHCCCEEEEEECCEEE
IVDCGVLFPSSGEPGVDLILPDFGPIEDHLHRVDALVVTHGHEDHIGAIPWLLKLRNDIP
EEECCEEECCCCCCCCEEECCCCCCHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCCCC
ILASRFTLALIAAKCKEHRQRPKLIEVNEQSNEDRGPFNIRFWAVNHSIPDCLGLAIKTP
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCCCCHHHCEEEECC
AGLVIHTGDIKLDQTPPDGRPTDLPALSRFGDEGVDLMLCDSTNATTPGVSGSEADVAPT
CCEEEEECCEEECCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHH
LKRLVGDAKQRVILASFASNVYRVQAAVDAAVASNRKVAFNGRSMIRNMEIAEKLGYLKA
HHHHHHHHHHHEEHHHHHCCCEEEHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCCC
PRGTIISMDDASRMAPHKVMLITTGTQGEPMAALSRMARREHRQITVRDGDLIILSSSLV
CCCCEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCEEEEECCCC
PGNEEAVFGVINMLAQIGATVVTGRDAKVHTSGHGYSGELLFLYNAARPKNAMPVHGEWR
CCCCHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHH
HLRANKELAISTGVNRDNVVLAQNGVVVDMVNGRAQVVGQIPVGNLYVDGVTMGDIDADI
EECCCCEEEEECCCCCCCEEEEECCEEEEEECCCEEEEEECCCCCEEECCEEECCCCHHH
LADRTSLGEGGLISITAVIDNRTGRLLERPTVQTSGFSEDAKSMMGEVTELSETTMNDLA
HHCCCCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AEGENDPYRMVQQLRRKLSRFVEQKWKRQPVIMPTVIPMTAETTHIGDDEVRASRESL
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MNDSRNRGRKVTRKAGPPEAGQENHLDTPVFQAPDASSNQSAVKAETAGNDNRDAAQGAQ
CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCHHHCCCC
GSQDSQGSQNAQGSQNRESGNNNRNRSNNNRRGGRGRRGSGNANEGANNNSGNQNRQGGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGNRGGGRRNVVKSMQGADLTQRLPEPPKAPANGLRIYALGGISEIGRNMTVFEYNNRLL
CCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEECCHHHHCCCEEEEEECCEEE
IVDCGVLFPSSGEPGVDLILPDFGPIEDHLHRVDALVVTHGHEDHIGAIPWLLKLRNDIP
EEECCEEECCCCCCCCEEECCCCCCHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCCCC
ILASRFTLALIAAKCKEHRQRPKLIEVNEQSNEDRGPFNIRFWAVNHSIPDCLGLAIKTP
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCCCCHHHCEEEECC
AGLVIHTGDIKLDQTPPDGRPTDLPALSRFGDEGVDLMLCDSTNATTPGVSGSEADVAPT
CCEEEEECCEEECCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHH
LKRLVGDAKQRVILASFASNVYRVQAAVDAAVASNRKVAFNGRSMIRNMEIAEKLGYLKA
HHHHHHHHHHHEEHHHHHCCCEEEHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCCC
PRGTIISMDDASRMAPHKVMLITTGTQGEPMAALSRMARREHRQITVRDGDLIILSSSLV
CCCCEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCEEEEECCCC
PGNEEAVFGVINMLAQIGATVVTGRDAKVHTSGHGYSGELLFLYNAARPKNAMPVHGEWR
CCCCHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHH
HLRANKELAISTGVNRDNVVLAQNGVVVDMVNGRAQVVGQIPVGNLYVDGVTMGDIDADI
EECCCCEEEEECCCCCCCEEEEECCEEEEEECCCEEEEEECCCCCEEECCEEECCCCHHH
LADRTSLGEGGLISITAVIDNRTGRLLERPTVQTSGFSEDAKSMMGEVTELSETTMNDLA
HHCCCCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AEGENDPYRMVQQLRRKLSRFVEQKWKRQPVIMPTVIPMTAETTHIGDDEVRASRESL
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626