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The map label for this gene is yebC [C]

Identifier: 62390544

GI number: 62390544

Start: 1765459

End: 1766214

Strand: Reverse

Name: yebC [C]

Synonym: cg1872

Alternate gene names: 62390544

Gene position: 1766214-1765459 (Counterclockwise)

Preceding gene: 62390545

Following gene: 62390543

Centisome position: 53.8

GC content: 54.1

Gene sequence:

>756_bases
ATGTCTGGCCACTCAAAATGGGCGACTACCAAGCACAAGAAGGCTGCTAACGACGCCAAGCGAGGCAAGGAATTTGCCAA
GCTGATCAAGAACATCGAAGTTGCGGCACGTACAGGCGGTGGAGATCCGTCTGCGAACCCAACGCTTGATGACATGATCA
AGAAAGCCAAGAAGGCTTCTGTGCCGAACGATAACATCGAACGTGCACGCAAGCGTGGCTCCGGCGAAGAAGCTGGTGGC
GCTGACTGGATGAACATCATGTACGAGGGATACGGCCCCAACGGCGTTGCCATGCTTATCGAGTGTCTGACCGACAACCG
TAACCGCGCAGCTACCGAAGTTCGCACCGCAATGACCAAAAACGGTGGCAACTTGGGCGAGTCCGGTTCCGTGTCCTACA
TGTTCACCCGCACCGGTGTCGTCACCGTACAAAAGGGCGATCTTAGTGAAGATGACGTGCTCATGGCTGTTCTTGAAGCT
GGTGCTGAAGAAGTCAACGACAACGGCGATCTGTTCGAGGTTACCTGCGCACCAACTGACATTGTGGCTGTTCGCGACGC
ACTCGTGGAAGCTGGCATTGAAGTAGAAGATTCTGAATCAGACTTCCGGGCATCTGTTCAGGTCCCCCTGGACGCTGACG
GTGCACGCAAGATCTTCAAGCTTGTGGACGCGTTGGAAGATTCCGACGATGTGCAAAACGTCTACACCAACATCGACTTG
AGCGATGAGGTTTTGACAGAGCTGGAAAACGACTAG

Upstream 100 bases:

>100_bases
ACGGCGCACCACACATTTGGTGGTGTATTGAGCTATCTCTGGGCTGCGTGAGAAACCATTTTCCGGTGGATGATGGAAGC
TAGACGACGAAAGGGAGCAT

Downstream 100 bases:

>100_bases
TTCGTATTTTCCGCACTCCGTTCACCCCGCTATCCCTGCAGCTAAAACGCAGAGGATAGCGGGGTGATCGCAATTGTGTG
CTAAAAATGAGTATGGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSGHSKWATTKHKKAANDAKRGKEFAKLIKNIEVAARTGGGDPSANPTLDDMIKKAKKASVPNDNIERARKRGSGEEAGG
ADWMNIMYEGYGPNGVAMLIECLTDNRNRAATEVRTAMTKNGGNLGESGSVSYMFTRTGVVTVQKGDLSEDDVLMAVLEA
GAEEVNDNGDLFEVTCAPTDIVAVRDALVEAGIEVEDSESDFRASVQVPLDADGARKIFKLVDALEDSDDVQNVYTNIDL
SDEVLTELEND

Sequences:

>Translated_251_residues
MSGHSKWATTKHKKAANDAKRGKEFAKLIKNIEVAARTGGGDPSANPTLDDMIKKAKKASVPNDNIERARKRGSGEEAGG
ADWMNIMYEGYGPNGVAMLIECLTDNRNRAATEVRTAMTKNGGNLGESGSVSYMFTRTGVVTVQKGDLSEDDVLMAVLEA
GAEEVNDNGDLFEVTCAPTDIVAVRDALVEAGIEVEDSESDFRASVQVPLDADGARKIFKLVDALEDSDDVQNVYTNIDL
SDEVLTELEND
>Mature_250_residues
SGHSKWATTKHKKAANDAKRGKEFAKLIKNIEVAARTGGGDPSANPTLDDMIKKAKKASVPNDNIERARKRGSGEEAGGA
DWMNIMYEGYGPNGVAMLIECLTDNRNRAATEVRTAMTKNGGNLGESGSVSYMFTRTGVVTVQKGDLSEDDVLMAVLEAG
AEEVNDNGDLFEVTCAPTDIVAVRDALVEAGIEVEDSESDFRASVQVPLDADGARKIFKLVDALEDSDDVQNVYTNIDLS
DEVLTELEND

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=248, Percent_Identity=28.6290322580645, Blast_Score=114, Evalue=8e-26,
Organism=Escherichia coli, GI1788171, Length=250, Percent_Identity=49.2, Blast_Score=228, Evalue=4e-61,
Organism=Escherichia coli, GI1788294, Length=238, Percent_Identity=39.0756302521008, Blast_Score=139, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17556100, Length=247, Percent_Identity=27.1255060728745, Blast_Score=78, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=34.9809885931559, Blast_Score=122, Evalue=4e-29,
Organism=Drosophila melanogaster, GI24583305, Length=248, Percent_Identity=27.8225806451613, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26977; Mature: 26846

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWATTKHKKAANDAKRGKEFAKLIKNIEVAARTGGGDPSANPTLDDMIKKAKKAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHCC
VPNDNIERARKRGSGEEAGGADWMNIMYEGYGPNGVAMLIECLTDNRNRAATEVRTAMTK
CCCHHHHHHHHCCCCCCCCCCHHHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHC
NGGNLGESGSVSYMFTRTGVVTVQKGDLSEDDVLMAVLEAGAEEVNDNGDLFEVTCAPTD
CCCCCCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCH
IVAVRDALVEAGIEVEDSESDFRASVQVPLDADGARKIFKLVDALEDSDDVQNVYTNIDL
HHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCC
SDEVLTELEND
CHHHHHHHCCC
>Mature Secondary Structure 
SGHSKWATTKHKKAANDAKRGKEFAKLIKNIEVAARTGGGDPSANPTLDDMIKKAKKAS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHCC
VPNDNIERARKRGSGEEAGGADWMNIMYEGYGPNGVAMLIECLTDNRNRAATEVRTAMTK
CCCHHHHHHHHCCCCCCCCCCHHHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHC
NGGNLGESGSVSYMFTRTGVVTVQKGDLSEDDVLMAVLEAGAEEVNDNGDLFEVTCAPTD
CCCCCCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCH
IVAVRDALVEAGIEVEDSESDFRASVQVPLDADGARKIFKLVDALEDSDDVQNVYTNIDL
HHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCC
SDEVLTELEND
CHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]