| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is pepQ [H]
Identifier: 62390503
GI number: 62390503
Start: 1718246
End: 1719337
Strand: Reverse
Name: pepQ [H]
Synonym: cg1826
Alternate gene names: 62390503
Gene position: 1719337-1718246 (Counterclockwise)
Preceding gene: 62390504
Following gene: 62390502
Centisome position: 52.38
GC content: 58.52
Gene sequence:
>1092_bases ATGGCTTTGGCTGATACCCGATTTGCCACTCGTCGTCGCGCACTTGCCGCAAAACTGGCAGCTCAACGGATCGACTCAAT TTTGGTGACAAGCCCGATCCATGTTCGCTATCTCAGCGGATTCACCGGCTCCAACGGCGCACTGATCGTGAACAAAGATC TCTCCGCGCAGATCTGCACCGACGGTCGCTACACCACCCAGATCGCAGAAGAAGTCCCGGACATCGAGGCGCTGATTGAG CGTGCCTCGGCAACGACGCTGCTAGCGCAGGTCGAAGGGCCGCGTCGTATAGCAATCGAAGCCGCACAAACCACCCTGGA CCAGCTAGACAGCCTGCGTGAAGCAACCCAGGAAGACGTCGAGCTGATCCCCGTGTCAGGTGTTGTGGAATCCATTCGCC TGACCAAAGACAGCTTCGAACTCGACCGCCTCCGCGATGTCGCAGCGCTGGCTTCCCAAGCATTCGAAGATTTACTCGCA GCAGGAGAACTCGCCGAAGGCCGATCAGAGCGCCAAGTCGCCGCCGATCTGGAATACCGCATGCGCCTGTTGGGAGCAGA ACGCCCCAGCTTCGACACCATCGTGGCCTCTGGACCTAACTCCGCGAAACCACACCACGGCGCAGGCGACCGCATCCTCC AGCGCGGCGATCTAGTCACCATCGATTTCGGCGCACACGCACGCGGATTCAACTCCGATATGACCCGCACCCTCGTTATG GGCGAAGCAGGGGAGTTCGAAGCAGAAATCTACGACATCGTCCTGCGCTCCCAACTCGCTGGTGTTGAAGCAGCCTACTC AGGCGCCAACCTCTTCGACATCGACGCAGCATGCCGCAAAATCATCGAAGACGCAGGCTACGGCGAATACTTCGTGCACT CCACCGGCCACGGCATCGGACTTGAAGTCCACGAAGCCCCAAGCGCATCCAAAACCTCACAAGGAGTCCTAGAAACCGGC TCCACACTGACCATCGAACCCGGAATTTACGTCCCCGGAAAGGGCGGCGTACGCATCGAAGACACCCTGATTATTACCTC AGGAGCACCGGAAATCATCACCAAGGTGAGTAAGGACCTCATCGTGGTGTAA
Upstream 100 bases:
>100_bases TTTACAGAGTGCTTATGAGGCAATCAGCCACTAAGTGTTGAGTAATCTACTAGTTTGGACTAGAAGTTACCCACTTTCAG TGAATTTTTAAGGAGAGAAC
Downstream 100 bases:
>100_bases TCTAGGTGAGCTAATCGGTCTGCGCGTTTTTCAAGCACTTTGCGCAGACCCCCATCCACGTAATCCACGAGGGAGATCAC ATCCGTGGCAACTACCGCTG
Product: XAA-Pro aminopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MALADTRFATRRRALAAKLAAQRIDSILVTSPIHVRYLSGFTGSNGALIVNKDLSAQICTDGRYTTQIAEEVPDIEALIE RASATTLLAQVEGPRRIAIEAAQTTLDQLDSLREATQEDVELIPVSGVVESIRLTKDSFELDRLRDVAALASQAFEDLLA AGELAEGRSERQVAADLEYRMRLLGAERPSFDTIVASGPNSAKPHHGAGDRILQRGDLVTIDFGAHARGFNSDMTRTLVM GEAGEFEAEIYDIVLRSQLAGVEAAYSGANLFDIDAACRKIIEDAGYGEYFVHSTGHGIGLEVHEAPSASKTSQGVLETG STLTIEPGIYVPGKGGVRIEDTLIITSGAPEIITKVSKDLIVV
Sequences:
>Translated_363_residues MALADTRFATRRRALAAKLAAQRIDSILVTSPIHVRYLSGFTGSNGALIVNKDLSAQICTDGRYTTQIAEEVPDIEALIE RASATTLLAQVEGPRRIAIEAAQTTLDQLDSLREATQEDVELIPVSGVVESIRLTKDSFELDRLRDVAALASQAFEDLLA AGELAEGRSERQVAADLEYRMRLLGAERPSFDTIVASGPNSAKPHHGAGDRILQRGDLVTIDFGAHARGFNSDMTRTLVM GEAGEFEAEIYDIVLRSQLAGVEAAYSGANLFDIDAACRKIIEDAGYGEYFVHSTGHGIGLEVHEAPSASKTSQGVLETG STLTIEPGIYVPGKGGVRIEDTLIITSGAPEIITKVSKDLIVV >Mature_362_residues ALADTRFATRRRALAAKLAAQRIDSILVTSPIHVRYLSGFTGSNGALIVNKDLSAQICTDGRYTTQIAEEVPDIEALIER ASATTLLAQVEGPRRIAIEAAQTTLDQLDSLREATQEDVELIPVSGVVESIRLTKDSFELDRLRDVAALASQAFEDLLAA GELAEGRSERQVAADLEYRMRLLGAERPSFDTIVASGPNSAKPHHGAGDRILQRGDLVTIDFGAHARGFNSDMTRTLVMG EAGEFEAEIYDIVLRSQLAGVEAAYSGANLFDIDAACRKIIEDAGYGEYFVHSTGHGIGLEVHEAPSASKTSQGVLETGS TLTIEPGIYVPGKGGVRIEDTLIITSGAPEIITKVSKDLIVV
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI11559925, Length=311, Percent_Identity=26.6881028938907, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI264681563, Length=165, Percent_Identity=34.5454545454545, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI93141226, Length=169, Percent_Identity=36.094674556213, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI260593665, Length=292, Percent_Identity=26.027397260274, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI149589008, Length=292, Percent_Identity=26.3698630136986, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI264681565, Length=162, Percent_Identity=32.0987654320988, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI1788728, Length=359, Percent_Identity=36.4902506963788, Blast_Score=213, Evalue=1e-56, Organism=Escherichia coli, GI1789275, Length=278, Percent_Identity=27.6978417266187, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1786364, Length=183, Percent_Identity=29.5081967213115, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17509539, Length=259, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320922, Length=248, Percent_Identity=25.4032258064516, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6321118, Length=292, Percent_Identity=23.972602739726, Blast_Score=73, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6322999, Length=167, Percent_Identity=31.1377245508982, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI19920384, Length=295, Percent_Identity=28.135593220339, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI17137632, Length=377, Percent_Identity=24.9336870026525, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 38877; Mature: 38746
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00491 PROLINE_PEPTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALADTRFATRRRALAAKLAAQRIDSILVTSPIHVRYLSGFTGSNGALIVNKDLSAQICT CCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCEECCCCEEEEECCCCEEEEC DGRYTTQIAEEVPDIEALIERASATTLLAQVEGPRRIAIEAAQTTLDQLDSLREATQEDV CCCHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCC ELIPVSGVVESIRLTKDSFELDRLRDVAALASQAFEDLLAAGELAEGRSERQVAADLEYR EEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHH MRLLGAERPSFDTIVASGPNSAKPHHGAGDRILQRGDLVTIDFGAHARGFNSDMTRTLVM HHHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCEEEEE GEAGEFEAEIYDIVLRSQLAGVEAAYSGANLFDIDAACRKIIEDAGYGEYFVHSTGHGIG CCCCCHHHHHHHHHHHHHHCCCHHHCCCCCEEEHHHHHHHHHHHCCCCCEEEEECCCCCE LEVHEAPSASKTSQGVLETGSTLTIEPGIYVPGKGGVRIEDTLIITSGAPEIITKVSKDL EEEECCCCCCCCCCCHHHCCCEEEECCCEEECCCCCEEEEEEEEEECCCHHHHHHHHHCE IVV ECC >Mature Secondary Structure ALADTRFATRRRALAAKLAAQRIDSILVTSPIHVRYLSGFTGSNGALIVNKDLSAQICT CCCCCHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCEECCCCEEEEECCCCEEEEC DGRYTTQIAEEVPDIEALIERASATTLLAQVEGPRRIAIEAAQTTLDQLDSLREATQEDV CCCHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCC ELIPVSGVVESIRLTKDSFELDRLRDVAALASQAFEDLLAAGELAEGRSERQVAADLEYR EEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHH MRLLGAERPSFDTIVASGPNSAKPHHGAGDRILQRGDLVTIDFGAHARGFNSDMTRTLVM HHHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCEEEEE GEAGEFEAEIYDIVLRSQLAGVEAAYSGANLFDIDAACRKIIEDAGYGEYFVHSTGHGIG CCCCCHHHHHHHHHHHHHHCCCHHHCCCCCEEEHHHHHHHHHHHCCCCCEEEEECCCCCE LEVHEAPSASKTSQGVLETGSTLTIEPGIYVPGKGGVRIEDTLIITSGAPEIITKVSKDL EEEECCCCCCCCCCCHHHCCCEEEECCCEEECCCCCEEEEEEEEEECCCHHHHHHHHHCE IVV ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]