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The map label for this gene is nusB

Identifier: 62390501

GI number: 62390501

Start: 1716848

End: 1717531

Strand: Reverse

Name: nusB

Synonym: cg1824

Alternate gene names: 62390501

Gene position: 1717531-1716848 (Counterclockwise)

Preceding gene: 62390502

Following gene: 62390496

Centisome position: 52.32

GC content: 55.41

Gene sequence:

>684_bases
GTGAGCGAGCGTCGACAAGATTACAAGCGACACGGATCCCGCTACAAGGCGCGCATGCGTGCCGTAGACATCCTATTTGA
AGCGGAATCCCGCGATGTTGATCCCGTGGCCATCATCGATGACCGCCACAAGTTGGCGCGCGATACCAACCCCATCGTTG
CACCGGTAGCGGAATACACCGAAACCATCATCAATGGCGTTGCCGTTGAACTCGATACCCTCGATGTCTTCCTCGCGGAA
CACATCGCAGAAACCTGGACTCTCGGACGACTCCCATCCGTCGACCGCGCAATCCTGCGCGTCGCTTCCTGGGAAATGAT
CTACAACGCCGACGTTCCTGTCACCACCGCAATCGTTGAAGCCGTGGAAATTGCCTCCGAATACTCCGGAGACAAATCCA
GTGCCTACATCAACGCGACACTTGACGCCATGGCATCAAAGGTGGAGACCCTCCGCGAGCGCGCCGCCAACCCAGAAGCA
GTTCTGGCGGAAGCTTCCGAATCTCTCGATGATGCTCCGGTCGCGCCGTGGGATGACTCGGATGCTTTGGATGACTCGGA
TGAAGATTTTGAGGCTGTAGATGCTGCTGAGGTTTTTGAGGCTGAAGAGACTGTAGAGGTTTCCGAAGTCGCAGAAGACT
CTGAAGTTTCAAAGGTTTCAGAAGAAAAGGCTGACGAGAGCTAA

Upstream 100 bases:

>100_bases
CGACGGTTCCTACCTCTCCCGCGTTAACAACTAAGATTCTTAAAACCTTTAAGAATCAGCCAGAAACATTTTGATTGAAC
AGGAACAAAGAGAACAAAAC

Downstream 100 bases:

>100_bases
ATCTTTTCTGGCTAACACCAAGCGCCACCCACCCTGGAGAAATTTAGGGGTGGGTGGCGCTTCGTTGTGAGAGGGGACTA
GACAGGTGTGACAAGATTCT

Product: transcription antitermination protein NusB

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSERRQDYKRHGSRYKARMRAVDILFEAESRDVDPVAIIDDRHKLARDTNPIVAPVAEYTETIINGVAVELDTLDVFLAE
HIAETWTLGRLPSVDRAILRVASWEMIYNADVPVTTAIVEAVEIASEYSGDKSSAYINATLDAMASKVETLRERAANPEA
VLAEASESLDDAPVAPWDDSDALDDSDEDFEAVDAAEVFEAEETVEVSEVAEDSEVSKVSEEKADES

Sequences:

>Translated_227_residues
MSERRQDYKRHGSRYKARMRAVDILFEAESRDVDPVAIIDDRHKLARDTNPIVAPVAEYTETIINGVAVELDTLDVFLAE
HIAETWTLGRLPSVDRAILRVASWEMIYNADVPVTTAIVEAVEIASEYSGDKSSAYINATLDAMASKVETLRERAANPEA
VLAEASESLDDAPVAPWDDSDALDDSDEDFEAVDAAEVFEAEETVEVSEVAEDSEVSKVSEEKADES
>Mature_226_residues
SERRQDYKRHGSRYKARMRAVDILFEAESRDVDPVAIIDDRHKLARDTNPIVAPVAEYTETIINGVAVELDTLDVFLAEH
IAETWTLGRLPSVDRAILRVASWEMIYNADVPVTTAIVEAVEIASEYSGDKSSAYINATLDAMASKVETLRERAANPEAV
LAEASESLDDAPVAPWDDSDALDDSDEDFEAVDAAEVFEAEETVEVSEVAEDSEVSKVSEEKADES

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

None

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_CORGL (Q8NQ33)

Other databases:

- EMBL:   BA000036
- EMBL:   BX927152
- RefSeq:   NP_600832.1
- RefSeq:   YP_225903.1
- ProteinModelPortal:   Q8NQ33
- GeneID:   1019587
- GeneID:   3343483
- GenomeReviews:   BA000036_GR
- GenomeReviews:   BX927147_GR
- KEGG:   cgb:cg1824
- KEGG:   cgl:NCgl1556
- HOGENOM:   HBG734409
- OMA:   TEYVEIA
- ProtClustDB:   PRK00202
- BioCyc:   CGLU196627:CG1824-MONOMER
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 25010; Mature: 24879

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERRQDYKRHGSRYKARMRAVDILFEAESRDVDPVAIIDDRHKLARDTNPIVAPVAEYT
CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCHHHHCCCCCCCHHHHHHH
ETIINGVAVELDTLDVFLAEHIAETWTLGRLPSVDRAILRVASWEMIYNADVPVTTAIVE
HHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHH
AVEIASEYSGDKSSAYINATLDAMASKVETLRERAANPEAVLAEASESLDDAPVAPWDDS
HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
DALDDSDEDFEAVDAAEVFEAEETVEVSEVAEDSEVSKVSEEKADES
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SERRQDYKRHGSRYKARMRAVDILFEAESRDVDPVAIIDDRHKLARDTNPIVAPVAEYT
CHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCHHHHCCCCCCCHHHHHHH
ETIINGVAVELDTLDVFLAEHIAETWTLGRLPSVDRAILRVASWEMIYNADVPVTTAIVE
HHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHH
AVEIASEYSGDKSSAYINATLDAMASKVETLRERAANPEAVLAEASESLDDAPVAPWDDS
HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
DALDDSDEDFEAVDAAEVFEAEETVEVSEVAEDSEVSKVSEEKADES
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626