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The map label for this gene is nifU [H]

Identifier: 62390443

GI number: 62390443

Start: 1649115

End: 1649564

Strand: Reverse

Name: nifU [H]

Synonym: cg1760

Alternate gene names: 62390443

Gene position: 1649564-1649115 (Counterclockwise)

Preceding gene: 62390444

Following gene: 62390442

Centisome position: 50.25

GC content: 57.11

Gene sequence:

>450_bases
ATGAACCTTGAGCAGATGTACCAGGAGGTGATCCTGGACCACTACAAAAACCCACAGCACAAGGGCCTTCGGGATCCTTT
CGATGCTGAGGTTCACCACGTCAACCCTTCTTGTGGCGACGAATTGACTCTGCGCGTGAAGCTGTCTGAGGACGGCTCCA
CCGTGGAGGACGTCTCCTACGAAGCAGTTGGTTGCTCAATCAGCCAGGCCTCCACGTCCGTTATGGCCGAGGAGATCGTG
GGCCAACCCGTCGACAAGGCGCTGGAAAAGCTCACAGAATTTGAGAAGATGATCGTTTCCCGCGGTCAGTTTGTTGGCGA
TGAAGATCTCATCGGAGATGGCGTTGCTTTCTCCGGAGTCGCCAAGTACCCGGCACGCGTGAAGTGCGCGCTGCTTGGGT
GGAAGGCTTTCCAGGCGGCAACCGCTGACGCTGTTGCGCACGCACATTAG

Upstream 100 bases:

>100_bases
CGACAGCAAGAGCATCTTTCTATCTCTATAACACCTTCGAAGAAATCGACCGCCTCGCGGCAGCGATCGAGAAGGCCAAG
CAATTCTTTGGAGTTGAGTA

Downstream 100 bases:

>100_bases
CCCGCTGTATTAATTGGAGGAAACCATGAGCGAGCACACCGAGAACACGACAGAGGTTGAAGACCAGAACGCTTCCACCT
TTGAAGCACAAAGCTCTGAG

Product: NifU homologs involved in Fe-S cluster formation

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNLEQMYQEVILDHYKNPQHKGLRDPFDAEVHHVNPSCGDELTLRVKLSEDGSTVEDVSYEAVGCSISQASTSVMAEEIV
GQPVDKALEKLTEFEKMIVSRGQFVGDEDLIGDGVAFSGVAKYPARVKCALLGWKAFQAATADAVAHAH

Sequences:

>Translated_149_residues
MNLEQMYQEVILDHYKNPQHKGLRDPFDAEVHHVNPSCGDELTLRVKLSEDGSTVEDVSYEAVGCSISQASTSVMAEEIV
GQPVDKALEKLTEFEKMIVSRGQFVGDEDLIGDGVAFSGVAKYPARVKCALLGWKAFQAATADAVAHAH
>Mature_149_residues
MNLEQMYQEVILDHYKNPQHKGLRDPFDAEVHHVNPSCGDELTLRVKLSEDGSTVEDVSYEAVGCSISQASTSVMAEEIV
GQPVDKALEKLTEFEKMIVSRGQFVGDEDLIGDGVAFSGVAKYPARVKCALLGWKAFQAATADAVAHAH

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Escherichia coli, GI1788878, Length=140, Percent_Identity=27.8571428571429, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 16235; Mature: 16235

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLEQMYQEVILDHYKNPQHKGLRDPFDAEVHHVNPSCGDELTLRVKLSEDGSTVEDVSY
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCHHHCCH
EAVGCSISQASTSVMAEEIVGQPVDKALEKLTEFEKMIVSRGQFVGDEDLIGDGVAFSGV
HHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
AKYPARVKCALLGWKAFQAATADAVAHAH
HCCCCCEEHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLEQMYQEVILDHYKNPQHKGLRDPFDAEVHHVNPSCGDELTLRVKLSEDGSTVEDVSY
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCHHHCCH
EAVGCSISQASTSVMAEEIVGQPVDKALEKLTEFEKMIVSRGQFVGDEDLIGDGVAFSGV
HHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
AKYPARVKCALLGWKAFQAATADAVAHAH
HCCCCCEEHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]