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The map label for this gene is scpB [H]

Identifier: 62390309

GI number: 62390309

Start: 1504131

End: 1504646

Strand: Direct

Name: scpB [H]

Synonym: cg1614

Alternate gene names: 62390309

Gene position: 1504131-1504646 (Clockwise)

Preceding gene: 62390308

Following gene: 62390310

Centisome position: 45.82

GC content: 52.91

Gene sequence:

>516_bases
ATGGAATCAATCTTGTTGGTGGTCGATACCCCAGTTTCAGCACGCACGCTGGCTGGGGTGTTGGGCATTGACGTGCCTGC
AACAGAGGCAATTTTGAAGGAAATGGCCTTTGAGCTTTCTGAACGGGGCAGCGGCATTGATCTGCGGGAAACGGCAGAAG
GATGGCGCTATTACACCCGCCCGGAAAATGCGGACATCGTCGAGCAATTCCTCCTCGATGGAAACCAAACCAGACTGTCC
CGTGCAGCATTGGAAACACTCGCGGTGGTGGCATATCGGCAGCCGGTCACACGCTCCCAGATTTCAGCAGTGCGCGGAGT
AAATGTCGACGGCGTCATGAGAACCTTGCAGCTTCGAGGCCTAGTCAAAGAAGTCGATGTGGACGAATCAACGGGCGCAC
ACCGCTATGGCACAACGGAATTGCTGCTTGAGCTGTTGGGTATTGATTCTTTGGATAAATTACCAGATCTAGCACCGCTT
TTGCCGGATGTTGACTCCATTGATGAAGACTTCTAA

Upstream 100 bases:

>100_bases
AAAGCCGATTGCTTAACGCCCGCTATGATAACCACTCATGAATGATTTCGATCCAGCATTGATTTCCGCGATGAGCCTTA
TCCCTCAGACGAGGTCTCGG

Downstream 100 bases:

>100_bases
AGCATCAGTTAAAGCCCCGACTATTAAAATCTCCTAAAATAGGCTAGAATTCACGGGATTCAATTTCATACGTTTTCTCT
CAAGATTAAGGACACTTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MESILLVVDTPVSARTLAGVLGIDVPATEAILKEMAFELSERGSGIDLRETAEGWRYYTRPENADIVEQFLLDGNQTRLS
RAALETLAVVAYRQPVTRSQISAVRGVNVDGVMRTLQLRGLVKEVDVDESTGAHRYGTTELLLELLGIDSLDKLPDLAPL
LPDVDSIDEDF

Sequences:

>Translated_171_residues
MESILLVVDTPVSARTLAGVLGIDVPATEAILKEMAFELSERGSGIDLRETAEGWRYYTRPENADIVEQFLLDGNQTRLS
RAALETLAVVAYRQPVTRSQISAVRGVNVDGVMRTLQLRGLVKEVDVDESTGAHRYGTTELLLELLGIDSLDKLPDLAPL
LPDVDSIDEDF
>Mature_171_residues
MESILLVVDTPVSARTLAGVLGIDVPATEAILKEMAFELSERGSGIDLRETAEGWRYYTRPENADIVEQFLLDGNQTRLS
RAALETLAVVAYRQPVTRSQISAVRGVNVDGVMRTLQLRGLVKEVDVDESTGAHRYGTTELLLELLGIDSLDKLPDLAPL
LPDVDSIDEDF

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 18754; Mature: 18754

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESILLVVDTPVSARTLAGVLGIDVPATEAILKEMAFELSERGSGIDLRETAEGWRYYTR
CCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEECC
PENADIVEQFLLDGNQTRLSRAALETLAVVAYRQPVTRSQISAVRGVNVDGVMRTLQLRG
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHH
LVKEVDVDESTGAHRYGTTELLLELLGIDSLDKLPDLAPLLPDVDSIDEDF
HHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MESILLVVDTPVSARTLAGVLGIDVPATEAILKEMAFELSERGSGIDLRETAEGWRYYTR
CCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEECC
PENADIVEQFLLDGNQTRLSRAALETLAVVAYRQPVTRSQISAVRGVNVDGVMRTLQLRG
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHH
LVKEVDVDESTGAHRYGTTELLLELLGIDSLDKLPDLAPLLPDVDSIDEDF
HHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA