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The map label for this gene is yclN [H]

Identifier: 62389701

GI number: 62389701

Start: 854088

End: 855089

Strand: Direct

Name: yclN [H]

Synonym: cg0926

Alternate gene names: 62389701

Gene position: 854088-855089 (Clockwise)

Preceding gene: 62389700

Following gene: 62389702

Centisome position: 26.02

GC content: 54.09

Gene sequence:

>1002_bases
ATGGCAACACCAGCATCGGCTCCCACTTCCGAACCACGTCTCAAACGCACCAGAGCCAAGCTTTTTGATTGGAAGCTTCT
CATCGGCATCATTTTCGTCGCCGGCCTCGTGGTGCTTTCCCTCCTCACCGGCCAATACGACATTTTCGGTGGCGATGATG
GCCAACTGATGTTCGAGGCAGTTCGCATCCCGCGTACCGTTTCCCTCATTTTGTCCGGTGCAGCAATGGCGATGTGTGGC
TTAGTCATGCAGCTGTTGACCCAAAACAAATTCGTGGAACCCAGCACCACAGGAACAACCGAATGGGCAGGTCTTGGCCT
CCTCTTCGTGATTTACTTCGTGCCAGCCGCGACCGTTTTGGATCGCATGCTCGGTGCCGTGGTGTTTTCCTTCATCGGAA
CCATGGTGTTCTTCCTCTTTCTACGCCGAGTAACACTGCGTTCCTCATTGATCGTCCCGATTATCGGCATCATGCTCGGT
GCCGTGGTGTCATCGATCTCCAGCTTCTTCGCCTTGCAATTCGACATGCTCCAGCAATTGGGAACATGGTTTGCGGGTTC
CTTTAATACAGTGTTCCGCGGACAGTACGAAGTGCTGTGGATCGTTGTCATCGTCGTTATTGCAGTGTTCTTCTTCGCAG
ACCGGCTCACCGTAGCTGGCCTTGGCGAGGAAATCGCGACAAACGTGGGTCTCAATTACAACCGCATGGTCCTTATCGGA
ACTGGCCTCATCGCCATCGCAACAGGTGTGGTCACCGTCGTGGTTGGTAGCCTGCCATTCCTCGGACTCATCGTGCCCAA
CGTTGTGTCCATGTTCCGTGGCGATGACCTGCGCTCGAACCTGCCATGGGTATGCCTAACCGGCATCGCGATCGTAACCA
TTTGTGACTTGATCAGCCGAACCATCATCGCGCCTTTCGAAATTCCAGTTTCAGTAATCCTGGGCATCATCGGCGCAGTG
GTCTTCGTGATCATGATTGTGAGGCAACGTGGCCGTGGATAA

Upstream 100 bases:

>100_bases
ACCTCGTTTTGGCCGCAAGTTCTCGTTAGTTAAAAACTGTAGGAAACCAGGTTCCACACATGACACACAATCGGTTTAAC
AGGGAAGGGGATCGGCACTG

Downstream 100 bases:

>100_bases
AGATATTGAAAACCGCACCTCAGACCTTTCTCGATGGGAAACTATGGAGGAATCAGCAACGGTCGAGGGACGCACCGATG
TCGAACTAGCATCAGCGCCG

Product: ABC-type cobalamin/Fe3+-siderophores transport system, permease component

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MATPASAPTSEPRLKRTRAKLFDWKLLIGIIFVAGLVVLSLLTGQYDIFGGDDGQLMFEAVRIPRTVSLILSGAAMAMCG
LVMQLLTQNKFVEPSTTGTTEWAGLGLLFVIYFVPAATVLDRMLGAVVFSFIGTMVFFLFLRRVTLRSSLIVPIIGIMLG
AVVSSISSFFALQFDMLQQLGTWFAGSFNTVFRGQYEVLWIVVIVVIAVFFFADRLTVAGLGEEIATNVGLNYNRMVLIG
TGLIAIATGVVTVVVGSLPFLGLIVPNVVSMFRGDDLRSNLPWVCLTGIAIVTICDLISRTIIAPFEIPVSVILGIIGAV
VFVIMIVRQRGRG

Sequences:

>Translated_333_residues
MATPASAPTSEPRLKRTRAKLFDWKLLIGIIFVAGLVVLSLLTGQYDIFGGDDGQLMFEAVRIPRTVSLILSGAAMAMCG
LVMQLLTQNKFVEPSTTGTTEWAGLGLLFVIYFVPAATVLDRMLGAVVFSFIGTMVFFLFLRRVTLRSSLIVPIIGIMLG
AVVSSISSFFALQFDMLQQLGTWFAGSFNTVFRGQYEVLWIVVIVVIAVFFFADRLTVAGLGEEIATNVGLNYNRMVLIG
TGLIAIATGVVTVVVGSLPFLGLIVPNVVSMFRGDDLRSNLPWVCLTGIAIVTICDLISRTIIAPFEIPVSVILGIIGAV
VFVIMIVRQRGRG
>Mature_332_residues
ATPASAPTSEPRLKRTRAKLFDWKLLIGIIFVAGLVVLSLLTGQYDIFGGDDGQLMFEAVRIPRTVSLILSGAAMAMCGL
VMQLLTQNKFVEPSTTGTTEWAGLGLLFVIYFVPAATVLDRMLGAVVFSFIGTMVFFLFLRRVTLRSSLIVPIIGIMLGA
VVSSISSFFALQFDMLQQLGTWFAGSFNTVFRGQYEVLWIVVIVVIAVFFFADRLTVAGLGEEIATNVGLNYNRMVLIGT
GLIAIATGVVTVVVGSLPFLGLIVPNVVSMFRGDDLRSNLPWVCLTGIAIVTICDLISRTIIAPFEIPVSVILGIIGAVV
FVIMIVRQRGRG

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4606

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=298, Percent_Identity=28.1879194630872, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786805, Length=315, Percent_Identity=31.7460317460317, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790741, Length=289, Percent_Identity=26.9896193771626, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1790740, Length=296, Percent_Identity=25.6756756756757, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786347, Length=280, Percent_Identity=25.7142857142857, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 36010; Mature: 35879

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPASAPTSEPRLKRTRAKLFDWKLLIGIIFVAGLVVLSLLTGQYDIFGGDDGQLMFEA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHH
VRIPRTVSLILSGAAMAMCGLVMQLLTQNKFVEPSTTGTTEWAGLGLLFVIYFVPAATVL
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DRMLGAVVFSFIGTMVFFLFLRRVTLRSSLIVPIIGIMLGAVVSSISSFFALQFDMLQQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTWFAGSFNTVFRGQYEVLWIVVIVVIAVFFFADRLTVAGLGEEIATNVGLNYNRMVLIG
HHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEE
TGLIAIATGVVTVVVGSLPFLGLIVPNVVSMFRGDDLRSNLPWVCLTGIAIVTICDLISR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHH
TIIAPFEIPVSVILGIIGAVVFVIMIVRQRGRG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATPASAPTSEPRLKRTRAKLFDWKLLIGIIFVAGLVVLSLLTGQYDIFGGDDGQLMFEA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHH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HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]