Click here to switch to the map view.

The map label for this gene is yclQ [H]

Identifier: 62389700

GI number: 62389700

Start: 852821

End: 853837

Strand: Direct

Name: yclQ [H]

Synonym: cg0924

Alternate gene names: 62389700

Gene position: 852821-853837 (Clockwise)

Preceding gene: 62389696

Following gene: 62389701

Centisome position: 25.98

GC content: 56.83

Gene sequence:

>1017_bases
ATGGTGAAAAACCGATTCAAGCTAGTTTCAATCGCAACTGTTGCTGCCCTGGCGCTCGTTGGCTGCTCTTCCACCGACAG
CACCTCTTCCGAGTCTTCTTCCGCTGCAGAGTCAACCGCTGCAGCTAGCACCCTGACTATCGAAGACAACCACGGCACCG
AAGGGATCTCCCTGCCAATCGAGGGCGTCGCTGCGACCGACAACCGCGCATTCGAACTGCTTGATCGCTGGGGTGTAGAG
CTCGTTGCAGCTCCACTTCAGCTGGTTCCATTTACCGTTACGGGCTACACCGAAGAGGGCGGCGTCGCTAACCTTGGCTC
CCACCGCGAGCCAGACCTGGAAGCACTTGCTGCTGCACAGCCTTCCCTGATCATCAACGGCCAGCGCTTCGCTCAGTACT
ACGATGACATCATTGCCCTGAACCCTGACGCAACCGTTGTTGAGCTAGACCCACGCGATGGCGAGCCACTTGACCAGGAG
CTTATCCGCCAGGCTGAAACCCTCGGTGAGATCTTCGGCGAAGAAGAAGATGCTGCAAAGATCGTTGCTGATTTCGAGTC
CGCACTTGAGCGCGCTAAGACCGCATACGCAGCAATCTCCGACCAGACCGTCATGGCAGTTAACGTTTCCGGCGGAAACA
TTGGCTACATCGCTCCTTCCGTTGGACGCACCTACGGCCCAATCTTCGACCTGGTTGGACTCACCCCAGCACTCGAGGTT
GGCAACGCGTCCTCCGACCACGAGGGCGACGACATTAACGTCGAAGCAATCGCAGCTGCAAACCCAGACCTGATCCTGGT
CATGGACCGCGATGGTGGCACCAGCACCCGCAACGAAGCTGATTACGTTCCAGCAGAGCAGATCGTCTCCGACAATGAAG
CACTGGCAAACGTCAAGGCTGTCACCGACGGATACGTTTACTACGCACCTGCAGATACCTACACCAACGAAAACATCATC
ACCTACACCGAGATCCTCAACGGCATGGCAGATATGTTCGAGAAGGCAGCTCAGTAG

Upstream 100 bases:

>100_bases
CTGTGTTAACTTTCATCTTTAGGTAACCTAACCTCACTAAAACTCTGGGAATACTCTGGCAGTTTTGGTGGATTATTTTT
ATAGACTTTCAAAGGACGAC

Downstream 100 bases:

>100_bases
GGGATCGATCCCACACTGACCCCTAAGTAATGCGCAAAGTTTTATGCGTAAAAATTTCTTAGGTTAGGCTCTAATATGAA
AGGCTGTCTTGTAAAGAACA

Product: ABC-type cobalamin/Fe3+-siderophores transport sys

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MVKNRFKLVSIATVAALALVGCSSTDSTSSESSSAAESTAAASTLTIEDNHGTEGISLPIEGVAATDNRAFELLDRWGVE
LVAAPLQLVPFTVTGYTEEGGVANLGSHREPDLEALAAAQPSLIINGQRFAQYYDDIIALNPDATVVELDPRDGEPLDQE
LIRQAETLGEIFGEEEDAAKIVADFESALERAKTAYAAISDQTVMAVNVSGGNIGYIAPSVGRTYGPIFDLVGLTPALEV
GNASSDHEGDDINVEAIAAANPDLILVMDRDGGTSTRNEADYVPAEQIVSDNEALANVKAVTDGYVYYAPADTYTNENII
TYTEILNGMADMFEKAAQ

Sequences:

>Translated_338_residues
MVKNRFKLVSIATVAALALVGCSSTDSTSSESSSAAESTAAASTLTIEDNHGTEGISLPIEGVAATDNRAFELLDRWGVE
LVAAPLQLVPFTVTGYTEEGGVANLGSHREPDLEALAAAQPSLIINGQRFAQYYDDIIALNPDATVVELDPRDGEPLDQE
LIRQAETLGEIFGEEEDAAKIVADFESALERAKTAYAAISDQTVMAVNVSGGNIGYIAPSVGRTYGPIFDLVGLTPALEV
GNASSDHEGDDINVEAIAAANPDLILVMDRDGGTSTRNEADYVPAEQIVSDNEALANVKAVTDGYVYYAPADTYTNENII
TYTEILNGMADMFEKAAQ
>Mature_338_residues
MVKNRFKLVSIATVAALALVGCSSTDSTSSESSSAAESTAAASTLTIEDNHGTEGISLPIEGVAATDNRAFELLDRWGVE
LVAAPLQLVPFTVTGYTEEGGVANLGSHREPDLEALAAAQPSLIINGQRFAQYYDDIIALNPDATVVELDPRDGEPLDQE
LIRQAETLGEIFGEEEDAAKIVADFESALERAKTAYAAISDQTVMAVNVSGGNIGYIAPSVGRTYGPIFDLVGLTPALEV
GNASSDHEGDDINVEAIAAANPDLILVMDRDGGTSTRNEADYVPAEQIVSDNEALANVKAVTDGYVYYAPADTYTNENII
TYTEILNGMADMFEKAAQ

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4607

COG function: function code P; ABC-type enterochelin transport system, periplasmic component

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 35690; Mature: 35690

Theoretical pI: Translated: 3.76; Mature: 3.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKNRFKLVSIATVAALALVGCSSTDSTSSESSSAAESTAAASTLTIEDNHGTEGISLPI
CCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCEEEEEEECCCCCCCEEECC
EGVAATDNRAFELLDRWGVELVAAPLQLVPFTVTGYTEEGGVANLGSHREPDLEALAAAQ
CCEEECCCHHHHHHHHHCHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCC
PSLIINGQRFAQYYDDIIALNPDATVVELDPRDGEPLDQELIRQAETLGEIFGEEEDAAK
CCEEECHHHHHHHHCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
IVADFESALERAKTAYAAISDQTVMAVNVSGGNIGYIAPSVGRTYGPIFDLVGLTPALEV
HHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHCCCCCCCC
GNASSDHEGDDINVEAIAAANPDLILVMDRDGGTSTRNEADYVPAEQIVSDNEALANVKA
CCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCHHHHEEEE
VTDGYVYYAPADTYTNENIITYTEILNGMADMFEKAAQ
EECCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVKNRFKLVSIATVAALALVGCSSTDSTSSESSSAAESTAAASTLTIEDNHGTEGISLPI
CCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCEEEEEEECCCCCCCEEECC
EGVAATDNRAFELLDRWGVELVAAPLQLVPFTVTGYTEEGGVANLGSHREPDLEALAAAQ
CCEEECCCHHHHHHHHHCHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCC
PSLIINGQRFAQYYDDIIALNPDATVVELDPRDGEPLDQELIRQAETLGEIFGEEEDAAK
CCEEECHHHHHHHHCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
IVADFESALERAKTAYAAISDQTVMAVNVSGGNIGYIAPSVGRTYGPIFDLVGLTPALEV
HHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHCCCCCCCC
GNASSDHEGDDINVEAIAAANPDLILVMDRDGGTSTRNEADYVPAEQIVSDNEALANVKA
CCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCHHHHEEEE
VTDGYVYYAPADTYTNENIITYTEILNGMADMFEKAAQ
EECCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 10658653 [H]