| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is dtsR1 [H]
Identifier: 62389597
GI number: 62389597
Start: 730166
End: 731797
Strand: Reverse
Name: dtsR1 [H]
Synonym: cg0812
Alternate gene names: 62389597
Gene position: 731797-730166 (Counterclockwise)
Preceding gene: 62389606
Following gene: 62389596
Centisome position: 22.29
GC content: 58.58
Gene sequence:
>1632_bases ATGACCATTTCCTCACCTTTGATTGACGTCGCCAACCTTCCAGACATCAACACCACTGCCGGCAAGATCGCCGACCTTAA GGCTCGCCGCGCGGAAGCCCATTTCCCCATGGGTGAAAAGGCAGTAGAGAAGGTCCACGCTGCTGGACGCCTCACTGCCC GTGAGCGCTTGGATTACTTACTCGATGAGGGCTCCTTCATCGAGACCGATCAGCTGGCTCGCCACCGCACCACCGCTTTC GGCCTGGGCGCTAAGCGTCCTGCAACCGACGGCATCGTGACCGGCTGGGGCACCATTGATGGACGCGAAGTCTGCATCTT CTCGCAGGACGGCACCGTATTCGGTGGCGCGCTTGGTGAGGTGTACGGCGAAAAGATGATCAAGATCATGGAGCTGGCAA TCGACACCGGCCGCCCATTGATCGGTCTTTACGAAGGCGCTGGCGCTCGTATTCAGGACGGCGCTGTCTCCCTGGACTTC ATTTCCCAGACCTTCTACCAAAACATTCAGGCTTCTGGCGTTATCCCACAGATCTCCGTCATCATGGGCGCATGTGCAGG TGGCAACGCTTACGGCCCAGCTCTGACCGACTTCGTGGTCATGGTGGACAAGACCTCCAAGATGTTCGTTACCGGCCCAG ACGTGATCAAGACCGTCACCGGCGAGGAAATCACCCAGGAAGAGCTTGGCGGAGCAACCACCCACATGGTGACCGCTGGT AACTCCCACTACACCGCTGCGACCGATGAGGAAGCACTGGATTGGGTACAGGACCTGGTGTCCTTCCTCCCATCCAACAA TCGCTCCTACGCACCGATGGAAGACTTCGACGAGGAAGAAGGCGGCGTTGAAGAAAACATCACCGCTGACGATCTGAAGC TCGACGAGATCATCCCAGATTCCGCGACCGTTCCTTACGACGTCCGCGATGTCATCGAATGCCTCACCGACGATGGCGAA TACCTGGAAATCCAGGCAGACCGCGCAGAAAACGTTGTTATTGCATTCGGCCGCATCGAAGGCCAGTCCGTTGGCTTTGT TGCCAACCAGCCAACCCAGTTCGCTGGCTGCCTGGACATCGACTCCTCTGAGAAGGCAGCTCGCTTCGTCCGCACCTGCG ACGCGTTCAACATCCCAATCGTCATGCTTGTCGACGTCCCCGGCTTCCTCCCAGGCGCAGGCCAGGAGTACGGTGGCATT CTGCGTCGTGGCGCAAAGCTGCTCTACGCATACGGCGAAGCAACCGTTCCAAAGATCACCGTCACCATGCGTAAGGCTTA CGGCGGAGCGTACTGCGTGATGGGTTCCAAGGGCTTGGGCTCTGACATCAACCTTGCATGGCCAACCGCACAGATCGCCG TCATGGGCGCTGCTGGCGCAGTTGGATTCATCTACCGCAAGGAGCTCATGGCAGCTGATGCCAAGGGCCTCGATACCGTA GCTCTGGCTAAGTCCTTCGAGCGCGAGTATGAAGACCACATGCTCAACCCGTACCACGCTGCAGAACGTGGCCTGATCGA CGCCGTGATCCTGCCAAGCGAAACCCGCGGACAGATTTCCCGCAACCTTCGCCTGCTCAAGCACAAGAACGTCACTCGCC CTGCTCGCAAGCACGGCAACATGCCACTGTAA
Upstream 100 bases:
>100_bases TTTAAAAACTACCCGCACGCAGCACGAACCTGTTCAGTGATGTAAATCACCGCGGAAATATTGTGGACGTTACCCCCGCC TACCGCTACGATTTCAAAAC
Downstream 100 bases:
>100_bases ATCGGCGAATCCATAAAGGTTCAAAAGAATTCAATAAGAATTCAATAAGAATTCAATAAGGGTTCAATAAGGGCCGTCTT AAATGATTGGGTGTAAAGAA
Product: acetyl/propionyl-COA carboxylase subunit beta
Products: NA
Alternate protein names: PCCase; Propanoyl-CoA:carbon dioxide ligase [H]
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MTISSPLIDVANLPDINTTAGKIADLKARRAEAHFPMGEKAVEKVHAAGRLTARERLDYLLDEGSFIETDQLARHRTTAF GLGAKRPATDGIVTGWGTIDGREVCIFSQDGTVFGGALGEVYGEKMIKIMELAIDTGRPLIGLYEGAGARIQDGAVSLDF ISQTFYQNIQASGVIPQISVIMGACAGGNAYGPALTDFVVMVDKTSKMFVTGPDVIKTVTGEEITQEELGGATTHMVTAG NSHYTAATDEEALDWVQDLVSFLPSNNRSYAPMEDFDEEEGGVEENITADDLKLDEIIPDSATVPYDVRDVIECLTDDGE YLEIQADRAENVVIAFGRIEGQSVGFVANQPTQFAGCLDIDSSEKAARFVRTCDAFNIPIVMLVDVPGFLPGAGQEYGGI LRRGAKLLYAYGEATVPKITVTMRKAYGGAYCVMGSKGLGSDINLAWPTAQIAVMGAAGAVGFIYRKELMAADAKGLDTV ALAKSFEREYEDHMLNPYHAAERGLIDAVILPSETRGQISRNLRLLKHKNVTRPARKHGNMPL
Sequences:
>Translated_543_residues MTISSPLIDVANLPDINTTAGKIADLKARRAEAHFPMGEKAVEKVHAAGRLTARERLDYLLDEGSFIETDQLARHRTTAF GLGAKRPATDGIVTGWGTIDGREVCIFSQDGTVFGGALGEVYGEKMIKIMELAIDTGRPLIGLYEGAGARIQDGAVSLDF ISQTFYQNIQASGVIPQISVIMGACAGGNAYGPALTDFVVMVDKTSKMFVTGPDVIKTVTGEEITQEELGGATTHMVTAG NSHYTAATDEEALDWVQDLVSFLPSNNRSYAPMEDFDEEEGGVEENITADDLKLDEIIPDSATVPYDVRDVIECLTDDGE YLEIQADRAENVVIAFGRIEGQSVGFVANQPTQFAGCLDIDSSEKAARFVRTCDAFNIPIVMLVDVPGFLPGAGQEYGGI LRRGAKLLYAYGEATVPKITVTMRKAYGGAYCVMGSKGLGSDINLAWPTAQIAVMGAAGAVGFIYRKELMAADAKGLDTV ALAKSFEREYEDHMLNPYHAAERGLIDAVILPSETRGQISRNLRLLKHKNVTRPARKHGNMPL >Mature_542_residues TISSPLIDVANLPDINTTAGKIADLKARRAEAHFPMGEKAVEKVHAAGRLTARERLDYLLDEGSFIETDQLARHRTTAFG LGAKRPATDGIVTGWGTIDGREVCIFSQDGTVFGGALGEVYGEKMIKIMELAIDTGRPLIGLYEGAGARIQDGAVSLDFI SQTFYQNIQASGVIPQISVIMGACAGGNAYGPALTDFVVMVDKTSKMFVTGPDVIKTVTGEEITQEELGGATTHMVTAGN SHYTAATDEEALDWVQDLVSFLPSNNRSYAPMEDFDEEEGGVEENITADDLKLDEIIPDSATVPYDVRDVIECLTDDGEY LEIQADRAENVVIAFGRIEGQSVGFVANQPTQFAGCLDIDSSEKAARFVRTCDAFNIPIVMLVDVPGFLPGAGQEYGGIL RRGAKLLYAYGEATVPKITVTMRKAYGGAYCVMGSKGLGSDINLAWPTAQIAVMGAAGAVGFIYRKELMAADAKGLDTVA LAKSFEREYEDHMLNPYHAAERGLIDAVILPSETRGQISRNLRLLKHKNVTRPARKHGNMPL
Specific function: This Protein Is A Component Of The Acetyl Coenzyme A Carboxylase Complex; First, Biotin Carboxylase Catalyzes The Carboxylation Of The Carrier Protein And Then The Transcarboxylase Transfers The Carboxyl Group To Form Malonyl-CoA. [C]
COG id: COG4799
COG function: function code I; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 carboxyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI119943100, Length=522, Percent_Identity=50.1915708812261, Blast_Score=502, Evalue=1e-142, Organism=Homo sapiens, GI295821216, Length=542, Percent_Identity=48.3394833948339, Blast_Score=490, Evalue=1e-138, Organism=Homo sapiens, GI11545863, Length=489, Percent_Identity=33.9468302658487, Blast_Score=213, Evalue=4e-55, Organism=Escherichia coli, GI1788655, Length=189, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=9e-12, Organism=Caenorhabditis elegans, GI25147362, Length=514, Percent_Identity=50.5836575875486, Blast_Score=516, Evalue=1e-146, Organism=Caenorhabditis elegans, GI25147359, Length=514, Percent_Identity=50.5836575875486, Blast_Score=516, Evalue=1e-146, Organism=Caenorhabditis elegans, GI17552936, Length=504, Percent_Identity=33.531746031746, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24586065, Length=531, Percent_Identity=32.391713747646, Blast_Score=228, Evalue=6e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000022 - InterPro: IPR011763 - InterPro: IPR011762 [H]
Pfam domain/function: PF01039 Carboxyl_trans [H]
EC number: =6.4.1.3 [H]
Molecular weight: Translated: 58477; Mature: 58346
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS50980 COA_CT_NTER ; PS50989 COA_CT_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISSPLIDVANLPDINTTAGKIADLKARRAEAHFPMGEKAVEKVHAAGRLTARERLDYL CCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHH LDEGSFIETDQLARHRTTAFGLGAKRPATDGIVTGWGTIDGREVCIFSQDGTVFGGALGE HCCCCEECHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCEECHHHHH VYGEKMIKIMELAIDTGRPLIGLYEGAGARIQDGAVSLDFISQTFYQNIQASGVIPQISV HHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCEEHHHHHHHHHHCCCCCCCCCCHHH IMGACAGGNAYGPALTDFVVMVDKTSKMFVTGPDVIKTVTGEEITQEELGGATTHMVTAG HHHHCCCCCCCCCHHEEEEEEEECCCEEEEECCHHHHCCCCCHHHHHHHCCCEEEEEECC NSHYTAATDEEALDWVQDLVSFLPSNNRSYAPMEDFDEEEGGVEENITADDLKLDEIIPD CCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEHHHCCCC SATVPYDVRDVIECLTDDGEYLEIQADRAENVVIAFGRIEGQSVGFVANQPTQFAGCLDI CCCCCCCHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCEEEEECC DSSEKAARFVRTCDAFNIPIVMLVDVPGFLPGAGQEYGGILRRGAKLLYAYGEATVPKIT CCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCEEE VTMRKAYGGAYCVMGSKGLGSDINLAWPTAQIAVMGAAGAVGFIYRKELMAADAKGLDTV EEEECCCCCEEEEECCCCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHH ALAKSFEREYEDHMLNPYHAAERGLIDAVILPSETRGQISRNLRLLKHKNVTRPARKHGN HHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHCCC MPL CCC >Mature Secondary Structure TISSPLIDVANLPDINTTAGKIADLKARRAEAHFPMGEKAVEKVHAAGRLTARERLDYL CCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHH LDEGSFIETDQLARHRTTAFGLGAKRPATDGIVTGWGTIDGREVCIFSQDGTVFGGALGE HCCCCEECHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCEECHHHHH VYGEKMIKIMELAIDTGRPLIGLYEGAGARIQDGAVSLDFISQTFYQNIQASGVIPQISV HHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCEEHHHHHHHHHHCCCCCCCCCCHHH IMGACAGGNAYGPALTDFVVMVDKTSKMFVTGPDVIKTVTGEEITQEELGGATTHMVTAG HHHHCCCCCCCCCHHEEEEEEEECCCEEEEECCHHHHCCCCCHHHHHHHCCCEEEEEECC NSHYTAATDEEALDWVQDLVSFLPSNNRSYAPMEDFDEEEGGVEENITADDLKLDEIIPD CCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEHHHCCCC SATVPYDVRDVIECLTDDGEYLEIQADRAENVVIAFGRIEGQSVGFVANQPTQFAGCLDI CCCCCCCHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCEEEEECC DSSEKAARFVRTCDAFNIPIVMLVDVPGFLPGAGQEYGGILRRGAKLLYAYGEATVPKIT CCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCEEE VTMRKAYGGAYCVMGSKGLGSDINLAWPTAQIAVMGAAGAVGFIYRKELMAADAKGLDTV EEEECCCCCEEEEECCCCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHH ALAKSFEREYEDHMLNPYHAAERGLIDAVILPSETRGQISRNLRLLKHKNVTRPARKHGN HHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHCCC MPL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]