| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is blc [C]
Identifier: 62389519
GI number: 62389519
Start: 641690
End: 642340
Strand: Reverse
Name: blc [C]
Synonym: cg0726
Alternate gene names: 62389519
Gene position: 642340-641690 (Counterclockwise)
Preceding gene: 62389521
Following gene: 62389517
Centisome position: 19.57
GC content: 48.54
Gene sequence:
>651_bases ATGCGCATTTCAAGCAAACTTGTCACCACAGCACTACTCGCAGCCATTTCACTTTTCGGGATATCCACGGCACAAGCCCA AGACATTTTTGACGGCGGACGACTTGCAGGTGGCTCCTCGCAGGTATCTAACCTAAGTTCGGTTCCTGAAAACCTAGCGC TGCCCGAAATTGAAAATAGCATTGACCTAGAACGCTACAAAGGCAAGTGGTATCAAGTCGCAGCAATTCCCCAACCATTC TCTTTACAGTGCTCACATGACGTTACCGCTGATTACGGCGTGATCGACTCGGACACAATCTCTGTAACAAATAAGTGTGG CACTTTCTTTGGGCCTTCAGTTATTGAAGGCAGCGCTAAAGTAGTTTCCAATGCTTCATTAAAGGTTAGCTTCCCAGGTA TTCCATTTCAGAGTGAAGACAATCAAGCAAACTACCGCGTGACCTATATCGAAGATGATTATTCACTAGCAATCGTCGGC AGCCCAAGCCGGTCCTCAGGATTTATACTATCCCGCACGCCACAGCTCAGTAGTGACCAATGGTCTCACGTTCGGAACAT TACAGAGGACAGTGGGTGGTGGCCATGCGCATTCATTACAGTCCCAGCGACAGGTGGCTTAAACACCGCCACTCCGCTCT GCACACTTTAA
Upstream 100 bases:
>100_bases GCGATTTCTATGAAATTCTTCACCCATCCACAACTATCTACTATACTTTTAGAAGTAATAACTATTGAGTTAATATAAAC ATGAAGAAAGGATTTGCTTT
Downstream 100 bases:
>100_bases TTAACGTAGATGGTCATCTACTCCGTGTTGAGCCATGGTGCATTATTAAGGGATAACTCCTGTGCCATATCCTGAAGGAA TCGGATAACCACTTCACGCT
Product: lipoprotein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein; Outer Membrane Lipoprotein Blc; Lipocalin; Lipocalin-Like; Lipocalin-Related Protein And Bos/Can/Equ Allergen; Lipocalin-Like Lipoprotein; Lipocalin-Like Domain-Containing Protein; Lipocalin-Like Protein; Lipocalin Protein; Exported Protein
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRISSKLVTTALLAAISLFGISTAQAQDIFDGGRLAGGSSQVSNLSSVPENLALPEIENSIDLERYKGKWYQVAAIPQPF SLQCSHDVTADYGVIDSDTISVTNKCGTFFGPSVIEGSAKVVSNASLKVSFPGIPFQSEDNQANYRVTYIEDDYSLAIVG SPSRSSGFILSRTPQLSSDQWSHVRNITEDSGWWPCAFITVPATGGLNTATPLCTL
Sequences:
>Translated_216_residues MRISSKLVTTALLAAISLFGISTAQAQDIFDGGRLAGGSSQVSNLSSVPENLALPEIENSIDLERYKGKWYQVAAIPQPF SLQCSHDVTADYGVIDSDTISVTNKCGTFFGPSVIEGSAKVVSNASLKVSFPGIPFQSEDNQANYRVTYIEDDYSLAIVG SPSRSSGFILSRTPQLSSDQWSHVRNITEDSGWWPCAFITVPATGGLNTATPLCTL >Mature_216_residues MRISSKLVTTALLAAISLFGISTAQAQDIFDGGRLAGGSSQVSNLSSVPENLALPEIENSIDLERYKGKWYQVAAIPQPF SLQCSHDVTADYGVIDSDTISVTNKCGTFFGPSVIEGSAKVVSNASLKVSFPGIPFQSEDNQANYRVTYIEDDYSLAIVG SPSRSSGFILSRTPQLSSDQWSHVRNITEDSGWWPCAFITVPATGGLNTATPLCTL
Specific function: May Serve A Starvation Response Function In E. Coli. [C]
COG id: COG3040
COG function: function code M; Bacterial lipocalin
Gene ontology:
Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23106; Mature: 23106
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISSKLVTTALLAAISLFGISTAQAQDIFDGGRLAGGSSQVSNLSSVPENLALPEIENS CCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCCHHHHHHHHCCCCCCCCCCCCC IDLERYKGKWYQVAAIPQPFSLQCSHDVTADYGVIDSDTISVTNKCGTFFGPSVIEGSAK CCHHHHCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCHHCCCCCC VVSNASLKVSFPGIPFQSEDNQANYRVTYIEDDYSLAIVGSPSRSSGFILSRTPQLSSDQ EEECCEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCEEEECCCCCCCCH WSHVRNITEDSGWWPCAFITVPATGGLNTATPLCTL HHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCEECC >Mature Secondary Structure MRISSKLVTTALLAAISLFGISTAQAQDIFDGGRLAGGSSQVSNLSSVPENLALPEIENS CCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCCHHHHHHHHCCCCCCCCCCCCC IDLERYKGKWYQVAAIPQPFSLQCSHDVTADYGVIDSDTISVTNKCGTFFGPSVIEGSAK CCHHHHCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCHHCCCCCC VVSNASLKVSFPGIPFQSEDNQANYRVTYIEDDYSLAIVGSPSRSSGFILSRTPQLSSDQ EEECCEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCEEEECCCCCCCCH WSHVRNITEDSGWWPCAFITVPATGGLNTATPLCTL HHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA