| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
Click here to switch to the map view.
The map label for this gene is crtB2 [H]
Identifier: 62389515
GI number: 62389515
Start: 636636
End: 637550
Strand: Reverse
Name: crtB2 [H]
Synonym: cg0721
Alternate gene names: 62389515
Gene position: 637550-636636 (Counterclockwise)
Preceding gene: 62389516
Following gene: 62389514
Centisome position: 19.42
GC content: 45.25
Gene sequence:
>915_bases ATGACACACCAAAATTCGCCTCTCTTCCTTAAAAGTGCACTGAGACTTTACAATCGGGCCTCATTCAAGGCTTCACATAA AGTGATCGAAGAATATTCGACGAGCTTCAGTCTGTCTACGTGGTTGCTATCCCCACGCATACGAAATGACATACGAAATC TCTATGCAGTAGTTCGTATCGCCGATGAGATTGTCGACGGCACTGCACATGCCGCTGGTTGCTCAACTGCCAAAATCGAA GAGATTCTCGATGCCTATGAAATTGCGGTTCTTGCAGCACCACAACAACGCTTCAACACAGATCTTGTTTTACAAGCTTA TGGTGAAACTGCCCGACGCTGTGATTTCGAACAAGAGCATGTAATAGCCTTCTTTGCATCAATGCGTAAGGACCTCAAAG CTAATACACACGACCCAGATAGCTTCACAACGTATGTCTATGGCTCCGCGGAAGTTATAGGCCTGCTTTGTCTCAGCGTT TTCAACCAAGGTAGAACGATTAGCAAAAAACGGCTAGAGATTATGCAAAACGGAGCCCGCTCATTGGGAGCGGCATTCCA GAAAATTAACTTTCTCCGTGACTTGGCAGAAGATCAGCAAAATTTGGGCCGATTTTATTTCCCCAAAACCAGCCAAGGAA CTCTTACTAAAGAACAAAAAGAAGATCTCATCGCTGATATCCGTCAAGACCTAGCAATTGCCCACGATGCATTTCCAGAA ATACCAGTGCAGGCTCGCATCGGAGTGATCTCTGCTTATTTGCTCTTTCAAAAACTCACTGACCGAATTGAGGCTACTCC TACCGCCGATTTATTGCGGGAGCGAATCAGAGTTCCACTTCATATCAAACTCTCTACACTCGCTAGAGCCACGATGAAAG GTCTATCTATGAGCATCTACAGAAAGAATTCGTGA
Upstream 100 bases:
>100_bases TTCGCGCCTTCTTGGTGCCTGCTTTGTTCTACGACATCGGACCGAAAATCTGGTGGCCGTCAAAATTGTCCAATCAGAAA TACCAGAAGCAGCCTCAGCT
Downstream 100 bases:
>100_bases TGAAGGTCTCGACTAAAACTCCACGCTCCTCAGGTACCGCCGTAGTCATAGGCGCAGGTGTTGCTGGTTTAGCCACTTCT GCACTTTTAGCACGTGATGG
Product: phytoene synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTHQNSPLFLKSALRLYNRASFKASHKVIEEYSTSFSLSTWLLSPRIRNDIRNLYAVVRIADEIVDGTAHAAGCSTAKIE EILDAYEIAVLAAPQQRFNTDLVLQAYGETARRCDFEQEHVIAFFASMRKDLKANTHDPDSFTTYVYGSAEVIGLLCLSV FNQGRTISKKRLEIMQNGARSLGAAFQKINFLRDLAEDQQNLGRFYFPKTSQGTLTKEQKEDLIADIRQDLAIAHDAFPE IPVQARIGVISAYLLFQKLTDRIEATPTADLLRERIRVPLHIKLSTLARATMKGLSMSIYRKNS
Sequences:
>Translated_304_residues MTHQNSPLFLKSALRLYNRASFKASHKVIEEYSTSFSLSTWLLSPRIRNDIRNLYAVVRIADEIVDGTAHAAGCSTAKIE EILDAYEIAVLAAPQQRFNTDLVLQAYGETARRCDFEQEHVIAFFASMRKDLKANTHDPDSFTTYVYGSAEVIGLLCLSV FNQGRTISKKRLEIMQNGARSLGAAFQKINFLRDLAEDQQNLGRFYFPKTSQGTLTKEQKEDLIADIRQDLAIAHDAFPE IPVQARIGVISAYLLFQKLTDRIEATPTADLLRERIRVPLHIKLSTLARATMKGLSMSIYRKNS >Mature_303_residues THQNSPLFLKSALRLYNRASFKASHKVIEEYSTSFSLSTWLLSPRIRNDIRNLYAVVRIADEIVDGTAHAAGCSTAKIEE ILDAYEIAVLAAPQQRFNTDLVLQAYGETARRCDFEQEHVIAFFASMRKDLKANTHDPDSFTTYVYGSAEVIGLLCLSVF NQGRTISKKRLEIMQNGARSLGAAFQKINFLRDLAEDQQNLGRFYFPKTSQGTLTKEQKEDLIADIRQDLAIAHDAFPEI PVQARIGVISAYLLFQKLTDRIEATPTADLLRERIRVPLHIKLSTLARATMKGLSMSIYRKNS
Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]
COG id: COG1562
COG function: function code I; Phytoene/squalene synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phytoene/squalene synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002060 - InterPro: IPR019845 - InterPro: IPR008949 [H]
Pfam domain/function: PF00494 SQS_PSY [H]
EC number: =2.5.1.32 [H]
Molecular weight: Translated: 34308; Mature: 34177
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHQNSPLFLKSALRLYNRASFKASHKVIEEYSTSFSLSTWLLSPRIRNDIRNLYAVVRI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHH ADEIVDGTAHAAGCSTAKIEEILDAYEIAVLAAPQQRFNTDLVLQAYGETARRCDFEQEH HHHHHCCCCHHCCCCHHHHHHHHHHHHHHHEECCHHHCCCHHHHHHHCCHHHHCCCCHHH VIAFFASMRKDLKANTHDPDSFTTYVYGSAEVIGLLCLSVFNQGRTISKKRLEIMQNGAR HHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SLGAAFQKINFLRDLAEDQQNLGRFYFPKTSQGTLTKEQKEDLIADIRQDLAIAHDAFPE HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC IPVQARIGVISAYLLFQKLTDRIEATPTADLLRERIRVPLHIKLSTLARATMKGLSMSIY CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHEEEE RKNS ECCC >Mature Secondary Structure THQNSPLFLKSALRLYNRASFKASHKVIEEYSTSFSLSTWLLSPRIRNDIRNLYAVVRI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHH ADEIVDGTAHAAGCSTAKIEEILDAYEIAVLAAPQQRFNTDLVLQAYGETARRCDFEQEH HHHHHCCCCHHCCCCHHHHHHHHHHHHHHHEECCHHHCCCHHHHHHHCCHHHHCCCCHHH VIAFFASMRKDLKANTHDPDSFTTYVYGSAEVIGLLCLSVFNQGRTISKKRLEIMQNGAR HHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SLGAAFQKINFLRDLAEDQQNLGRFYFPKTSQGTLTKEQKEDLIADIRQDLAIAHDAFPE HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC IPVQARIGVISAYLLFQKLTDRIEATPTADLLRERIRVPLHIKLSTLARATMKGLSMSIY CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHEEEE RKNS ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8917308 [H]