Click here to switch to the map view.

The map label for this gene is hvnA

Identifier: 59714278

GI number: 59714278

Start: 1233751

End: 1234653

Strand: Reverse

Name: hvnA

Synonym: VF_A1095

Alternate gene names: NA

Gene position: 1234653-1233751 (Counterclockwise)

Preceding gene: 59714279

Following gene: 59714277

Centisome position: 92.81

GC content: 34.99

Gene sequence:

>903_bases
ATGGAATATATTATGAAATTTATAAAATTGATCAGTTGGTTTGTTCTACCCCTTAGCTTGTCTGTGTTGGCAAATGATGA
TGCTGCAGTAAGTCGTAGTAATAGCATTATTACACAACAACAAGGTGATTCATTGGTGCAGGCCTTAAGAAGTGATTACA
ATGATACTTCGCAAGATTGTCATGGTTCTCCTGCGTTTTTGTGTTCAGGAATAACCTTTCGAGGTAATAAGCCGGGTAAT
TACCACGTTTGGAATCCAAGTCCAAATGCCATAAAAAGTGGTGGAGTTTCCTTCTCTTACCTTCGTAAAGATTCTAAATA
TTCGAAATTAGCTTATGGTTATAAGAGTGGATATATCATTTATCAAATTTTTAGAGGCGATTTTGCTCCTGGAAAAATTG
ACTTAGATTATTTATGTTTCTTCCCTATTGATGCAGCGACAAATGAACGTGATAGTAATGGTTGTGGAAAAACACCAGGA
TATTCTGGAAGTCAGTCTTGTGATGCTCAAAATATTTATACAGCAGGTGCTTGGAGCAATCATTATTATCAAGGTAATGC
TAACCACCATCACCAATGTTCATTTAATCTAAGAGAAGGAGCTTCGTCTGATACAACGAAAAATTTTGCTGAAGGTATCA
AATCAATGGCTAAGATTTCTAGTGAATCGTTTGGTACTCAAAATGAGTTAAGACTTGGCCTTTGGGATCAAAATATTGGT
AATGTTTTACCTATTCAAGCATTCTTCTATGTATATGGCTCTGGGTTAGGTGAAGCTCAAAGTTATCAGAAAGATTTCTA
CAATACGACAGGTATTGCTATTCCGGTAATTAAAATGTCGCTACCTGAATATTCAAACCAAGATGTACAATTTACATTTA
ATATGAATGAACAAGCAATTTAA

Upstream 100 bases:

>100_bases
TGATTTGAGTAATGGTAATAGCGATGACGGTTATGACACGTACACCGATTACGTAACGTGTATTGATCGCAGTGATGTGT
ATTAATTAAAACTTAAATAT

Downstream 100 bases:

>100_bases
TATTTCACTTTAAAGTTATTGATTATAAAGATAAAACCGTCATTGTTATGGCGGTTTTTTTGTGTTTGTATGTGAACGAA
ATATGGATGTTTATATAACA

Product: halovibrin HvnA

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MEYIMKFIKLISWFVLPLSLSVLANDDAAVSRSNSIITQQQGDSLVQALRSDYNDTSQDCHGSPAFLCSGITFRGNKPGN
YHVWNPSPNAIKSGGVSFSYLRKDSKYSKLAYGYKSGYIIYQIFRGDFAPGKIDLDYLCFFPIDAATNERDSNGCGKTPG
YSGSQSCDAQNIYTAGAWSNHYYQGNANHHHQCSFNLREGASSDTTKNFAEGIKSMAKISSESFGTQNELRLGLWDQNIG
NVLPIQAFFYVYGSGLGEAQSYQKDFYNTTGIAIPVIKMSLPEYSNQDVQFTFNMNEQAI

Sequences:

>Translated_300_residues
MEYIMKFIKLISWFVLPLSLSVLANDDAAVSRSNSIITQQQGDSLVQALRSDYNDTSQDCHGSPAFLCSGITFRGNKPGN
YHVWNPSPNAIKSGGVSFSYLRKDSKYSKLAYGYKSGYIIYQIFRGDFAPGKIDLDYLCFFPIDAATNERDSNGCGKTPG
YSGSQSCDAQNIYTAGAWSNHYYQGNANHHHQCSFNLREGASSDTTKNFAEGIKSMAKISSESFGTQNELRLGLWDQNIG
NVLPIQAFFYVYGSGLGEAQSYQKDFYNTTGIAIPVIKMSLPEYSNQDVQFTFNMNEQAI
>Mature_300_residues
MEYIMKFIKLISWFVLPLSLSVLANDDAAVSRSNSIITQQQGDSLVQALRSDYNDTSQDCHGSPAFLCSGITFRGNKPGN
YHVWNPSPNAIKSGGVSFSYLRKDSKYSKLAYGYKSGYIIYQIFRGDFAPGKIDLDYLCFFPIDAATNERDSNGCGKTPG
YSGSQSCDAQNIYTAGAWSNHYYQGNANHHHQCSFNLREGASSDTTKNFAEGIKSMAKISSESFGTQNELRLGLWDQNIG
NVLPIQAFFYVYGSGLGEAQSYQKDFYNTTGIAIPVIKMSLPEYSNQDVQFTFNMNEQAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33306; Mature: 33306

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYIMKFIKLISWFVLPLSLSVLANDDAAVSRSNSIITQQQGDSLVQALRSDYNDTSQDC
CHHHHHHHHHHHHHHHHHHHEEEECCCHHHCCCCCEEECCCCHHHHHHHHHCCCCCCHHC
HGSPAFLCSGITFRGNKPGNYHVWNPSPNAIKSGGVSFSYLRKDSKYSKLAYGYKSGYII
CCCCCEEEECEEEECCCCCCEEEECCCCCHHHCCCCEEEHHHCCCCHHHHHHCCCCCEEE
YQIFRGDFAPGKIDLDYLCFFPIDAATNERDSNGCGKTPGYSGSQSCDAQNIYTAGAWSN
EEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
HYYQGNANHHHQCSFNLREGASSDTTKNFAEGIKSMAKISSESFGTQNELRLGLWDQNIG
CEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
NVLPIQAFFYVYGSGLGEAQSYQKDFYNTTGIAIPVIKMSLPEYSNQDVQFTFNMNEQAI
CCCHHHHEEHHHCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MEYIMKFIKLISWFVLPLSLSVLANDDAAVSRSNSIITQQQGDSLVQALRSDYNDTSQDC
CHHHHHHHHHHHHHHHHHHHEEEECCCHHHCCCCCEEECCCCHHHHHHHHHCCCCCCHHC
HGSPAFLCSGITFRGNKPGNYHVWNPSPNAIKSGGVSFSYLRKDSKYSKLAYGYKSGYII
CCCCCEEEECEEEECCCCCCEEEECCCCCHHHCCCCEEEHHHCCCCHHHHHHCCCCCEEE
YQIFRGDFAPGKIDLDYLCFFPIDAATNERDSNGCGKTPGYSGSQSCDAQNIYTAGAWSN
EEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
HYYQGNANHHHQCSFNLREGASSDTTKNFAEGIKSMAKISSESFGTQNELRLGLWDQNIG
CEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
NVLPIQAFFYVYGSGLGEAQSYQKDFYNTTGIAIPVIKMSLPEYSNQDVQFTFNMNEQAI
CCCHHHHEEHHHCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA