| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59714166
Identifier: 59714166
GI number: 59714166
Start: 1102865
End: 1103413
Strand: Reverse
Name: 59714166
Synonym: VF_A0983
Alternate gene names: NA
Gene position: 1103413-1102865 (Counterclockwise)
Preceding gene: 59714169
Following gene: 59714165
Centisome position: 82.94
GC content: 28.42
Gene sequence:
>549_bases ATGAATATTTTTGGAAGAAATAATAAACCGATTTCACCACAGTTTTTAGATGGAATTATAAGAGGTTTAAATTATGTAGC TAATAGCGCAAGTGATATGAATTTATCTCACTATCAAAACTTAATTTCACAATATTTTGATTATGATGAAGAAAAATGCA CATATAAACCAAAAACAATCAAGTTAATGCTAGATGATGAGCATGAAATAACTATGCCTTTAATCGCAGTTACAGATGCG AAAGGCCTTTATCTTGATGAATTAGGTGTTGATTTTTCAGTTCGAGTCACTGGTGTTGATACTGATAATTTACAGCAAGA TTTTAAAGATAAATATCCAAAATTAATTGTAGATATTTCACCAAGTCATCGAAATAAAGGTGAAATAAATAAGGATTTTA TTGATTTTAAAGTGAAATTTAAATCAAGTGACGCTCCTGAGTGTGTGATGAAAATTATAGATAAATTTAATACTCAAATT ATACCTAAAAAAATTGTTTCAGATTCGTCATCAGAGATGACACCTCCCGAAGTTAATACTTCACATTAA
Upstream 100 bases:
>100_bases TACTTTTTTAATTTTTTTAGTATTTGGAATTATTTCCATATTATTTTATAAAATTATATGGTTTATTATTTTCTCATCAT TTAATAATAAAGGTTATGTT
Downstream 100 bases:
>100_bases ATAAAGGAAATTAATATGGCTTTAGAAAGTATGCAAAATCAATTTTCAGGTTTACCAATGGAAAGTTTAATTGGTTCACC TTTAAAAGCAGCATGTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNIFGRNNKPISPQFLDGIIRGLNYVANSASDMNLSHYQNLISQYFDYDEEKCTYKPKTIKLMLDDEHEITMPLIAVTDA KGLYLDELGVDFSVRVTGVDTDNLQQDFKDKYPKLIVDISPSHRNKGEINKDFIDFKVKFKSSDAPECVMKIIDKFNTQI IPKKIVSDSSSEMTPPEVNTSH
Sequences:
>Translated_182_residues MNIFGRNNKPISPQFLDGIIRGLNYVANSASDMNLSHYQNLISQYFDYDEEKCTYKPKTIKLMLDDEHEITMPLIAVTDA KGLYLDELGVDFSVRVTGVDTDNLQQDFKDKYPKLIVDISPSHRNKGEINKDFIDFKVKFKSSDAPECVMKIIDKFNTQI IPKKIVSDSSSEMTPPEVNTSH >Mature_182_residues MNIFGRNNKPISPQFLDGIIRGLNYVANSASDMNLSHYQNLISQYFDYDEEKCTYKPKTIKLMLDDEHEITMPLIAVTDA KGLYLDELGVDFSVRVTGVDTDNLQQDFKDKYPKLIVDISPSHRNKGEINKDFIDFKVKFKSSDAPECVMKIIDKFNTQI IPKKIVSDSSSEMTPPEVNTSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20760; Mature: 20760
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIFGRNNKPISPQFLDGIIRGLNYVANSASDMNLSHYQNLISQYFDYDEEKCTYKPKTI CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEECCCEE KLMLDDEHEITMPLIAVTDAKGLYLDELGVDFSVRVTGVDTDNLQQDFKDKYPKLIVDIS EEEECCCCCEEEEEEEEECCCCEEEHHCCCCEEEEEEECCCHHHHHHHHHCCCEEEEECC PSHRNKGEINKDFIDFKVKFKSSDAPECVMKIIDKFNTQIIPKKIVSDSSSEMTPPEVNT CCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC SH CC >Mature Secondary Structure MNIFGRNNKPISPQFLDGIIRGLNYVANSASDMNLSHYQNLISQYFDYDEEKCTYKPKTI CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEECCCEE KLMLDDEHEITMPLIAVTDAKGLYLDELGVDFSVRVTGVDTDNLQQDFKDKYPKLIVDIS EEEECCCCCEEEEEEEEECCCCEEEHHCCCCEEEEEEECCCHHHHHHHHHCCCEEEEECC PSHRNKGEINKDFIDFKVKFKSSDAPECVMKIIDKFNTQIIPKKIVSDSSSEMTPPEVNT CCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC SH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA