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The map label for this gene is ynfM [H]

Identifier: 59714160

GI number: 59714160

Start: 1097990

End: 1099198

Strand: Reverse

Name: ynfM [H]

Synonym: VF_A0977

Alternate gene names: 59714160

Gene position: 1099198-1097990 (Counterclockwise)

Preceding gene: 59714164

Following gene: 59714156

Centisome position: 82.63

GC content: 38.38

Gene sequence:

>1209_bases
ATGGCGATCACTAAGATGATTGAGTTTAAAAGTAAGGCCTATTATCAAGTAAGTGCAGCTCTTGCATTTGGGTCTTTTAT
TGTTTTTTGTAATTTATATTTGTTTCAGCCAATGCTTCCTGTTTTGGCAGAACATTTTTCGGTATCTGCAACTAAAATCA
ATTGGTTGTTAGCTGCTGGAACATTCACCTTAGCTTTTATGTTGCTACCTTGGGCTATCGCTTCTGATTTTATTGGTCGT
CGTAATGTGATGTTATTGAGTTTATTTCTCTTGCCAGTCATTGGTTTATTGTCTTTATTAACAAGTCATCTAGCTATATT
AATCTTAAGTCGTGCCGTTATGGGAATGGCTTTAGCCGGATTTACGGCTGTTGCCGTTGCTTATATGGCTGAAGCGTTTA
CAGCAAAAGCCTTCAGTTATGCGATAGGGGCTTATATTAGCGCCAACTCACTAGGCGGGATTTCAGGACGGTTGTTTGGC
GGAATTATAACCGACTATTTTGATTGGCAAACAGCGGTGATATTTATGGCTGCCCTGAGTTTGATTGGTGCCATGCTTGT
CGCTATTTTATTGCCTAAAGAGGGTGATAAAGCTTTAAATAAAGCTGAATTATCTTCTTATGTCAGAGTTGTTGTGCAGC
ATTTACGAAATCGACGTCTCTTTCTTGCTATGCTTATTGGAGGAGTCAACTTCGCTTTATTTGTAAACCTTTATTCTGTT
ATTGGCTTTCGACTAATTGCTGAGCCTTACTCTTTACCTTTAAGCGTCACTTCTATGATTTTTCTTTGTTATCTATCCGG
CACTGTAAGCTCAAGGTTAGTTGGACTATGGAGTCAACGCTTTAGTTCTGTATTTGGTATGTTTGTAGGGACACTCATTA
GTTTAATTGGAATGGTTATTACGACAAATGACTCTTTAATTACAATGGTCATTGGTTTAAATGTATTAAGTTTTGGTGCG
TTTTTTACTCATTCCTTGGCTTATGGTTGGGTGAGTCAGCAAGCAGAAACGGCTAAATCTACAGCAACAGCATTATACTT
AGTGCATTATTATGTCAGTGGTAGCTTAGGTGGTTTTTATCTAATGTATTGTTGGCAGCATGGTGGGTGGAATGCGGTGA
TGATTGGAGCCGGTTTTCTATATATGATTATTTTTGCTTTATGTTGGCGTTTAAATCATTACGCCCAAGCTAAAGTGGCT
TGGGCGTAA

Upstream 100 bases:

>100_bases
AGTCGAGTGTCCATGTGATAACCAAATGCTATTGAAATGATAATTATAATATATTTTCACTATTCAAATGGAGTTGCTAC
AGTTTTAGTACAGTTTTCTA

Downstream 100 bases:

>100_bases
TGTAAGTCAGTAATAAAAGCCTAAGTCATAGCTTTTCAAATACTTTAAATCCATTCTTTCCTGAGCGTTTGATGTCATAC
ATTGCCGCATCGGCATTATG

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MAITKMIEFKSKAYYQVSAALAFGSFIVFCNLYLFQPMLPVLAEHFSVSATKINWLLAAGTFTLAFMLLPWAIASDFIGR
RNVMLLSLFLLPVIGLLSLLTSHLAILILSRAVMGMALAGFTAVAVAYMAEAFTAKAFSYAIGAYISANSLGGISGRLFG
GIITDYFDWQTAVIFMAALSLIGAMLVAILLPKEGDKALNKAELSSYVRVVVQHLRNRRLFLAMLIGGVNFALFVNLYSV
IGFRLIAEPYSLPLSVTSMIFLCYLSGTVSSRLVGLWSQRFSSVFGMFVGTLISLIGMVITTNDSLITMVIGLNVLSFGA
FFTHSLAYGWVSQQAETAKSTATALYLVHYYVSGSLGGFYLMYCWQHGGWNAVMIGAGFLYMIIFALCWRLNHYAQAKVA
WA

Sequences:

>Translated_402_residues
MAITKMIEFKSKAYYQVSAALAFGSFIVFCNLYLFQPMLPVLAEHFSVSATKINWLLAAGTFTLAFMLLPWAIASDFIGR
RNVMLLSLFLLPVIGLLSLLTSHLAILILSRAVMGMALAGFTAVAVAYMAEAFTAKAFSYAIGAYISANSLGGISGRLFG
GIITDYFDWQTAVIFMAALSLIGAMLVAILLPKEGDKALNKAELSSYVRVVVQHLRNRRLFLAMLIGGVNFALFVNLYSV
IGFRLIAEPYSLPLSVTSMIFLCYLSGTVSSRLVGLWSQRFSSVFGMFVGTLISLIGMVITTNDSLITMVIGLNVLSFGA
FFTHSLAYGWVSQQAETAKSTATALYLVHYYVSGSLGGFYLMYCWQHGGWNAVMIGAGFLYMIIFALCWRLNHYAQAKVA
WA
>Mature_401_residues
AITKMIEFKSKAYYQVSAALAFGSFIVFCNLYLFQPMLPVLAEHFSVSATKINWLLAAGTFTLAFMLLPWAIASDFIGRR
NVMLLSLFLLPVIGLLSLLTSHLAILILSRAVMGMALAGFTAVAVAYMAEAFTAKAFSYAIGAYISANSLGGISGRLFGG
IITDYFDWQTAVIFMAALSLIGAMLVAILLPKEGDKALNKAELSSYVRVVVQHLRNRRLFLAMLIGGVNFALFVNLYSVI
GFRLIAEPYSLPLSVTSMIFLCYLSGTVSSRLVGLWSQRFSSVFGMFVGTLISLIGMVITTNDSLITMVIGLNVLSFGAF
FTHSLAYGWVSQQAETAKSTATALYLVHYYVSGSLGGFYLMYCWQHGGWNAVMIGAGFLYMIIFALCWRLNHYAQAKVAW
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=392, Percent_Identity=33.9285714285714, Blast_Score=183, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43977; Mature: 43846

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCHHHCCEEECC
>Mature Secondary Structure 
AITKMIEFKSKAYYQVSAALAFGSFIVFCNLYLFQPMLPVLAEHFSVSATKINWLLAAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
TFTLAFMLLPWAIASDFIGRRNVMLLSLFLLPVIGLLSLLTSHLAILILSRAVMGMALAG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTAVAVAYMAEAFTAKAFSYAIGAYISANSLGGISGRLFGGIITDYFDWQTAVIFMAALS
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIGAMLVAILLPKEGDKALNKAELSSYVRVVVQHLRNRRLFLAMLIGGVNFALFVNLYSV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IGFRLIAEPYSLPLSVTSMIFLCYLSGTVSSRLVGLWSQRFSSVFGMFVGTLISLIGMVI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTNDSLITMVIGLNVLSFGAFFTHSLAYGWVSQQAETAKSTATALYLVHYYVSGSLGGFY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LMYCWQHGGWNAVMIGAGFLYMIIFALCWRLNHYAQAKVAWA
EEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]