| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59714156
Identifier: 59714156
GI number: 59714156
Start: 1094446
End: 1095363
Strand: Reverse
Name: 59714156
Synonym: VF_A0973
Alternate gene names: NA
Gene position: 1095363-1094446 (Counterclockwise)
Preceding gene: 59714160
Following gene: 59714155
Centisome position: 82.34
GC content: 37.69
Gene sequence:
>918_bases ATGCGTTGGCTTGCGTTAAACCCATTTATTATTGTTTTTTCTCTTTTGCTTTCTTGGTCAACGATGGCCGAAACTACCTA TCCATTACATGTTGTTGATGGGTTAGGTAATACCGTTATTTTAGAGAAAGCACCTACAAAAATATCGTCAAAAACGTTAT TCACCGATGCCGTATTATTGGAGTTGGTTGATAAAGAACAATTATCCAGTTTGACAGATCTTGCTAATAATCCTAACTAT TCAGCGATTAAAGATATATTGCCAAAATCAATACCTTTGTTAGCACTTAATGTGGAAATGATCATAGCGAATCGTCCTGA CATTGTTTTTGCTGCTAATTGGAGTGATGCATCAAAGTTAGCGATTATTGAGAGTGCTGGTATCCCGGTTTATCGCATTC AAACGCCTAATACCTTAAAAGAGGTTGAAACCGAGATTTTGCGAGTCGGTGATATTGTTAATCGTCGACTTGCTGCTGAG CGAGTCATCGAAGATATGCAACAGCGTTTACAGCAAGAGGTTATCTTACCTAAAAAGCGATTAACTGCTTTGGATTATAA TCCGTGGGGAACATCGAGCGGTCAAGATTCTACTTGGGATGAAGTCTTAAAACAGGCAAATCTGAATAATGCCATTGAAG GGCTAGTGAGTGATAAATACGGGCAAGTTCCCGTATCAAAAGAGATGGTCATTGCATTAAATCCAGATATTTTATTTATA CCAGCGTGGGTGTATGGAGATGAAAAAGGTGCTGATAAATTTAAGCAAGACGTTTTATCTGATCCTTCATTACAATCCGT TAATGCCATTAAAGAAGGTCGGGTCTATCAAATGCCACATGTGTTAAGAAGTGTTTATAGCCAATATATTATTGATGCGA TTCTGTTTGTTAATCACTCTGCCTATAAGAAACTCTGA
Upstream 100 bases:
>100_bases GGTGAGAATCCGTAACGGGCGCGCCACTGTGAGAGCTTGCAAGAGTTTGAGTCAGATACGAAGTTGGTTCATATTATGTA CGCGATTTACAGGAGTTGCC
Downstream 100 bases:
>100_bases TGCCTTTTTATCGTTTAACCTCTTTTCAAGCTATTGTCTCTACGTGTTTATTTATTGGATTATTCTTAACATATTTAAGT CTTGGTGCGGTTCACATTCC
Product: ABC transporter, periplasmic component
Products: NA
Alternate protein names: Fe ABC Transporter; ABC-Type Transport System Periplasmic Component; MoxR-Like ATPases-Like; Iron ABC Transporter Periplasmic Protein; ABC Transporter Periplasmic Component; Ferric Ion ABC Transpoter
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MRWLALNPFIIVFSLLLSWSTMAETTYPLHVVDGLGNTVILEKAPTKISSKTLFTDAVLLELVDKEQLSSLTDLANNPNY SAIKDILPKSIPLLALNVEMIIANRPDIVFAANWSDASKLAIIESAGIPVYRIQTPNTLKEVETEILRVGDIVNRRLAAE RVIEDMQQRLQQEVILPKKRLTALDYNPWGTSSGQDSTWDEVLKQANLNNAIEGLVSDKYGQVPVSKEMVIALNPDILFI PAWVYGDEKGADKFKQDVLSDPSLQSVNAIKEGRVYQMPHVLRSVYSQYIIDAILFVNHSAYKKL
Sequences:
>Translated_305_residues MRWLALNPFIIVFSLLLSWSTMAETTYPLHVVDGLGNTVILEKAPTKISSKTLFTDAVLLELVDKEQLSSLTDLANNPNY SAIKDILPKSIPLLALNVEMIIANRPDIVFAANWSDASKLAIIESAGIPVYRIQTPNTLKEVETEILRVGDIVNRRLAAE RVIEDMQQRLQQEVILPKKRLTALDYNPWGTSSGQDSTWDEVLKQANLNNAIEGLVSDKYGQVPVSKEMVIALNPDILFI PAWVYGDEKGADKFKQDVLSDPSLQSVNAIKEGRVYQMPHVLRSVYSQYIIDAILFVNHSAYKKL >Mature_305_residues MRWLALNPFIIVFSLLLSWSTMAETTYPLHVVDGLGNTVILEKAPTKISSKTLFTDAVLLELVDKEQLSSLTDLANNPNY SAIKDILPKSIPLLALNVEMIIANRPDIVFAANWSDASKLAIIESAGIPVYRIQTPNTLKEVETEILRVGDIVNRRLAAE RVIEDMQQRLQQEVILPKKRLTALDYNPWGTSSGQDSTWDEVLKQANLNNAIEGLVSDKYGQVPVSKEMVIALNPDILFI PAWVYGDEKGADKFKQDVLSDPSLQSVNAIKEGRVYQMPHVLRSVYSQYIIDAILFVNHSAYKKL
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34149; Mature: 34149
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLALNPFIIVFSLLLSWSTMAETTYPLHVVDGLGNTVILEKAPTKISSKTLFTDAVLL CCEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHH ELVDKEQLSSLTDLANNPNYSAIKDILPKSIPLLALNVEMIIANRPDIVFAANWSDASKL HHHCHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEEEEECCCCEEEEECCCCCCEE AIIESAGIPVYRIQTPNTLKEVETEILRVGDIVNRRLAAERVIEDMQQRLQQEVILPKKR EEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LTALDYNPWGTSSGQDSTWDEVLKQANLNNAIEGLVSDKYGQVPVSKEMVIALNPDILFI HEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCEEEE PAWVYGDEKGADKFKQDVLSDPSLQSVNAIKEGRVYQMPHVLRSVYSQYIIDAILFVNHS EEEEECCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCCH AYKKL HHHCC >Mature Secondary Structure MRWLALNPFIIVFSLLLSWSTMAETTYPLHVVDGLGNTVILEKAPTKISSKTLFTDAVLL CCEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHH ELVDKEQLSSLTDLANNPNYSAIKDILPKSIPLLALNVEMIIANRPDIVFAANWSDASKL HHHCHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEEEEECCCCEEEEECCCCCCEE AIIESAGIPVYRIQTPNTLKEVETEILRVGDIVNRRLAAERVIEDMQQRLQQEVILPKKR EEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LTALDYNPWGTSSGQDSTWDEVLKQANLNNAIEGLVSDKYGQVPVSKEMVIALNPDILFI HEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCEEEE PAWVYGDEKGADKFKQDVLSDPSLQSVNAIKEGRVYQMPHVLRSVYSQYIIDAILFVNHS EEEEECCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCCH AYKKL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA