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The map label for this gene is glpQ [H]

Identifier: 59714141

GI number: 59714141

Start: 1077007

End: 1077750

Strand: Reverse

Name: glpQ [H]

Synonym: VF_A0958

Alternate gene names: 59714141

Gene position: 1077750-1077007 (Counterclockwise)

Preceding gene: 59714142

Following gene: 59714140

Centisome position: 81.01

GC content: 36.02

Gene sequence:

>744_bases
ATGAAAACATTAATAGCTCATCGTGGAATGTCTTCTCTGGCTCCTGAAAATACCCTTTCAGCATTCTCATTATGTAAAGA
TCATGGCGTTCAATGGTTTGAATGTGATGTCGATATTCTACAAGATGGCACTGTGATCATATCTCATGACGATACGTTAG
ATCGTTGCACTGATAAAAGTGGTCGCTTGTGTGATATTAGTAGTGCTGATTTATCTTCTATTGATGCTGGCAGTTGGTTT
AGTGATGACTATATTGATGAGCGTTTACCGACGATTCAACAATTAATTACATTAGCGAACGAAAAAGAATTGAATTTGAA
TATCGAAATCAAATCATGTTCAGCGAGCGCAAAGCTTAGTCATTTATTGATTGATAATCTGATTACGGCATTAAAAGAGC
TGAACTCTGAAAGAGAGCTGATCATTTCAAGCTTTAATCATCTTGTTTTATCTGAATTTAAGCGTAAAAGTCCTGAAACC
AAAGTTGCGTGTTTATTTGAAAGTCACACTTTATGGGATGACTGGAATTCAATTATTGAGTGGTGCCAAGCGGATTATAT
TCACCCTGAAGAAAAAGGATTAACTCGCGATATGGTGCAAAAATTTAAAGCATCAGGCATTAAAGTGAATGTTTGGACGG
TGAATGATTTGGCTCGTGCAAATGAACTATTTAACTGGGGTGTAGATGGTATCTGTACTGATATAGCTCATAAGTTCCCT
TCTAAATACAAAGCAAAACAATAA

Upstream 100 bases:

>100_bases
CGAGCGTTCGAATGCGCATTTTGTTCGTTTCTGTCACATTTATGCAATGACCTAAGCGTTATTATTATTTCTATCTTTTA
ACACGTGAAATAGGTTAACA

Downstream 100 bases:

>100_bases
TAACAAAACTAATAATTCAATAACGTGAAAGGATTGCTCAAATGAACTTATTTGAAAAGATTGGGTTTACCAGTCGAAAT
CAGCTATTCGGTTTTTTCTC

Product: glycerophosphoryl diester phosphodiesterase GlpQ (UgpQ)

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKTLIAHRGMSSLAPENTLSAFSLCKDHGVQWFECDVDILQDGTVIISHDDTLDRCTDKSGRLCDISSADLSSIDAGSWF
SDDYIDERLPTIQQLITLANEKELNLNIEIKSCSASAKLSHLLIDNLITALKELNSERELIISSFNHLVLSEFKRKSPET
KVACLFESHTLWDDWNSIIEWCQADYIHPEEKGLTRDMVQKFKASGIKVNVWTVNDLARANELFNWGVDGICTDIAHKFP
SKYKAKQ

Sequences:

>Translated_247_residues
MKTLIAHRGMSSLAPENTLSAFSLCKDHGVQWFECDVDILQDGTVIISHDDTLDRCTDKSGRLCDISSADLSSIDAGSWF
SDDYIDERLPTIQQLITLANEKELNLNIEIKSCSASAKLSHLLIDNLITALKELNSERELIISSFNHLVLSEFKRKSPET
KVACLFESHTLWDDWNSIIEWCQADYIHPEEKGLTRDMVQKFKASGIKVNVWTVNDLARANELFNWGVDGICTDIAHKFP
SKYKAKQ
>Mature_247_residues
MKTLIAHRGMSSLAPENTLSAFSLCKDHGVQWFECDVDILQDGTVIISHDDTLDRCTDKSGRLCDISSADLSSIDAGSWF
SDDYIDERLPTIQQLITLANEKELNLNIEIKSCSASAKLSHLLIDNLITALKELNSERELIISSFNHLVLSEFKRKSPET
KVACLFESHTLWDDWNSIIEWCQADYIHPEEKGLTRDMVQKFKASGIKVNVWTVNDLARANELFNWGVDGICTDIAHKFP
SKYKAKQ

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=246, Percent_Identity=25.2032520325203, Blast_Score=80, Evalue=1e-15,
Organism=Escherichia coli, GI1789858, Length=233, Percent_Identity=33.4763948497854, Blast_Score=130, Evalue=6e-32,
Organism=Caenorhabditis elegans, GI17542344, Length=273, Percent_Identity=22.7106227106227, Blast_Score=71, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 27923; Mature: 27923

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLIAHRGMSSLAPENTLSAFSLCKDHGVQWFECDVDILQDGTVIISHDDTLDRCTDKS
CCCHHHHCCCHHCCCCHHHHHHHHHHHCCCEEEEECCEEECCCEEEEECCCHHHHHCCCC
GRLCDISSADLSSIDAGSWFSDDYIDERLPTIQQLITLANEKELNLNIEIKSCSASAKLS
CCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHH
HLLIDNLITALKELNSERELIISSFNHLVLSEFKRKSPETKVACLFESHTLWDDWNSIIE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHH
WCQADYIHPEEKGLTRDMVQKFKASGIKVNVWTVNDLARANELFNWGVDGICTDIAHKFP
HHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHCC
SKYKAKQ
CCCCCCC
>Mature Secondary Structure
MKTLIAHRGMSSLAPENTLSAFSLCKDHGVQWFECDVDILQDGTVIISHDDTLDRCTDKS
CCCHHHHCCCHHCCCCHHHHHHHHHHHCCCEEEEECCEEECCCEEEEECCCHHHHHCCCC
GRLCDISSADLSSIDAGSWFSDDYIDERLPTIQQLITLANEKELNLNIEIKSCSASAKLS
CCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHH
HLLIDNLITALKELNSERELIISSFNHLVLSEFKRKSPETKVACLFESHTLWDDWNSIIE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHH
WCQADYIHPEEKGLTRDMVQKFKASGIKVNVWTVNDLARANELFNWGVDGICTDIAHKFP
HHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHCC
SKYKAKQ
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]