| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
Click here to switch to the map view.
The map label for this gene is malF [H]
Identifier: 59713981
GI number: 59713981
Start: 894571
End: 896115
Strand: Reverse
Name: malF [H]
Synonym: VF_A0798
Alternate gene names: 59713981
Gene position: 896115-894571 (Counterclockwise)
Preceding gene: 59713982
Following gene: 59713980
Centisome position: 67.36
GC content: 38.71
Gene sequence:
>1545_bases ATGACAACAGCAGTTGCTTCTCAAACGAATTATAAATCTGTACTGAAATGGGGGATTTTATCTGCCGTAGCAGCACTGAA TGGTTACGTTTGTGTTCTTATGTATTCTCGTGGTGAAACTGCATTTGCAATGTTAACACTCGTATTAACGGCACTTGCAG TTTATGTGTTTGGTAGTAAAAAGAATTACGCTCACCGTTATACCTATCCGGGTATCGCAGGGATGATTTTATTCATTATT TTCCCATTGGTTTATACGGTTGGTTTAGCATTTACAAACTACAGCGCAACGAACCAAGTCACCCTTGAACGAGCACAAGC TGTGCATTTAACGAAAACATACCAAAGCGGAAAAAGTTATAGTTTTCAGTTAATGAATCAAGGTAATGGTTATGCGTTAA CGATTAAAGATTCTGGACAATTATTCGCAACAGAAACCTTTAATTTAGCTGAGGCCGTTGAGCGCAAACTTGAATTAGCT CCTGTGGATTCTGTTAAAGGCAAAAAAGCAACAATTAAGCAGATCATTGCTAAGCGCCCAAATTTAAATCTTATCACGCT TTCTTTACCATCAGGTGAAGAGATCCAAATGAGTGGGTTACGTAAGTTTGCGGCGGTTGGTCCACTGTTTGTTATGCAAG AAGATGGCGAAACGCTCTATAACAACAAAACAGAAACGTATTTTAAAGCAAATCACGATACGGGTTTTTATCAAGAAGTA GATGATAACGATGTCTTTGTTGGTGACCCAATTTCTCCTGGCTTTATCGTTAATGTTGGTGGCGCAAACTTTGAGCGTAT TTGGAAAGATGACGGCATCAAAGAGCCTTTCATTAGTATCTTTATTTGGACAGTAATTTTTGCAACTTGTACTGTTGTAT TTACGCTTGCGATCGGCCTAGTGCTTGCCGCAGTTGTACAATGGGAAGAGTTAAAGGGACGTGCCGTTTATCGTTTATTG TTAATACTCCCTTATGCGGTACCAGCGTTCATTTCAATCTTGATTTTCCGAGGCTTGTTTAACCAAAGTTTTGGTGAGAT CAATATGCTATTAGACAGCATGTTTGGTATTCAACCAAATTGGTTCTCTGATCCGTTCACTGCAAAAGTGATGGTATTGA TTGTAAATACTTGGTTAGGTTTTCCATACATGATGATCTTATGTATGGGGCTATTGAAGTCTATACCTGAAGATTTGTAT GAAGCATCAGCCATTGATGGTGCTGGACCACTTCAAAACTTCTTGAAGATCACGGTTCCTATGATGGTGAAACCATTAAC ACCATTATTAATTGCAGCATTTGCTTTTAACTTTAATAACTTTGTAATGATTGCCTTATTAACTAAAGGTGGTCCAAACA TGATAGGTACAACAGAGCCTGCGGGTTATACGGACTTATTAGTAAGTTATACCTACCGAATTGCGTTTGAAGGTAGTGGT GGTCAAGACTTTGGTCTGGCAAGTGCGATAGCGACGTTGATCTTCTTACTAGTAGGTGGTCTGGCACTACTGAACCTACG TTTTACAAAATTATCAAATAATTAA
Upstream 100 bases:
>100_bases TAATAATAGCGAATCATCTCTTCTTTAATATCCACATGAGTAAGCCTATTTTATCTAAGTGGGCTTACTAGGTTGGTATT TTTAAAAGGTCTTGAAGCTT
Downstream 100 bases:
>100_bases TGTTTGAGTAGCTATTTATCTAAAGTGATATTTAGCTACTTAACTTCAAAAAATAAGGATTCATTGATATGCCAATGGTT CAAGGAAAAAACTTAAAATA
Product: maltose transporter membrane protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MTTAVASQTNYKSVLKWGILSAVAALNGYVCVLMYSRGETAFAMLTLVLTALAVYVFGSKKNYAHRYTYPGIAGMILFII FPLVYTVGLAFTNYSATNQVTLERAQAVHLTKTYQSGKSYSFQLMNQGNGYALTIKDSGQLFATETFNLAEAVERKLELA PVDSVKGKKATIKQIIAKRPNLNLITLSLPSGEEIQMSGLRKFAAVGPLFVMQEDGETLYNNKTETYFKANHDTGFYQEV DDNDVFVGDPISPGFIVNVGGANFERIWKDDGIKEPFISIFIWTVIFATCTVVFTLAIGLVLAAVVQWEELKGRAVYRLL LILPYAVPAFISILIFRGLFNQSFGEINMLLDSMFGIQPNWFSDPFTAKVMVLIVNTWLGFPYMMILCMGLLKSIPEDLY EASAIDGAGPLQNFLKITVPMMVKPLTPLLIAAFAFNFNNFVMIALLTKGGPNMIGTTEPAGYTDLLVSYTYRIAFEGSG GQDFGLASAIATLIFLLVGGLALLNLRFTKLSNN
Sequences:
>Translated_514_residues MTTAVASQTNYKSVLKWGILSAVAALNGYVCVLMYSRGETAFAMLTLVLTALAVYVFGSKKNYAHRYTYPGIAGMILFII FPLVYTVGLAFTNYSATNQVTLERAQAVHLTKTYQSGKSYSFQLMNQGNGYALTIKDSGQLFATETFNLAEAVERKLELA PVDSVKGKKATIKQIIAKRPNLNLITLSLPSGEEIQMSGLRKFAAVGPLFVMQEDGETLYNNKTETYFKANHDTGFYQEV DDNDVFVGDPISPGFIVNVGGANFERIWKDDGIKEPFISIFIWTVIFATCTVVFTLAIGLVLAAVVQWEELKGRAVYRLL LILPYAVPAFISILIFRGLFNQSFGEINMLLDSMFGIQPNWFSDPFTAKVMVLIVNTWLGFPYMMILCMGLLKSIPEDLY EASAIDGAGPLQNFLKITVPMMVKPLTPLLIAAFAFNFNNFVMIALLTKGGPNMIGTTEPAGYTDLLVSYTYRIAFEGSG GQDFGLASAIATLIFLLVGGLALLNLRFTKLSNN >Mature_513_residues TTAVASQTNYKSVLKWGILSAVAALNGYVCVLMYSRGETAFAMLTLVLTALAVYVFGSKKNYAHRYTYPGIAGMILFIIF PLVYTVGLAFTNYSATNQVTLERAQAVHLTKTYQSGKSYSFQLMNQGNGYALTIKDSGQLFATETFNLAEAVERKLELAP VDSVKGKKATIKQIIAKRPNLNLITLSLPSGEEIQMSGLRKFAAVGPLFVMQEDGETLYNNKTETYFKANHDTGFYQEVD DNDVFVGDPISPGFIVNVGGANFERIWKDDGIKEPFISIFIWTVIFATCTVVFTLAIGLVLAAVVQWEELKGRAVYRLLL ILPYAVPAFISILIFRGLFNQSFGEINMLLDSMFGIQPNWFSDPFTAKVMVLIVNTWLGFPYMMILCMGLLKSIPEDLYE ASAIDGAGPLQNFLKITVPMMVKPLTPLLIAAFAFNFNNFVMIALLTKGGPNMIGTTEPAGYTDLLVSYTYRIAFEGSGG QDFGLASAIATLIFLLVGGLALLNLRFTKLSNN
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790465, Length=504, Percent_Identity=56.1507936507937, Blast_Score=583, Evalue=1e-168, Organism=Escherichia coli, GI1787570, Length=260, Percent_Identity=28.4615384615385, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1789861, Length=256, Percent_Identity=31.25, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 56546; Mature: 56415
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAVASQTNYKSVLKWGILSAVAALNGYVCVLMYSRGETAFAMLTLVLTALAVYVFGSK CCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC KNYAHRYTYPGIAGMILFIIFPLVYTVGLAFTNYSATNQVTLERAQAVHLTKTYQSGKSY CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCE SFQLMNQGNGYALTIKDSGQLFATETFNLAEAVERKLELAPVDSVKGKKATIKQIIAKRP EEEEEECCCCEEEEEECCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC NLNLITLSLPSGEEIQMSGLRKFAAVGPLFVMQEDGETLYNNKTETYFKANHDTGFYQEV CCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCHHHCCCCCEEEEECCCCCCCEEC DDNDVFVGDPISPGFIVNVGGANFERIWKDDGIKEPFISIFIWTVIFATCTVVFTLAIGL CCCCEEECCCCCCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VLAAVVQWEELKGRAVYRLLLILPYAVPAFISILIFRGLFNQSFGEINMLLDSMFGIQPN HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC WFSDPFTAKVMVLIVNTWLGFPYMMILCMGLLKSIPEDLYEASAIDGAGPLQNFLKITVP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH MMVKPLTPLLIAAFAFNFNNFVMIALLTKGGPNMIGTTEPAGYTDLLVSYTYRIAFEGSG HHHCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHEEEEEEEEEECCC GQDFGLASAIATLIFLLVGGLALLNLRFTKLSNN CCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC >Mature Secondary Structure TTAVASQTNYKSVLKWGILSAVAALNGYVCVLMYSRGETAFAMLTLVLTALAVYVFGSK CCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC KNYAHRYTYPGIAGMILFIIFPLVYTVGLAFTNYSATNQVTLERAQAVHLTKTYQSGKSY CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCE SFQLMNQGNGYALTIKDSGQLFATETFNLAEAVERKLELAPVDSVKGKKATIKQIIAKRP EEEEEECCCCEEEEEECCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC NLNLITLSLPSGEEIQMSGLRKFAAVGPLFVMQEDGETLYNNKTETYFKANHDTGFYQEV CCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCHHHCCCCCEEEEECCCCCCCEEC DDNDVFVGDPISPGFIVNVGGANFERIWKDDGIKEPFISIFIWTVIFATCTVVFTLAIGL CCCCEEECCCCCCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VLAAVVQWEELKGRAVYRLLLILPYAVPAFISILIFRGLFNQSFGEINMLLDSMFGIQPN HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC WFSDPFTAKVMVLIVNTWLGFPYMMILCMGLLKSIPEDLYEASAIDGAGPLQNFLKITVP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH MMVKPLTPLLIAAFAFNFNNFVMIALLTKGGPNMIGTTEPAGYTDLLVSYTYRIAFEGSG HHHCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHEEEEEEEEEECCC GQDFGLASAIATLIFLLVGGLALLNLRFTKLSNN CCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA