| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
Click here to switch to the map view.
The map label for this gene is 59713925
Identifier: 59713925
GI number: 59713925
Start: 837994
End: 839019
Strand: Reverse
Name: 59713925
Synonym: VF_A0742
Alternate gene names: NA
Gene position: 839019-837994 (Counterclockwise)
Preceding gene: 59713926
Following gene: 59713924
Centisome position: 63.07
GC content: 38.3
Gene sequence:
>1026_bases ATGAAAGCATTACGAATTTGGTTTGGTTGTGTTGTTGGATTTGCCATGTGCACGGTATTTGGCTGGTCGAATGGTATGTT TGGTACCTTGTTCCCATTGTTTATTTTATCTAATTTGAACCGCTGGAATGCCCAGATGTTCATACAGCTGTTAATCAGTA TTTTTTGGGTAGGGATTCAAGTGTCATTGATCGTTGGCTTTTTACAGCCATACCCATTACTGATGACCGTTGCCGTTGGT ATTATGCTGCTTTTTAAATGTCACGCCATGCATTATAAAGCCAGTTATCTATTCGGATACACAGGGCTATTGGTAGGTTC AATTTTGTTGAATTTTGGGTCATATCCAACTTTTGATTTAGAGAACTTTATTATTGGGGTATGGGTTGCTGCCATTATGA TGGTGCCAATTTGCGCCATGGCTTTTTATTTGTTTCCTGATCCAATTGAAGCGCACACTCCAATCTTGAAAGTAGAAGGG CAAAGTAAAGATCCAAGAGACATGTTAGAGCAAACGGCTTTGGGGTGGATGGTCGCCATGATTGTGTTTTTGATTTTCGA AATCGCAAATTTAAATGATTCATTATCCGCTCAAGCGTCGATGCTAATTATGCTTTCGCCAATGACATTAGTAGGATCAT TGATGATGGCTCGTATCCGAATCGTAGGAACGTTAGCTGGTTGTATGGCAGCCATGGCTATTCAGTTAGTGTTATATGAT TTATACGATAATCCTATCTTATATATATTAAGTTTTGCGATTGCATCAGGTTATTTTTGTAAATGGTTAGCCAGTGAAAA TCCTGCTATTAAAGGAATAGGGTTCTCTGCGATGGCTGCATTAACAATACCTATTACAGGTGCAATTCCGGGACAAAAAG ACGCATTCTTCTCTATTTTATATCGAGTGTCGTCTATTGTTGTTGCTGTTATTGTCACAAGTATTTTAATTTGGATCTGT TATCGATTAATTAAGTTGTTTCCTATTTTCTTTCGAGGTGTCGAGCGAGAAGAGAAAGTGCATTAA
Upstream 100 bases:
>100_bases AATTATTTACACTTCAGGAAACAGTGTGATTGATTACATTGGCCATAGTTTAATTACCATGATCAGCTACTTACATTACA TTTATTAGTGTGAGGCTTAC
Downstream 100 bases:
>100_bases GACATTGAATGATTGAGAAAATAGCCAAGAGGTTTGTAGATTATTATGAATTTCTTGGATTTTTTTGTTTATGTGATAAC GTCTGTGTAGTTGAAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Permease
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKALRIWFGCVVGFAMCTVFGWSNGMFGTLFPLFILSNLNRWNAQMFIQLLISIFWVGIQVSLIVGFLQPYPLLMTVAVG IMLLFKCHAMHYKASYLFGYTGLLVGSILLNFGSYPTFDLENFIIGVWVAAIMMVPICAMAFYLFPDPIEAHTPILKVEG QSKDPRDMLEQTALGWMVAMIVFLIFEIANLNDSLSAQASMLIMLSPMTLVGSLMMARIRIVGTLAGCMAAMAIQLVLYD LYDNPILYILSFAIASGYFCKWLASENPAIKGIGFSAMAALTIPITGAIPGQKDAFFSILYRVSSIVVAVIVTSILIWIC YRLIKLFPIFFRGVEREEKVH
Sequences:
>Translated_341_residues MKALRIWFGCVVGFAMCTVFGWSNGMFGTLFPLFILSNLNRWNAQMFIQLLISIFWVGIQVSLIVGFLQPYPLLMTVAVG IMLLFKCHAMHYKASYLFGYTGLLVGSILLNFGSYPTFDLENFIIGVWVAAIMMVPICAMAFYLFPDPIEAHTPILKVEG QSKDPRDMLEQTALGWMVAMIVFLIFEIANLNDSLSAQASMLIMLSPMTLVGSLMMARIRIVGTLAGCMAAMAIQLVLYD LYDNPILYILSFAIASGYFCKWLASENPAIKGIGFSAMAALTIPITGAIPGQKDAFFSILYRVSSIVVAVIVTSILIWIC YRLIKLFPIFFRGVEREEKVH >Mature_341_residues MKALRIWFGCVVGFAMCTVFGWSNGMFGTLFPLFILSNLNRWNAQMFIQLLISIFWVGIQVSLIVGFLQPYPLLMTVAVG IMLLFKCHAMHYKASYLFGYTGLLVGSILLNFGSYPTFDLENFIIGVWVAAIMMVPICAMAFYLFPDPIEAHTPILKVEG QSKDPRDMLEQTALGWMVAMIVFLIFEIANLNDSLSAQASMLIMLSPMTLVGSLMMARIRIVGTLAGCMAAMAIQLVLYD LYDNPILYILSFAIASGYFCKWLASENPAIKGIGFSAMAALTIPITGAIPGQKDAFFSILYRVSSIVVAVIVTSILIWIC YRLIKLFPIFFRGVEREEKVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37985; Mature: 37985
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALRIWFGCVVGFAMCTVFGWSNGMFGTLFPLFILSNLNRWNAQMFIQLLISIFWVGIQ CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VSLIVGFLQPYPLLMTVAVGIMLLFKCHAMHYKASYLFGYTGLLVGSILLNFGSYPTFDL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH ENFIIGVWVAAIMMVPICAMAFYLFPDPIEAHTPILKVEGQSKDPRDMLEQTALGWMVAM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH IVFLIFEIANLNDSLSAQASMLIMLSPMTLVGSLMMARIRIVGTLAGCMAAMAIQLVLYD HHHHHHHHHCCCCCHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYDNPILYILSFAIASGYFCKWLASENPAIKGIGFSAMAALTIPITGAIPGQKDAFFSIL HCCCHHHHHHHHHHHCCHHHHHHCCCCCCEECCCHHHHHHHEEEEECCCCCCHHHHHHHH YRVSSIVVAVIVTSILIWICYRLIKLFPIFFRGVEREEKVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure MKALRIWFGCVVGFAMCTVFGWSNGMFGTLFPLFILSNLNRWNAQMFIQLLISIFWVGIQ CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VSLIVGFLQPYPLLMTVAVGIMLLFKCHAMHYKASYLFGYTGLLVGSILLNFGSYPTFDL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH ENFIIGVWVAAIMMVPICAMAFYLFPDPIEAHTPILKVEGQSKDPRDMLEQTALGWMVAM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH IVFLIFEIANLNDSLSAQASMLIMLSPMTLVGSLMMARIRIVGTLAGCMAAMAIQLVLYD HHHHHHHHHCCCCCHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYDNPILYILSFAIASGYFCKWLASENPAIKGIGFSAMAALTIPITGAIPGQKDAFFSIL HCCCHHHHHHHHHHHCCHHHHHHCCCCCCEECCCHHHHHHHEEEEECCCCCCHHHHHHHH YRVSSIVVAVIVTSILIWICYRLIKLFPIFFRGVEREEKVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA