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The map label for this gene is lolE [C]

Identifier: 59713919

GI number: 59713919

Start: 833067

End: 834335

Strand: Reverse

Name: lolE [C]

Synonym: VF_A0736

Alternate gene names: 59713919

Gene position: 834335-833067 (Counterclockwise)

Preceding gene: 59713920

Following gene: 59713918

Centisome position: 62.72

GC content: 41.77

Gene sequence:

>1269_bases
ATGCGCAAGTTAATCTCACTATTACCTTATTCTCTGCGTTTAGCGTGGTTGAATTTATTGCGAAACGGCCGTCGTAGCGC
ACTTTCTATCTTAATTATTACGATTACCGTATTTGCATTGACCAGTGCGGGTGGGTTTGGTTTATATACTTATGACTCAC
TGAAAGAATCGACAGCCAGAGATACGGGCCATCTTACATTAAGTCAACCGGGTTACTTTGAAAGCGATGAAGAGATGCCA
TTAAGTAATGGATTATCAGATACATCAGAATTAATTCGCACCATGATGAAATACGATGAGGTAAGAGGCGTACAACCTCG
AATTGATTTTACAGGGCTAATTTCTAATGGTGTAAAATCGACGATTTTCATGGGAACTGGGGTGAACGATCGAGAGTTCG
ATATGAAAGGCCCATTTTTAGACATGAGATCAGGAAAAACGTTAACCGACATTACCTCAAGTCGATACGATGTCATGGAG
CCTGAAATCATGCTTGGAGTGGATTTAGCGAGAAACCTCAACGTCAGTGTAGGTGACTGGGTAACCATACTGGCAACCAC
CAGCGAAGGGGCACTTAACGCGTTTGATTTTAAAGTGCATGGTACCTATTCAACGGGGGTGCCTGAGTTAGATAAACGTC
AGCTTTATATTCATATCGATTCTGCACAAGAGCTACTGCTATCAGAGAAAGTGAGTACCTTATCGGTATTTTTATTTGAT
ACCGAGAAAACTGCAGAGTTACATCAACGATTAGCTCAAGAGTTAGAAACAATGCCACTTGATTACGACGTTGAAATCAC
TCCATGGCAAGAACGCGCATTTTTCTACAACAAAGTGAAAGATTTATATGATCTTATCTTTGGTGTGATGGGCTTTGTGA
TGGGATTAGTCGTTTTTGTGGCTTTGTTTAATACCATGACGATGTCAGTAACAGAAAGAACACGTGAGATCGGCACGTTA
TCCGCATTAGGAAGCTATCCTAACGAGATCATTCACTCATTCTTACGAGAAGCTGGCTTACTTGCGGTAATAGGAGTGGT
GCTTGGTGCAGTAATGACAGCCTTAACGACAATACTGCTGTTAGTGGTTGATGTGCAGATGCCACCACCACCGGGAAGAA
CGGACGGTTACCCACTGAATATTTATTTCTCATTTGAATTAGTGGCTTATGCTGGCGTTGGTGTTGTGTGTATTTGTTTA
CTGGCAGCATACTTATCGGCCAAAAAAGGCGTGAAAAAACCCATTACAGAGGCGCTTATTTATGTCTAA

Upstream 100 bases:

>100_bases
GCACCACCTTTATTGTTGCAACGCATGATTATCGAATGGCGCAACATTGCGATACGTGCATCAACTTACTGGATGGAACC
ATCAGCAAGGAGGCCGTGTC

Downstream 100 bases:

>100_bases
ATTATCTCACTTATTTATTCTGTTCGTGCTTGTTGGCTTCCAATCGACCGCAACCGCAACAATACAAAGTATGGATAACA
CAAGCAGTCTAACCGAGGCT

Product: ABC transporter permease protein

Products: NA

Alternate protein names: ABC-Type Transport System Permease Component; ABC Transporter Permease Protein; ABC Efflux Pump Inner Membrane Subunit; Permease Involved In Lipoprotein Release; Efflux Abc Transporter Permease Protein; ABC Transporter Permease; Permease Of ABC-Transporter System; ABC Transporter Transmembrane Protein; BC-Type Lipoprotein Transporter Permease Protein.; Abc Efflux Pump Inner Membrane Subunit; Permease Of ABC Transporter System

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MRKLISLLPYSLRLAWLNLLRNGRRSALSILIITITVFALTSAGGFGLYTYDSLKESTARDTGHLTLSQPGYFESDEEMP
LSNGLSDTSELIRTMMKYDEVRGVQPRIDFTGLISNGVKSTIFMGTGVNDREFDMKGPFLDMRSGKTLTDITSSRYDVME
PEIMLGVDLARNLNVSVGDWVTILATTSEGALNAFDFKVHGTYSTGVPELDKRQLYIHIDSAQELLLSEKVSTLSVFLFD
TEKTAELHQRLAQELETMPLDYDVEITPWQERAFFYNKVKDLYDLIFGVMGFVMGLVVFVALFNTMTMSVTERTREIGTL
SALGSYPNEIIHSFLREAGLLAVIGVVLGAVMTALTTILLLVVDVQMPPPPGRTDGYPLNIYFSFELVAYAGVGVVCICL
LAAYLSAKKGVKKPITEALIYV

Sequences:

>Translated_422_residues
MRKLISLLPYSLRLAWLNLLRNGRRSALSILIITITVFALTSAGGFGLYTYDSLKESTARDTGHLTLSQPGYFESDEEMP
LSNGLSDTSELIRTMMKYDEVRGVQPRIDFTGLISNGVKSTIFMGTGVNDREFDMKGPFLDMRSGKTLTDITSSRYDVME
PEIMLGVDLARNLNVSVGDWVTILATTSEGALNAFDFKVHGTYSTGVPELDKRQLYIHIDSAQELLLSEKVSTLSVFLFD
TEKTAELHQRLAQELETMPLDYDVEITPWQERAFFYNKVKDLYDLIFGVMGFVMGLVVFVALFNTMTMSVTERTREIGTL
SALGSYPNEIIHSFLREAGLLAVIGVVLGAVMTALTTILLLVVDVQMPPPPGRTDGYPLNIYFSFELVAYAGVGVVCICL
LAAYLSAKKGVKKPITEALIYV
>Mature_422_residues
MRKLISLLPYSLRLAWLNLLRNGRRSALSILIITITVFALTSAGGFGLYTYDSLKESTARDTGHLTLSQPGYFESDEEMP
LSNGLSDTSELIRTMMKYDEVRGVQPRIDFTGLISNGVKSTIFMGTGVNDREFDMKGPFLDMRSGKTLTDITSSRYDVME
PEIMLGVDLARNLNVSVGDWVTILATTSEGALNAFDFKVHGTYSTGVPELDKRQLYIHIDSAQELLLSEKVSTLSVFLFD
TEKTAELHQRLAQELETMPLDYDVEITPWQERAFFYNKVKDLYDLIFGVMGFVMGLVVFVALFNTMTMSVTERTREIGTL
SALGSYPNEIIHSFLREAGLLAVIGVVLGAVMTALTTILLLVVDVQMPPPPGRTDGYPLNIYFSFELVAYAGVGVVCICL
LAAYLSAKKGVKKPITEALIYV

Specific function: Part Of An ATP-Dependent Transport System Lolcde Responsible For The Release Of Lipoproteins Targeted To The Outer Membrane From The Inner Membrane. Such A Release Is Dependent Of The Sorting-Signal (Absence Of An Asp At Position 2 Of The Mature Lipoprot

COG id: COG4591

COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46786; Mature: 46786

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLISLLPYSLRLAWLNLLRNGRRSALSILIITITVFALTSAGGFGLYTYDSLKESTAR
CCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCC
DTGHLTLSQPGYFESDEEMPLSNGLSDTSELIRTMMKYDEVRGVQPRIDFTGLISNGVKS
CCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCE
TIFMGTGVNDREFDMKGPFLDMRSGKTLTDITSSRYDVMEPEIMLGVDLARNLNVSVGDW
EEEEECCCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCCCCEEEECHHHCCCCCCCCCE
VTILATTSEGALNAFDFKVHGTYSTGVPELDKRQLYIHIDSAQELLLSEKVSTLSVFLFD
EEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHCCCEEEEEEEC
TEKTAELHQRLAQELETMPLDYDVEITPWQERAFFYNKVKDLYDLIFGVMGFVMGLVVFV
CCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALFNTMTMSVTERTREIGTLSALGSYPNEIIHSFLREAGLLAVIGVVLGAVMTALTTILL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LVVDVQMPPPPGRTDGYPLNIYFSFELVAYAGVGVVCICLLAAYLSAKKGVKKPITEALI
HHHHCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
YV
CC
>Mature Secondary Structure
MRKLISLLPYSLRLAWLNLLRNGRRSALSILIITITVFALTSAGGFGLYTYDSLKESTAR
CCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCC
DTGHLTLSQPGYFESDEEMPLSNGLSDTSELIRTMMKYDEVRGVQPRIDFTGLISNGVKS
CCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCE
TIFMGTGVNDREFDMKGPFLDMRSGKTLTDITSSRYDVMEPEIMLGVDLARNLNVSVGDW
EEEEECCCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCCCCEEEECHHHCCCCCCCCCE
VTILATTSEGALNAFDFKVHGTYSTGVPELDKRQLYIHIDSAQELLLSEKVSTLSVFLFD
EEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHCCCEEEEEEEC
TEKTAELHQRLAQELETMPLDYDVEITPWQERAFFYNKVKDLYDLIFGVMGFVMGLVVFV
CCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALFNTMTMSVTERTREIGTLSALGSYPNEIIHSFLREAGLLAVIGVVLGAVMTALTTILL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LVVDVQMPPPPGRTDGYPLNIYFSFELVAYAGVGVVCICLLAAYLSAKKGVKKPITEALI
HHHHCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
YV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA