| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713918
Identifier: 59713918
GI number: 59713918
Start: 832277
End: 833074
Strand: Reverse
Name: 59713918
Synonym: VF_A0735
Alternate gene names: NA
Gene position: 833074-832277 (Counterclockwise)
Preceding gene: 59713919
Following gene: 59713917
Centisome position: 62.62
GC content: 40.73
Gene sequence:
>798_bases ATGTCTAAATTATCTCACTTATTTATTCTGTTCGTGCTTGTTGGCTTCCAATCGACCGCAACCGCAACAATACAAAGTAT GGATAACACAAGCAGTCTAACCGAGGCTCAAGTGAAACAACTGGTGAAAAAGGCCGATGATTTTCGCTTAGGTGAAAGTT CAGCAAAAGTGGTTTCTGAGGTTAAGCTATACAAAAATGACGAGCTAGATAAAACTCGCCAATACACGGTATACACACGA GAAGATCGAGAATCTTTGGTGTTGTTTAATTCTCAAGTGGAAGCCGGACAAAAGATGCTGATGCTAGGGGATAACTATTG GTTACTCATGCCGAAAAGTCGCCGCCCAATTCGTATTACACCGATGCAAAAGTTACTCGGTGAAGCCTCTGTGGGTGACA TTTCAACGTTAACGTGGAGTGAGGATTATCAAGGTAAGTGGATTGAATCGACAACGTTCGAGCTAACCGATGGTCAAGCG ATTCAAACTGAGAAGATTAAACTAAAAGCGACAACAAAAGGCGCGAGTTATTTCACTATCGATTTATGGTTAGAGCAAGG AACGGGTTTTCCGATTAAAGCCGATTTGTATTTGCGGTCAGGAAAAATGGCCAAAGAAGCGTGGTTTATTAAAGGGGTAA GGGAAGGTGAAGCCAAAGTGATTTCAATGGTGTTAAACGATCAAATTCAAACCAATCAAAAAACGGTGATTGAATATAAA GAAATTACACCAACAGAGATTGCCGATAAATATTATAACCCTGCTTATCTGTCACGCACCAAACAGTTGGATTTGTGA
Upstream 100 bases:
>100_bases GTGGCTTATGCTGGCGTTGGTGTTGTGTGTATTTGTTTACTGGCAGCATACTTATCGGCCAAAAAAGGCGTGAAAAAACC CATTACAGAGGCGCTTATTT
Downstream 100 bases:
>100_bases TCATGAAATCTTGGCTAGAACGGCTAGTATATTGTAGTGCTTGGGTGGCTTCTTTAAGCGCTCAAGCCTCTGAGATGACT TTCGAGTGGGATTGGATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSKLSHLFILFVLVGFQSTATATIQSMDNTSSLTEAQVKQLVKKADDFRLGESSAKVVSEVKLYKNDELDKTRQYTVYTR EDRESLVLFNSQVEAGQKMLMLGDNYWLLMPKSRRPIRITPMQKLLGEASVGDISTLTWSEDYQGKWIESTTFELTDGQA IQTEKIKLKATTKGASYFTIDLWLEQGTGFPIKADLYLRSGKMAKEAWFIKGVREGEAKVISMVLNDQIQTNQKTVIEYK EITPTEIADKYYNPAYLSRTKQLDL
Sequences:
>Translated_265_residues MSKLSHLFILFVLVGFQSTATATIQSMDNTSSLTEAQVKQLVKKADDFRLGESSAKVVSEVKLYKNDELDKTRQYTVYTR EDRESLVLFNSQVEAGQKMLMLGDNYWLLMPKSRRPIRITPMQKLLGEASVGDISTLTWSEDYQGKWIESTTFELTDGQA IQTEKIKLKATTKGASYFTIDLWLEQGTGFPIKADLYLRSGKMAKEAWFIKGVREGEAKVISMVLNDQIQTNQKTVIEYK EITPTEIADKYYNPAYLSRTKQLDL >Mature_264_residues SKLSHLFILFVLVGFQSTATATIQSMDNTSSLTEAQVKQLVKKADDFRLGESSAKVVSEVKLYKNDELDKTRQYTVYTRE DRESLVLFNSQVEAGQKMLMLGDNYWLLMPKSRRPIRITPMQKLLGEASVGDISTLTWSEDYQGKWIESTTFELTDGQAI QTEKIKLKATTKGASYFTIDLWLEQGTGFPIKADLYLRSGKMAKEAWFIKGVREGEAKVISMVLNDQIQTNQKTVIEYKE ITPTEIADKYYNPAYLSRTKQLDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30203; Mature: 30072
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLSHLFILFVLVGFQSTATATIQSMDNTSSLTEAQVKQLVKKADDFRLGESSAKVVSE CCHHHHHHHHHHHHCCCCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH VKLYKNDELDKTRQYTVYTREDRESLVLFNSQVEAGQKMLMLGDNYWLLMPKSRRPIRIT HHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEEECCEEEEEECCCCCEEEC PMQKLLGEASVGDISTLTWSEDYQGKWIESTTFELTDGQAIQTEKIKLKATTKGASYFTI HHHHHHCCCCCCCCEEEEECCCCCCCEEECEEEEECCCCEEEEEEEEEEEEECCCEEEEE DLWLEQGTGFPIKADLYLRSGKMAKEAWFIKGVREGEAKVISMVLNDQIQTNQKTVIEYK EEEEECCCCCCEEEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEE EITPTEIADKYYNPAYLSRTKQLDL CCCCHHHHHHHCCCHHHCCCCCCCC >Mature Secondary Structure SKLSHLFILFVLVGFQSTATATIQSMDNTSSLTEAQVKQLVKKADDFRLGESSAKVVSE CHHHHHHHHHHHHCCCCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH VKLYKNDELDKTRQYTVYTREDRESLVLFNSQVEAGQKMLMLGDNYWLLMPKSRRPIRIT HHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEEECCEEEEEECCCCCEEEC PMQKLLGEASVGDISTLTWSEDYQGKWIESTTFELTDGQAIQTEKIKLKATTKGASYFTI HHHHHHCCCCCCCCEEEEECCCCCCCEEECEEEEECCCCEEEEEEEEEEEEECCCEEEEE DLWLEQGTGFPIKADLYLRSGKMAKEAWFIKGVREGEAKVISMVLNDQIQTNQKTVIEYK EEEEECCCCCCEEEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEE EITPTEIADKYYNPAYLSRTKQLDL CCCCHHHHHHHCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA