| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713912
Identifier: 59713912
GI number: 59713912
Start: 825171
End: 826349
Strand: Reverse
Name: 59713912
Synonym: VF_A0729
Alternate gene names: NA
Gene position: 826349-825171 (Counterclockwise)
Preceding gene: 59713913
Following gene: 59713911
Centisome position: 62.12
GC content: 39.61
Gene sequence:
>1179_bases ATGTCGAGCCTAGCTCAGTGGAGAAATCCCAAAACGTTTTTGATTTTAATATCTATTGTTGTTCCTATTGCTTTCTCTAC ATGGAATGCACTTTTAAATAACTTTGTTATCGAAAAAGCCGCTTTTACTGGGGCGGACATTGGTTTATTACAAAGTGTCC GTGAGATCCCTGGCTTTCTTGCATTTACCGCTGTATTCGTCCTTCTTTTTATTCGTGAGCAGAAGTTCATGATCCTCTCT TTGGTGATGTTAGCGGTAGGTGTTGCTATTACTGGGTTCTTCCCAAGTGTATATGGCTTATTATGCACAACATTATTGAT GTCGGTGGGTTTTCACTATTTTGAAACCTTAAAGCAATCATTATCATTGCAATGGCTAACCAAAGAAGAAGCCCCAGAGA TGCTCGGTAAACTTATCTCTATCGGTGCGCTTGCTTCTTTATGTACTTATGGCGTGTTATGGGTATTGCTTGAATTAGTA CAATTAGAGTTTAAATGGATTTACTTCATTGCAGGCTCAATTGCATTAATCGTGACGATCTTCATGTGGTTATCGTTTCC AAATTTTGAAACCGAAACACAACAAACCAAGAAATTGGTACTGCGTAAGCGTTATTGGTTGTATTACGCATTAACCTTCA TGAGTGGTGCTCGTCGTCAGATCTTTATGGTGTTTGCTGGCTTCTTAATGGTTGAGAAGTTCGGGTATTCGGCTTCTGAA ATCACGTTATTGTTTTTAGCCAACTACGTATTTAACTGGTTATTTGCTAAAAAGATTGGACGTTGGATTGGTGTTGTTGG TGAGCGCAAAGCTCTTATGTTTGAATACATCGGTCTGATTTTTGTTTTTGTTGGTTATGCATTGGTACAAACCTCGGAAA TGGCAGCAGCATTGTACATTATTGACCATCTGTTTTTTGCTTTAGCATTAGCGATTAAAACCTATTTCCAAAAAATTGCC GATCCTGCTGATATGGCATCAACGGCTGGAGTAGCCTTTACTATCAACCATATTGCAGCCGTGGTTATCCCTGTGAGCTT TGGCTTGATATGGCTTGTATCACCAGCCGCTGTGTTTTACGTAGGTGCTGGAATGGCCTTTATTTCATTCTTATTGTCGT TAAATATCCCAGAAGCGCCACAAGAAGGAAACGAAACTCGCATTTTTAAGTGGAACTGA
Upstream 100 bases:
>100_bases ATTAAAAGGTAAATAAAGTAAAGATCGCCATGCGTTAAGACGATGTTTCAACGAAATATGTTACAGTGTGTAAATCTAAA TATTAATAAGAGTCACTATC
Downstream 100 bases:
>100_bases TTAAAGTAGTTGTACTTAAGAAGGAAGAGGGAATGTAGGTATGAATATGATAACTCATGATCCTGATAATAAATGTTACT TAATTGCTCTGGAAGGCGAT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Transporter MFS Superfamily; Permease Of Facilitator Superfamily; Permease Facilitator Superfamily; Facilitator Superfamily Permease; MFS Protein Permease Component; Multidrug-Efflux Transporter MFS Family; Facilitator Family Transporter
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSSLAQWRNPKTFLILISIVVPIAFSTWNALLNNFVIEKAAFTGADIGLLQSVREIPGFLAFTAVFVLLFIREQKFMILS LVMLAVGVAITGFFPSVYGLLCTTLLMSVGFHYFETLKQSLSLQWLTKEEAPEMLGKLISIGALASLCTYGVLWVLLELV QLEFKWIYFIAGSIALIVTIFMWLSFPNFETETQQTKKLVLRKRYWLYYALTFMSGARRQIFMVFAGFLMVEKFGYSASE ITLLFLANYVFNWLFAKKIGRWIGVVGERKALMFEYIGLIFVFVGYALVQTSEMAAALYIIDHLFFALALAIKTYFQKIA DPADMASTAGVAFTINHIAAVVIPVSFGLIWLVSPAAVFYVGAGMAFISFLLSLNIPEAPQEGNETRIFKWN
Sequences:
>Translated_392_residues MSSLAQWRNPKTFLILISIVVPIAFSTWNALLNNFVIEKAAFTGADIGLLQSVREIPGFLAFTAVFVLLFIREQKFMILS LVMLAVGVAITGFFPSVYGLLCTTLLMSVGFHYFETLKQSLSLQWLTKEEAPEMLGKLISIGALASLCTYGVLWVLLELV QLEFKWIYFIAGSIALIVTIFMWLSFPNFETETQQTKKLVLRKRYWLYYALTFMSGARRQIFMVFAGFLMVEKFGYSASE ITLLFLANYVFNWLFAKKIGRWIGVVGERKALMFEYIGLIFVFVGYALVQTSEMAAALYIIDHLFFALALAIKTYFQKIA DPADMASTAGVAFTINHIAAVVIPVSFGLIWLVSPAAVFYVGAGMAFISFLLSLNIPEAPQEGNETRIFKWN >Mature_391_residues SSLAQWRNPKTFLILISIVVPIAFSTWNALLNNFVIEKAAFTGADIGLLQSVREIPGFLAFTAVFVLLFIREQKFMILSL VMLAVGVAITGFFPSVYGLLCTTLLMSVGFHYFETLKQSLSLQWLTKEEAPEMLGKLISIGALASLCTYGVLWVLLELVQ LEFKWIYFIAGSIALIVTIFMWLSFPNFETETQQTKKLVLRKRYWLYYALTFMSGARRQIFMVFAGFLMVEKFGYSASEI TLLFLANYVFNWLFAKKIGRWIGVVGERKALMFEYIGLIFVFVGYALVQTSEMAAALYIIDHLFFALALAIKTYFQKIAD PADMASTAGVAFTINHIAAVVIPVSFGLIWLVSPAAVFYVGAGMAFISFLLSLNIPEAPQEGNETRIFKWN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44110; Mature: 43979
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLAQWRNPKTFLILISIVVPIAFSTWNALLNNFVIEKAAFTGADIGLLQSVREIPGFL CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHH AFTAVFVLLFIREQKFMILSLVMLAVGVAITGFFPSVYGLLCTTLLMSVGFHYFETLKQS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLQWLTKEEAPEMLGKLISIGALASLCTYGVLWVLLELVQLEFKWIYFIAGSIALIVTI HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FMWLSFPNFETETQQTKKLVLRKRYWLYYALTFMSGARRQIFMVFAGFLMVEKFGYSASE HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHH ITLLFLANYVFNWLFAKKIGRWIGVVGERKALMFEYIGLIFVFVGYALVQTSEMAAALYI HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDHLFFALALAIKTYFQKIADPADMASTAGVAFTINHIAAVVIPVSFGLIWLVSPAAVFY HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGAGMAFISFLLSLNIPEAPQEGNETRIFKWN HHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC >Mature Secondary Structure SSLAQWRNPKTFLILISIVVPIAFSTWNALLNNFVIEKAAFTGADIGLLQSVREIPGFL CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHH AFTAVFVLLFIREQKFMILSLVMLAVGVAITGFFPSVYGLLCTTLLMSVGFHYFETLKQS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLQWLTKEEAPEMLGKLISIGALASLCTYGVLWVLLELVQLEFKWIYFIAGSIALIVTI HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FMWLSFPNFETETQQTKKLVLRKRYWLYYALTFMSGARRQIFMVFAGFLMVEKFGYSASE HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHH ITLLFLANYVFNWLFAKKIGRWIGVVGERKALMFEYIGLIFVFVGYALVQTSEMAAALYI HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDHLFFALALAIKTYFQKIADPADMASTAGVAFTINHIAAVVIPVSFGLIWLVSPAAVFY HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGAGMAFISFLLSLNIPEAPQEGNETRIFKWN HHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA