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The map label for this gene is 59713910

Identifier: 59713910

GI number: 59713910

Start: 824428

End: 824775

Strand: Reverse

Name: 59713910

Synonym: VF_A0727

Alternate gene names: NA

Gene position: 824775-824428 (Counterclockwise)

Preceding gene: 59713911

Following gene: 59713909

Centisome position: 62.0

GC content: 36.78

Gene sequence:

>348_bases
ATGATGACGTTAAACGCATTTATTGAAAAACTAAGCACACAGCCTGAATTGATTGAATTTACCGAAACCATGGCCGTGAT
AGAGTCTCACTATGAGTTTACACCAACAGAATTTGCGAATGGTAATACGGTTAATTTGGCTGATCAAAATAATGGCTCAT
GTAAGATTTTTGCTTTCGCTTTATTAAATCAACTCAGTGTAGATCAAACATTAGCGTGTTTTGGGCAATATTATCGTCAG
GATGTATTAGAAAATCCACAAGGGGATGATCATCAAAACATTCGCAATTTTATGGTAACTGGTTGGGCGGGTGTTCAATT
TAAAGCTCAGGCACTTCAAGCGAAATAA

Upstream 100 bases:

>100_bases
TGGCAAGATGTATTAGCGAAATAATTGAAACCTAGGTAGAACGTCTATCTAGGTTTTTTTGTATTGGATTTAGATAAAAA
CCAGTTGATAAAAGGAAGTC

Downstream 100 bases:

>100_bases
ACAAAATAAAATCAATAAAGAGATAGGATCATGATAAAACTTGCTGTTATTGGAACTAACTGGATCACAGAACGATTTTT
AGCGGCTGCACTAGAAAGTG

Product: putative cytoplasmic protein

Products: NA

Alternate protein names: Type III Effector HopPmaJ; Cytoplasmic Protein; Type III Effector; Hopj Type III Effector Protein; HopJ Type III Effector Family Protein; HopJ1 Protein

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MMTLNAFIEKLSTQPELIEFTETMAVIESHYEFTPTEFANGNTVNLADQNNGSCKIFAFALLNQLSVDQTLACFGQYYRQ
DVLENPQGDDHQNIRNFMVTGWAGVQFKAQALQAK

Sequences:

>Translated_115_residues
MMTLNAFIEKLSTQPELIEFTETMAVIESHYEFTPTEFANGNTVNLADQNNGSCKIFAFALLNQLSVDQTLACFGQYYRQ
DVLENPQGDDHQNIRNFMVTGWAGVQFKAQALQAK
>Mature_115_residues
MMTLNAFIEKLSTQPELIEFTETMAVIESHYEFTPTEFANGNTVNLADQNNGSCKIFAFALLNQLSVDQTLACFGQYYRQ
DVLENPQGDDHQNIRNFMVTGWAGVQFKAQALQAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12974; Mature: 12974

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLNAFIEKLSTQPELIEFTETMAVIESHYEFTPTEFANGNTVNLADQNNGSCKIFAFA
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEHHHH
LLNQLSVDQTLACFGQYYRQDVLENPQGDDHQNIRNFMVTGWAGVQFKAQALQAK
HHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEHHHHCCC
>Mature Secondary Structure
MMTLNAFIEKLSTQPELIEFTETMAVIESHYEFTPTEFANGNTVNLADQNNGSCKIFAFA
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEHHHH
LLNQLSVDQTLACFGQYYRQDVLENPQGDDHQNIRNFMVTGWAGVQFKAQALQAK
HHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA