| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713903
Identifier: 59713903
GI number: 59713903
Start: 815894
End: 816985
Strand: Reverse
Name: 59713903
Synonym: VF_A0720
Alternate gene names: NA
Gene position: 816985-815894 (Counterclockwise)
Preceding gene: 59713904
Following gene: 59713902
Centisome position: 61.41
GC content: 39.1
Gene sequence:
>1092_bases ATGAAAAAAATACTATTACTCGCACTATTTAGCATCACTCTAATGGGGTGCAATGACCCTGAAAGTGTGGCAGCAGAAGC GGCTCAATTAAAGGTTGAACAGCATCCAGATCGTACCTATGTCGGCGTGCATAATTATTACATTATGGAAAGCAGTGAAC ATGCGGCTTTTGGGCGAAAAAAAGAATTAAAAGTAATGTACCAAGATTTTCCACGTTACTTTGTTGAAAAAGCCAAAGAG TGGCCAAAAGAAGATCTTAATGACGCTAGCTCATACGATTTACCGCGCTTTCAATTTGCGTGGGCTAACTCAAGCTCAAA AGATGAATATGAGAGCGGGCTTAAAATTTGGAGCATGAAAACCGACGGAACAGATTTACGCTTGGTGACTGATGCAACCA TAGATTTAACGGCGGTGCGGAATTTAACTCGTTCGCCAAATAATCGTTACGTCGCTTGGGCTGGCTCTGGTGGTCATAAA AGTGTGTATGATTTAAAAACAGGTAAAGTGACAGTTGTACAGAAGACTACCTCTCCACTTGATATGCTTTGGTCTGAGGA CAGTCGCTATTTGTATCATGAGAGATATCGTAATCGCTATTCGCGTTGGGATTCAGAGACTGGTGAAATTAGTGAGATTG ATTATAAAATTCGTACTGAAGCAGTGTTAACTGAAGATAAAATTATCAAAGTGACTGATGCCGCAGTTGTGGGTTATAAC TTAAAGACAAATGAGCGTTTATTTGTTTTGAGTTCAGATCGCTCATTAAGTGATAAAGAAAGAATTTTTAATGTGAAGTC TATTAGTCCAACAGGAAGGTTTGCATGGGGATCAAATCAAGATTATGGCTGGATGTTTGATACCAAAGAGCAAACAATGA AACAAATGGTTGATGGCTTTGTTCCTGCTCAAATTTTAGGTAAAGACGCCCATTATAGTGCATTAAGCAAAATGACTTAC GTTACTATCGTTGATCGTGTAGAGGATAAAGTATGGTCATGGCGTGCTTTTTCACATGGTGCCATGTCAGGAGAAGGGAT CCTTTATAATGGATTAGCAAACAATGGTTTATGGTTTAAGGAGGATAAATAA
Upstream 100 bases:
>100_bases GATATTCTTCGCGGCGCAAGTGCTGATTTAGGGACAACAGAATACGAATTATCCGTTTTGAAAACAAAAATTAAAGTTTC AGAATTAATAGGCTAGAACA
Downstream 100 bases:
>100_bases TGTCTGATTTAAATACCTATGATCACGGAATCTATCTATTAGGGGCTTACTTTAAAAGTTATCTAGATGAAGAGGGTGAG AGAATTGAAGCGACTTGGCA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MKKILLLALFSITLMGCNDPESVAAEAAQLKVEQHPDRTYVGVHNYYIMESSEHAAFGRKKELKVMYQDFPRYFVEKAKE WPKEDLNDASSYDLPRFQFAWANSSSKDEYESGLKIWSMKTDGTDLRLVTDATIDLTAVRNLTRSPNNRYVAWAGSGGHK SVYDLKTGKVTVVQKTTSPLDMLWSEDSRYLYHERYRNRYSRWDSETGEISEIDYKIRTEAVLTEDKIIKVTDAAVVGYN LKTNERLFVLSSDRSLSDKERIFNVKSISPTGRFAWGSNQDYGWMFDTKEQTMKQMVDGFVPAQILGKDAHYSALSKMTY VTIVDRVEDKVWSWRAFSHGAMSGEGILYNGLANNGLWFKEDK
Sequences:
>Translated_363_residues MKKILLLALFSITLMGCNDPESVAAEAAQLKVEQHPDRTYVGVHNYYIMESSEHAAFGRKKELKVMYQDFPRYFVEKAKE WPKEDLNDASSYDLPRFQFAWANSSSKDEYESGLKIWSMKTDGTDLRLVTDATIDLTAVRNLTRSPNNRYVAWAGSGGHK SVYDLKTGKVTVVQKTTSPLDMLWSEDSRYLYHERYRNRYSRWDSETGEISEIDYKIRTEAVLTEDKIIKVTDAAVVGYN LKTNERLFVLSSDRSLSDKERIFNVKSISPTGRFAWGSNQDYGWMFDTKEQTMKQMVDGFVPAQILGKDAHYSALSKMTY VTIVDRVEDKVWSWRAFSHGAMSGEGILYNGLANNGLWFKEDK >Mature_363_residues MKKILLLALFSITLMGCNDPESVAAEAAQLKVEQHPDRTYVGVHNYYIMESSEHAAFGRKKELKVMYQDFPRYFVEKAKE WPKEDLNDASSYDLPRFQFAWANSSSKDEYESGLKIWSMKTDGTDLRLVTDATIDLTAVRNLTRSPNNRYVAWAGSGGHK SVYDLKTGKVTVVQKTTSPLDMLWSEDSRYLYHERYRNRYSRWDSETGEISEIDYKIRTEAVLTEDKIIKVTDAAVVGYN LKTNERLFVLSSDRSLSDKERIFNVKSISPTGRFAWGSNQDYGWMFDTKEQTMKQMVDGFVPAQILGKDAHYSALSKMTY VTIVDRVEDKVWSWRAFSHGAMSGEGILYNGLANNGLWFKEDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41702; Mature: 41702
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLLALFSITLMGCNDPESVAAEAAQLKVEQHPDRTYVGVHNYYIMESSEHAAFGRK CCHHHHHHHHHHHEECCCCHHHHHHHHHHEEHCCCCCCEEEEEEEEEEEECCCCHHCCCC KELKVMYQDFPRYFVEKAKEWPKEDLNDASSYDLPRFQFAWANSSSKDEYESGLKIWSMK HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEEECCCCCCHHHHCCCEEEEEE TDGTDLRLVTDATIDLTAVRNLTRSPNNRYVAWAGSGGHKSVYDLKTGKVTVVQKTTSPL CCCCEEEEEECCEEEHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCEEEEEEECCCCH DMLWSEDSRYLYHERYRNRYSRWDSETGEISEIDYKIRTEAVLTEDKIIKVTDAAVVGYN HHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEECEEEEEEEEEECCCCEEEEECCEEEEEE LKTNERLFVLSSDRSLSDKERIFNVKSISPTGRFAWGSNQDYGWMFDTKEQTMKQMVDGF ECCCCEEEEEECCCCCCCHHHEEEEEECCCCCCEECCCCCCCCEEECCHHHHHHHHHCCC VPAQILGKDAHYSALSKMTYVTIVDRVEDKVWSWRAFSHGAMSGEGILYNGLANNGLWFK CCHHHHCCCHHHHHHHHEEEEEEHHHHHHHHEEEEEECCCCCCCCCEEEECCCCCCEEEE EDK CCC >Mature Secondary Structure MKKILLLALFSITLMGCNDPESVAAEAAQLKVEQHPDRTYVGVHNYYIMESSEHAAFGRK CCHHHHHHHHHHHEECCCCHHHHHHHHHHEEHCCCCCCEEEEEEEEEEEECCCCHHCCCC KELKVMYQDFPRYFVEKAKEWPKEDLNDASSYDLPRFQFAWANSSSKDEYESGLKIWSMK HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEEECCCCCCHHHHCCCEEEEEE TDGTDLRLVTDATIDLTAVRNLTRSPNNRYVAWAGSGGHKSVYDLKTGKVTVVQKTTSPL CCCCEEEEEECCEEEHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCEEEEEEECCCCH DMLWSEDSRYLYHERYRNRYSRWDSETGEISEIDYKIRTEAVLTEDKIIKVTDAAVVGYN HHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEECEEEEEEEEEECCCCEEEEECCEEEEEE LKTNERLFVLSSDRSLSDKERIFNVKSISPTGRFAWGSNQDYGWMFDTKEQTMKQMVDGF ECCCCEEEEEECCCCCCCHHHEEEEEECCCCCCEECCCCCCCCEEECCHHHHHHHHHCCC VPAQILGKDAHYSALSKMTYVTIVDRVEDKVWSWRAFSHGAMSGEGILYNGLANNGLWFK CCHHHHCCCHHHHHHHHEEEEEEHHHHHHHHEEEEEECCCCCCCCCEEEECCCCCCEEEE EDK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA