| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713904
Identifier: 59713904
GI number: 59713904
Start: 816990
End: 818684
Strand: Reverse
Name: 59713904
Synonym: VF_A0721
Alternate gene names: NA
Gene position: 818684-816990 (Counterclockwise)
Preceding gene: 59713905
Following gene: 59713903
Centisome position: 61.54
GC content: 36.17
Gene sequence:
>1695_bases ATGCTCTGCCAATTTAAACTTATCCCCGGTCGCTTACTTACCCAAAAAGACTTACCGTATATTCTCACTCCCAATGAATT ACTGAATCATCTTAATCGTTTTACTGATCTATCTTCATTAAAAGCATCGTTACCTATTAATTTACAGCGTCACTCTGCAA TTAGTGATTCACAAGGGGTATTTCAAACCGTCAGTCGTATTCGTCAATTGGTTGAGCAGGGGGAGTGGGCTGCATTATCG TTAATGAACCAACATAGAAGTATCGATACTCTGAATTTAGCTCAAGGAAGTGGTCTAAAAAAACGTATTGATAAAGTGGT TAACCCGTCGGTTACTCGTTCTCGTTTAAAAGCAAAACCGACCTTACTTCGTTCAAGTTCAAACGCTTCATCCATCACTC CTATTTCAGAAAAAAAGAGTGATAATAAAATCGTCATCGAGTTTGCAGGGCAATGGCCTAATAATGCGGCATCAATCTCG ATTTCAAAATTAAAAAACATCAATGAAAAGACAGTAAAGCCGAAAAAAGACAGCAAAAATGGACACCGGAGTCTCGTCGA ATTTACGTATTTAGATGATAGAAATAGAGCGCTGTACTTGACGTTACCAAGCATGAATTCAGCCAAAGAGATAAACCTGT TACTGAGCGAATCATTATCTCCTGTAACCAAAGAAACAGAAATGGCAGAGTGGGATAATGTGTTAGTGCCTGTGGTGCCA ATGAAGAGGCAAGAAACCGAACACACATTATATAAAACTGGTTTCTTTTACGTTATTTGGAAAAATAAAGTATGGCGAGA AATCGCTATTAATAAAAATGGTTATTTTTGTGAATATTATCATCAAGGTGATAATCCAAGCCAATCAAAAACCTACCATG TAAATATTACAGGATCGGAGTTTCTGCCAGAATCTAATGTCTCTTTTGAAAAATTTGAATTGTATCAAAAAGGAAAAAAA GTCTTTTCTGGTGAACTCGATCTATGTGAACAAGCAAGAGTATTTGATTTAGGAGAAGAAGAGGTCACATTAAAATTTGT AGATTTTGATCACGATGAAATATGTCTAGCGACACACGAAAGCCCAACAAAAGATGATGGCTCAAATAATACGAAACGAA TAAGTCATCCCATGCCTCATATTTGGTTGCCTTATAAAATATTAGGCCAACAGCAAACTGATTGTTATGTCTATTATAGC CAAAGATCATTGAATGAAAATGACATCAACGCGCTAGAGGCTGATTATATTAATGTCGCGGTATCCACTGATGAAATGTC TGTTTATAGCAAACAGCAAACATTTGAAGGCGATAGTATTTACAAGTTACCTATAGTTGATAATTCAGTTTTTGGTTCAG AATTAATCAATAAGCAAAGTGATAGCAACATTGCAGCAATGACGGTGATGCCACCAAAAAATCAAATTACATTACGTTAC CGAATTTGCAGCACAACAGATCAACCTGATGATTTCATAATGTTAAGAAATGAAGACCAAGAATGGTCACAGAAAGTTTA TTTCAGGCAAGCAAAAGTTGACGATGAAGGTTTCTTAAATCTCCCATTTTCTGGTTGGCCAAAAGAAGTTGAAGAGGTTG ATATTCTTCGCGGCGCAAGTGCTGATTTAGGGACAACAGAATACGAATTATCCGTTTTGAAAACAAAAATTAAAGTTTCA GAATTAATAGGCTAG
Upstream 100 bases:
>100_bases GTGTGAAGGGCAATAGGGTTTGACTGAGTTCTCTGTTCATATTTATATAGCAGGCAATTTATTTTTAGATACTTTCAATA CACTGAATGTGGAGATGCAG
Downstream 100 bases:
>100_bases AACAATGAAAAAAATACTATTACTCGCACTATTTAGCATCACTCTAATGGGGTGCAATGACCCTGAAAGTGTGGCAGCAG AAGCGGCTCAATTAAAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MLCQFKLIPGRLLTQKDLPYILTPNELLNHLNRFTDLSSLKASLPINLQRHSAISDSQGVFQTVSRIRQLVEQGEWAALS LMNQHRSIDTLNLAQGSGLKKRIDKVVNPSVTRSRLKAKPTLLRSSSNASSITPISEKKSDNKIVIEFAGQWPNNAASIS ISKLKNINEKTVKPKKDSKNGHRSLVEFTYLDDRNRALYLTLPSMNSAKEINLLLSESLSPVTKETEMAEWDNVLVPVVP MKRQETEHTLYKTGFFYVIWKNKVWREIAINKNGYFCEYYHQGDNPSQSKTYHVNITGSEFLPESNVSFEKFELYQKGKK VFSGELDLCEQARVFDLGEEEVTLKFVDFDHDEICLATHESPTKDDGSNNTKRISHPMPHIWLPYKILGQQQTDCYVYYS QRSLNENDINALEADYINVAVSTDEMSVYSKQQTFEGDSIYKLPIVDNSVFGSELINKQSDSNIAAMTVMPPKNQITLRY RICSTTDQPDDFIMLRNEDQEWSQKVYFRQAKVDDEGFLNLPFSGWPKEVEEVDILRGASADLGTTEYELSVLKTKIKVS ELIG
Sequences:
>Translated_564_residues MLCQFKLIPGRLLTQKDLPYILTPNELLNHLNRFTDLSSLKASLPINLQRHSAISDSQGVFQTVSRIRQLVEQGEWAALS LMNQHRSIDTLNLAQGSGLKKRIDKVVNPSVTRSRLKAKPTLLRSSSNASSITPISEKKSDNKIVIEFAGQWPNNAASIS ISKLKNINEKTVKPKKDSKNGHRSLVEFTYLDDRNRALYLTLPSMNSAKEINLLLSESLSPVTKETEMAEWDNVLVPVVP MKRQETEHTLYKTGFFYVIWKNKVWREIAINKNGYFCEYYHQGDNPSQSKTYHVNITGSEFLPESNVSFEKFELYQKGKK VFSGELDLCEQARVFDLGEEEVTLKFVDFDHDEICLATHESPTKDDGSNNTKRISHPMPHIWLPYKILGQQQTDCYVYYS QRSLNENDINALEADYINVAVSTDEMSVYSKQQTFEGDSIYKLPIVDNSVFGSELINKQSDSNIAAMTVMPPKNQITLRY RICSTTDQPDDFIMLRNEDQEWSQKVYFRQAKVDDEGFLNLPFSGWPKEVEEVDILRGASADLGTTEYELSVLKTKIKVS ELIG >Mature_564_residues MLCQFKLIPGRLLTQKDLPYILTPNELLNHLNRFTDLSSLKASLPINLQRHSAISDSQGVFQTVSRIRQLVEQGEWAALS LMNQHRSIDTLNLAQGSGLKKRIDKVVNPSVTRSRLKAKPTLLRSSSNASSITPISEKKSDNKIVIEFAGQWPNNAASIS ISKLKNINEKTVKPKKDSKNGHRSLVEFTYLDDRNRALYLTLPSMNSAKEINLLLSESLSPVTKETEMAEWDNVLVPVVP MKRQETEHTLYKTGFFYVIWKNKVWREIAINKNGYFCEYYHQGDNPSQSKTYHVNITGSEFLPESNVSFEKFELYQKGKK VFSGELDLCEQARVFDLGEEEVTLKFVDFDHDEICLATHESPTKDDGSNNTKRISHPMPHIWLPYKILGQQQTDCYVYYS QRSLNENDINALEADYINVAVSTDEMSVYSKQQTFEGDSIYKLPIVDNSVFGSELINKQSDSNIAAMTVMPPKNQITLRY RICSTTDQPDDFIMLRNEDQEWSQKVYFRQAKVDDEGFLNLPFSGWPKEVEEVDILRGASADLGTTEYELSVLKTKIKVS ELIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64344; Mature: 64344
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCQFKLIPGRLLTQKDLPYILTPNELLNHLNRFTDLSSLKASLPINLQRHSAISDSQGV CEEEEEECCCCEECCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCEEEHHCCCCCCCCHH FQTVSRIRQLVEQGEWAALSLMNQHRSIDTLNLAQGSGLKKRIDKVVNPSVTRSRLKAKP HHHHHHHHHHHHCCCEEEEHHHHHCCCCCEEECCCCCCHHHHHHHHCCCCHHHHHHHCCC TLLRSSSNASSITPISEKKSDNKIVIEFAGQWPNNAASISISKLKNINEKTVKPKKDSKN CEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEHHHHCCCCHHCCCCCCCCCC GHRSLVEFTYLDDRNRALYLTLPSMNSAKEINLLLSESLSPVTKETEMAEWDNVLVPVVP CCCEEEEEEEECCCCCEEEEECCCCCCCHHEEEEHHCCCCCCCCCCHHHHHCCEEEEECC MKRQETEHTLYKTGFFYVIWKNKVWREIAINKNGYFCEYYHQGDNPSQSKTYHVNITGSE CCCCCCHHEEEECCEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEECCHH FLPESNVSFEKFELYQKGKKVFSGELDLCEQARVFDLGEEEVTLKFVDFDHDEICLATHE CCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCEEECCCCEEEEEEEECCCCCEEEEECC SPTKDDGSNNTKRISHPMPHIWLPYKILGQQQTDCYVYYSQRSLNENDINALEADYINVA CCCCCCCCCCCEEECCCCCCEECCHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEE VSTDEMSVYSKQQTFEGDSIYKLPIVDNSVFGSELINKQSDSNIAAMTVMPPKNQITLRY EECCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEEE RICSTTDQPDDFIMLRNEDQEWSQKVYFRQAKVDDEGFLNLPFSGWPKEVEEVDILRGAS EEECCCCCCCCEEEEECCCHHHHHHHHEEEECCCCCCEEECCCCCCCHHHHHHHHHCCCC ADLGTTEYELSVLKTKIKVSELIG CCCCCCCEEHHHHHHHHHHHHHCC >Mature Secondary Structure MLCQFKLIPGRLLTQKDLPYILTPNELLNHLNRFTDLSSLKASLPINLQRHSAISDSQGV CEEEEEECCCCEECCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCEEEHHCCCCCCCCHH FQTVSRIRQLVEQGEWAALSLMNQHRSIDTLNLAQGSGLKKRIDKVVNPSVTRSRLKAKP HHHHHHHHHHHHCCCEEEEHHHHHCCCCCEEECCCCCCHHHHHHHHCCCCHHHHHHHCCC TLLRSSSNASSITPISEKKSDNKIVIEFAGQWPNNAASISISKLKNINEKTVKPKKDSKN CEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEHHHHCCCCHHCCCCCCCCCC GHRSLVEFTYLDDRNRALYLTLPSMNSAKEINLLLSESLSPVTKETEMAEWDNVLVPVVP CCCEEEEEEEECCCCCEEEEECCCCCCCHHEEEEHHCCCCCCCCCCHHHHHCCEEEEECC MKRQETEHTLYKTGFFYVIWKNKVWREIAINKNGYFCEYYHQGDNPSQSKTYHVNITGSE CCCCCCHHEEEECCEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEECCHH FLPESNVSFEKFELYQKGKKVFSGELDLCEQARVFDLGEEEVTLKFVDFDHDEICLATHE CCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCEEECCCCEEEEEEEECCCCCEEEEECC SPTKDDGSNNTKRISHPMPHIWLPYKILGQQQTDCYVYYSQRSLNENDINALEADYINVA CCCCCCCCCCCEEECCCCCCEECCHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEE VSTDEMSVYSKQQTFEGDSIYKLPIVDNSVFGSELINKQSDSNIAAMTVMPPKNQITLRY EECCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEEE RICSTTDQPDDFIMLRNEDQEWSQKVYFRQAKVDDEGFLNLPFSGWPKEVEEVDILRGAS EEECCCCCCCCEEEEECCCHHHHHHHHEEEECCCCCCEEECCCCCCCHHHHHHHHHCCCC ADLGTTEYELSVLKTKIKVSELIG CCCCCCCEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA