| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713900
Identifier: 59713900
GI number: 59713900
Start: 808534
End: 809736
Strand: Reverse
Name: 59713900
Synonym: VF_A0717
Alternate gene names: NA
Gene position: 809736-808534 (Counterclockwise)
Preceding gene: 59713901
Following gene: 59713899
Centisome position: 60.87
GC content: 38.32
Gene sequence:
>1203_bases ATGGCTTTAAATAAAACATTCCTTATTGCATGCACTGTGATACTCCTATACGGATGCAACCAAGACGAATCCTCAACACC AAATGCGGTAGTTGAACCACCAAAAACTGATGTCGAATTGCTTAACGAGCAAGAGTGGGATGATAACCGTGTTTATGTCA CTAAAGATAACTACATTTTAATGAAAGAAGCCAATGGCACGATACCGGGAATAATGAAGCCCTGCTTTGTGGTGAACAGC GCCAAAGAGTGGCCAAGAGAAGATTTATCAAATGCGGATTCTTACGACTTACCGAGAGTGGATTTCAGGTGGAATAACGG GGATTTTGTGAGTGCTTCTGCTAGTGAAAAAGCCATTTACGAATCTTACGATAAAGTATGGAGTATAAAAACAGATGGTA CCGATTTGCGATTAGTGACGGATGATTTTAGTGGTGATGTACGTATTATGCGCCGTTCCCCCAACAACCGTTATTTAGCT TATTCATATGCATCAAGAACAAGCGGTGGCACTGATAAAGTAGTATTCGATGTGCAAACTCAGAAATCCACATTACTTGG TACAGATTTAGGTCATTCTCAATTTCTCTGGGCGGAAGATAGTAGCTATCTGTATTTTGAAGACAGAGCCATATATTGGA AATACGAACTTGCTACAGGCAAAACCACTCAAATGGACGATGATTTTTATTTCTCAGAAGTTGGGGTGATATACGGCGGT AAGCGGTATGTGGTCTCTGATTATGGGATTGTTGTTTTTAACGAGAGTAATAACAAACGACTTTATTCAATAGGTTTATC TACAGCTGAAGAGGATAAACTCGCTGTTAAGAACATTTCACTTTCGTATGATAGAAAATATTTTTTGAAAAGCAGGTCAA TCAGCCCTGATGGAAAGTATGCGTGGGGTGAGTCGGCACAATATCGTTATTTTATTAATACAGAAACAAAAGAAGTTAAA TTAGAAAAAAAAGACCGAAAGAAAAAAAGCCAATACCGATTTTTTGATGTATTAGGATTTAATGCCGAATATGTTCGCTC AGCTTCTGCTGGCAGTGCAAGACAGTATAAATTAACAAAAGATAAAAAATTATTTTCTCAAACTCTGCATTGGGGACAAA TCTGCTCAGGCCATTCCGCAACACTGTCTTGGTTATACAACGGTTTTGCAAATAATGGTGCATTTGTTAAGGAGGATAAA TGA
Upstream 100 bases:
>100_bases CTCAGCATTGGGGGCAAATCTGCTCAGGCCATTCAGCAACACTGTCGTGGTTATACAATGGTTTTGCAAATAATGGTGCA TTTATCAAGGAGGGTAAATA
Downstream 100 bases:
>100_bases TGAGTAATAAAGCAGTGTTAGCTGAAGGGATTTATTTATTTTCTACGCAGTTTTATGGGTAATATAATGAAACAACAAGA AAAACTTTATTTGAAAACTG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MALNKTFLIACTVILLYGCNQDESSTPNAVVEPPKTDVELLNEQEWDDNRVYVTKDNYILMKEANGTIPGIMKPCFVVNS AKEWPREDLSNADSYDLPRVDFRWNNGDFVSASASEKAIYESYDKVWSIKTDGTDLRLVTDDFSGDVRIMRRSPNNRYLA YSYASRTSGGTDKVVFDVQTQKSTLLGTDLGHSQFLWAEDSSYLYFEDRAIYWKYELATGKTTQMDDDFYFSEVGVIYGG KRYVVSDYGIVVFNESNNKRLYSIGLSTAEEDKLAVKNISLSYDRKYFLKSRSISPDGKYAWGESAQYRYFINTETKEVK LEKKDRKKKSQYRFFDVLGFNAEYVRSASAGSARQYKLTKDKKLFSQTLHWGQICSGHSATLSWLYNGFANNGAFVKEDK
Sequences:
>Translated_400_residues MALNKTFLIACTVILLYGCNQDESSTPNAVVEPPKTDVELLNEQEWDDNRVYVTKDNYILMKEANGTIPGIMKPCFVVNS AKEWPREDLSNADSYDLPRVDFRWNNGDFVSASASEKAIYESYDKVWSIKTDGTDLRLVTDDFSGDVRIMRRSPNNRYLA YSYASRTSGGTDKVVFDVQTQKSTLLGTDLGHSQFLWAEDSSYLYFEDRAIYWKYELATGKTTQMDDDFYFSEVGVIYGG KRYVVSDYGIVVFNESNNKRLYSIGLSTAEEDKLAVKNISLSYDRKYFLKSRSISPDGKYAWGESAQYRYFINTETKEVK LEKKDRKKKSQYRFFDVLGFNAEYVRSASAGSARQYKLTKDKKLFSQTLHWGQICSGHSATLSWLYNGFANNGAFVKEDK >Mature_399_residues ALNKTFLIACTVILLYGCNQDESSTPNAVVEPPKTDVELLNEQEWDDNRVYVTKDNYILMKEANGTIPGIMKPCFVVNSA KEWPREDLSNADSYDLPRVDFRWNNGDFVSASASEKAIYESYDKVWSIKTDGTDLRLVTDDFSGDVRIMRRSPNNRYLAY SYASRTSGGTDKVVFDVQTQKSTLLGTDLGHSQFLWAEDSSYLYFEDRAIYWKYELATGKTTQMDDDFYFSEVGVIYGGK RYVVSDYGIVVFNESNNKRLYSIGLSTAEEDKLAVKNISLSYDRKYFLKSRSISPDGKYAWGESAQYRYFINTETKEVKL EKKDRKKKSQYRFFDVLGFNAEYVRSASAGSARQYKLTKDKKLFSQTLHWGQICSGHSATLSWLYNGFANNGAFVKEDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45838; Mature: 45707
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNKTFLIACTVILLYGCNQDESSTPNAVVEPPKTDVELLNEQEWDDNRVYVTKDNYIL CCCCCHHHHHHHHHHEECCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCEEEEEECCEEE MKEANGTIPGIMKPCFVVNSAKEWPREDLSNADSYDLPRVDFRWNNGDFVSASASEKAIY EECCCCCCCCCCCCEEEECCCHHCCHHHHCCCCCCCCCCEEEEECCCCEEECCCCCHHHH ESYDKVWSIKTDGTDLRLVTDDFSGDVRIMRRSPNNRYLAYSYASRTSGGTDKVVFDVQT HHHHHEEEEEECCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEC QKSTLLGTDLGHSQFLWAEDSSYLYFEDRAIYWKYELATGKTTQMDDDFYFSEVGVIYGG CCCEEEECCCCCCEEEEECCCCEEEEECCEEEEEEEECCCCCCCCCCCEEEEEEEEEECC KRYVVSDYGIVVFNESNNKRLYSIGLSTAEEDKLAVKNISLSYDRKYFLKSRSISPDGKY EEEEEECCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCE AWGESAQYRYFINTETKEVKLEKKDRKKKSQYRFFDVLGFNAEYVRSASAGSARQYKLTK ECCCCCEEEEEEECCCEEEEECHHHHHHHHHCEEEEEECCCHHHHHCCCCCCCEEEEECH DKKLFSQTLHWGQICSGHSATLSWLYNGFANNGAFVKEDK HHHHHHHHCCHHHHCCCCCCEEHHHHHCCCCCCEEEECCC >Mature Secondary Structure ALNKTFLIACTVILLYGCNQDESSTPNAVVEPPKTDVELLNEQEWDDNRVYVTKDNYIL CCCCHHHHHHHHHHEECCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCEEEEEECCEEE MKEANGTIPGIMKPCFVVNSAKEWPREDLSNADSYDLPRVDFRWNNGDFVSASASEKAIY EECCCCCCCCCCCCEEEECCCHHCCHHHHCCCCCCCCCCEEEEECCCCEEECCCCCHHHH ESYDKVWSIKTDGTDLRLVTDDFSGDVRIMRRSPNNRYLAYSYASRTSGGTDKVVFDVQT HHHHHEEEEEECCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEC QKSTLLGTDLGHSQFLWAEDSSYLYFEDRAIYWKYELATGKTTQMDDDFYFSEVGVIYGG CCCEEEECCCCCCEEEEECCCCEEEEECCEEEEEEEECCCCCCCCCCCEEEEEEEEEECC KRYVVSDYGIVVFNESNNKRLYSIGLSTAEEDKLAVKNISLSYDRKYFLKSRSISPDGKY EEEEEECCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCE AWGESAQYRYFINTETKEVKLEKKDRKKKSQYRFFDVLGFNAEYVRSASAGSARQYKLTK ECCCCCEEEEEEECCCEEEEECHHHHHHHHHCEEEEEECCCHHHHHCCCCCCCEEEEECH DKKLFSQTLHWGQICSGHSATLSWLYNGFANNGAFVKEDK HHHHHHHHCCHHHHCCCCCCEEHHHHHCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA