| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713901
Identifier: 59713901
GI number: 59713901
Start: 809736
End: 810962
Strand: Reverse
Name: 59713901
Synonym: VF_A0718
Alternate gene names: NA
Gene position: 810962-809736 (Counterclockwise)
Preceding gene: 59713902
Following gene: 59713900
Centisome position: 60.96
GC content: 38.88
Gene sequence:
>1227_bases ATGAATTCAAAATACCTATGGACAGCATTAGCTGCGCTTATTTTCCTAAACGGATGCAACCAAGACGAACCCTCAACGTT AAGTACAGCAGTTGAACCACCCAAAACTGACGTCGAATTGCTTAACAAGCAAGAGTGGGATGATAACCGAGTTTATGTCA CTAAAGATAACTACATCTTAATGAAAGAAGCCAATGGCACTATACCGGGAATAATGAAGCCCTGCTTTGTGGTGAACAGC GCCAAAGAGTGGCCAAGAGAAGATTTATCAAATACGGATTCATACGACTTACCGAGAGTGGATTTTAGATGGGACAATGG TGAATTTACTAATGCCTCATCAGATGAGAAAGCGATTTATGAAGCGAGAGACAAAATTTGGAGCATAAAAACAGATGGCA CCGATTTACGATTAGTGACTGATTTTTTAGATGTTGTTCCGCCAAGGGCACATAACAGAGCGGTAACGGTTAAAATGATG CGTCGGTCACCTAATAATCGCTACTTAGCTTGGAGTAATAACGTTGAAAAAGTTATTTTTGATTTAGAAACCCAAGAGTC GATAGTTTTGGGTGCTGATAGGGGCCATTCTCAGTTCCTCTGGGCGGAAGACAGCAGTTATTTGTATTTTGAAGACAGAG CCAAATATTGGAAATACGAAATTACCACAGGAAAAACTACCCAAATGAACGATGACTTCCATTTTTCAGAAGTGGGGGTG ATATACGGTGGGAAGAGGTATGTGGTCTCTGATTTTGGTGTTGGTGTCTATGATGAGAAGAGTGATAAGCGTTTGTATGG TGTAAGCATCTACCCAAAAGAATTACAAGAGCAGAAAAAAGAACAAGGTTATTTAGTTATCACTAGAGAGCATTCATTAC AATATGAATTAAAAAGTCGCTCAATCAGCCCTGATGGAAAGTATGCGTGGGGTGAGTCAGCACAATATCGTTATTTTATT AATACAGAAACAAAAGAAGTTAAATTAGAAAAAAAAGACCGAAAGAAAAAAAGCCAATACCGATTTTTTGATGTATTAGG ACTTAACGCCGATTATGTTCGCTCAGCTTCTGCTGGCAGTGCAAGGCAATATAAATTAACAAAAGATAAAAAGTTATTTT CTCAAACTCAGCATTGGGGGCAAATCTGCTCAGGCCATTCAGCAACACTGTCGTGGTTATACAATGGTTTTGCAAATAAT GGTGCATTTATCAAGGAGGGTAAATAA
Upstream 100 bases:
>100_bases GCCTGAATAAAAACTGGTTCTTATTGTTAAATGAGCTGGGTTAATAAATCCAGCATTCTATACCAAGACATTGCAATCAG TGAATTAGTGTAGGGATACC
Downstream 100 bases:
>100_bases TGGCTTTAAATAAAACATTCCTTATTGCATGCACTGTGATACTCCTATACGGATGCAACCAAGACGAATCCTCAACACCA AATGCGGTAGTTGAACCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MNSKYLWTALAALIFLNGCNQDEPSTLSTAVEPPKTDVELLNKQEWDDNRVYVTKDNYILMKEANGTIPGIMKPCFVVNS AKEWPREDLSNTDSYDLPRVDFRWDNGEFTNASSDEKAIYEARDKIWSIKTDGTDLRLVTDFLDVVPPRAHNRAVTVKMM RRSPNNRYLAWSNNVEKVIFDLETQESIVLGADRGHSQFLWAEDSSYLYFEDRAKYWKYEITTGKTTQMNDDFHFSEVGV IYGGKRYVVSDFGVGVYDEKSDKRLYGVSIYPKELQEQKKEQGYLVITREHSLQYELKSRSISPDGKYAWGESAQYRYFI NTETKEVKLEKKDRKKKSQYRFFDVLGLNADYVRSASAGSARQYKLTKDKKLFSQTQHWGQICSGHSATLSWLYNGFANN GAFIKEGK
Sequences:
>Translated_408_residues MNSKYLWTALAALIFLNGCNQDEPSTLSTAVEPPKTDVELLNKQEWDDNRVYVTKDNYILMKEANGTIPGIMKPCFVVNS AKEWPREDLSNTDSYDLPRVDFRWDNGEFTNASSDEKAIYEARDKIWSIKTDGTDLRLVTDFLDVVPPRAHNRAVTVKMM RRSPNNRYLAWSNNVEKVIFDLETQESIVLGADRGHSQFLWAEDSSYLYFEDRAKYWKYEITTGKTTQMNDDFHFSEVGV IYGGKRYVVSDFGVGVYDEKSDKRLYGVSIYPKELQEQKKEQGYLVITREHSLQYELKSRSISPDGKYAWGESAQYRYFI NTETKEVKLEKKDRKKKSQYRFFDVLGLNADYVRSASAGSARQYKLTKDKKLFSQTQHWGQICSGHSATLSWLYNGFANN GAFIKEGK >Mature_408_residues MNSKYLWTALAALIFLNGCNQDEPSTLSTAVEPPKTDVELLNKQEWDDNRVYVTKDNYILMKEANGTIPGIMKPCFVVNS AKEWPREDLSNTDSYDLPRVDFRWDNGEFTNASSDEKAIYEARDKIWSIKTDGTDLRLVTDFLDVVPPRAHNRAVTVKMM RRSPNNRYLAWSNNVEKVIFDLETQESIVLGADRGHSQFLWAEDSSYLYFEDRAKYWKYEITTGKTTQMNDDFHFSEVGV IYGGKRYVVSDFGVGVYDEKSDKRLYGVSIYPKELQEQKKEQGYLVITREHSLQYELKSRSISPDGKYAWGESAQYRYFI NTETKEVKLEKKDRKKKSQYRFFDVLGLNADYVRSASAGSARQYKLTKDKKLFSQTQHWGQICSGHSATLSWLYNGFANN GAFIKEGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47203; Mature: 47203
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKYLWTALAALIFLNGCNQDEPSTLSTAVEPPKTDVELLNKQEWDDNRVYVTKDNYIL CCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCEEEEEECCEEE MKEANGTIPGIMKPCFVVNSAKEWPREDLSNTDSYDLPRVDFRWDNGEFTNASSDEKAIY EECCCCCCCCHHCCEEEECCCHHCCHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHH EARDKIWSIKTDGTDLRLVTDFLDVVPPRAHNRAVTVKMMRRSPNNRYLAWSNNVEKVIF HHHHHEEEEECCCCCEEHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEE DLETQESIVLGADRGHSQFLWAEDSSYLYFEDRAKYWKYEITTGKTTQMNDDFHFSEVGV EECCCCEEEEECCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCEECCCCCCEEEEEE IYGGKRYVVSDFGVGVYDEKSDKRLYGVSIYPKELQEQKKEQGYLVITREHSLQYELKSR EECCCEEEEEECCCCEECCCCCCEEEEEEECHHHHHHHHHHCCEEEEEECCCEEEEECCC SISPDGKYAWGESAQYRYFINTETKEVKLEKKDRKKKSQYRFFDVLGLNADYVRSASAGS CCCCCCCEECCCCCEEEEEEECCCCEEEECHHHHHHHHHCEEEEEECCCHHHHCCCCCCC ARQYKLTKDKKLFSQTQHWGQICSGHSATLSWLYNGFANNGAFIKEGK CEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCC >Mature Secondary Structure MNSKYLWTALAALIFLNGCNQDEPSTLSTAVEPPKTDVELLNKQEWDDNRVYVTKDNYIL CCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCEEEEEECCEEE MKEANGTIPGIMKPCFVVNSAKEWPREDLSNTDSYDLPRVDFRWDNGEFTNASSDEKAIY EECCCCCCCCHHCCEEEECCCHHCCHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHH EARDKIWSIKTDGTDLRLVTDFLDVVPPRAHNRAVTVKMMRRSPNNRYLAWSNNVEKVIF HHHHHEEEEECCCCCEEHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEE DLETQESIVLGADRGHSQFLWAEDSSYLYFEDRAKYWKYEITTGKTTQMNDDFHFSEVGV EECCCCEEEEECCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCEECCCCCCEEEEEE IYGGKRYVVSDFGVGVYDEKSDKRLYGVSIYPKELQEQKKEQGYLVITREHSLQYELKSR EECCCEEEEEECCCCEECCCCCCEEEEEEECHHHHHHHHHHCCEEEEEECCCEEEEECCC SISPDGKYAWGESAQYRYFINTETKEVKLEKKDRKKKSQYRFFDVLGLNADYVRSASAGS CCCCCCCEECCCCCEEEEEEECCCCEEEECHHHHHHHHHCEEEEEECCCHHHHCCCCCCC ARQYKLTKDKKLFSQTQHWGQICSGHSATLSWLYNGFANNGAFIKEGK CEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA