| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713820
Identifier: 59713820
GI number: 59713820
Start: 714441
End: 714956
Strand: Reverse
Name: 59713820
Synonym: VF_A0637
Alternate gene names: NA
Gene position: 714956-714441 (Counterclockwise)
Preceding gene: 59713821
Following gene: 59713819
Centisome position: 53.74
GC content: 36.24
Gene sequence:
>516_bases ATGTGTAGTATTGCATTTGAACATGCAGAAAGCGCAAAAATATTATTAGCGTCTGGAAATTATACCTCGGCATCAGGTCT TGTTCGATTACAGTATGAAGCTTTTGTAAGGGCTATGTGGTTACTTTATAGTGCTTCTGATGTAGCGGTATCAAAATTAA TGTGTGAACTTACAGCTGAATCAGCTCACAAAGCAAATAAACTACCGATGCTAAGTGAAATGTTAATTAAACTTGAAGGT AAGGCTCCCCAAGAAGCTTTGGATATGCTAATTGAATTTAAAGAATACTCTTGGAAACCATTAAGCTCTTTTGTACATGG CGGAATACATGCGGTGAATCGACATAATAAAGGTTATCCAATTCGCTTTCTTGAGCAAATGTTGATTATTTCTAATGGGG TATCAATCATGGCTGGAATGTTATTAATTATTTTACACGGCGGCGGTGAATATATTGGTAAAATCCCTCCTATACAGCGT CGATTTGCTGATTGTTTACCAAAACCGAAAGTATAA
Upstream 100 bases:
>100_bases TCATCTATTATCGAGATCTGCTGAGTTAGAAAAAGAACTTTTAGTTTTCCTTGCTTTAGCTCCTTGTAATATGTCTGAAC GAGTTCGTGTCAGCAAAATT
Downstream 100 bases:
>100_bases ACTCATAACAAATGCATCAACACGATTTGCTACACTCGGCGTTGTCAGTTTGCCTTTAGTTTCAGTGATTAAGGCAGTAA AATTCAGCTAGGTATGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MCSIAFEHAESAKILLASGNYTSASGLVRLQYEAFVRAMWLLYSASDVAVSKLMCELTAESAHKANKLPMLSEMLIKLEG KAPQEALDMLIEFKEYSWKPLSSFVHGGIHAVNRHNKGYPIRFLEQMLIISNGVSIMAGMLLIILHGGGEYIGKIPPIQR RFADCLPKPKV
Sequences:
>Translated_171_residues MCSIAFEHAESAKILLASGNYTSASGLVRLQYEAFVRAMWLLYSASDVAVSKLMCELTAESAHKANKLPMLSEMLIKLEG KAPQEALDMLIEFKEYSWKPLSSFVHGGIHAVNRHNKGYPIRFLEQMLIISNGVSIMAGMLLIILHGGGEYIGKIPPIQR RFADCLPKPKV >Mature_171_residues MCSIAFEHAESAKILLASGNYTSASGLVRLQYEAFVRAMWLLYSASDVAVSKLMCELTAESAHKANKLPMLSEMLIKLEG KAPQEALDMLIEFKEYSWKPLSSFVHGGIHAVNRHNKGYPIRFLEQMLIISNGVSIMAGMLLIILHGGGEYIGKIPPIQR RFADCLPKPKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18951; Mature: 18951
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSIAFEHAESAKILLASGNYTSASGLVRLQYEAFVRAMWLLYSASDVAVSKLMCELTAE CCCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SAHKANKLPMLSEMLIKLEGKAPQEALDMLIEFKEYSWKPLSSFVHGGIHAVNRHNKGYP HHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHCCCCCCCH IRFLEQMLIISNGVSIMAGMLLIILHGGGEYIGKIPPIQRRFADCLPKPKV HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MCSIAFEHAESAKILLASGNYTSASGLVRLQYEAFVRAMWLLYSASDVAVSKLMCELTAE CCCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SAHKANKLPMLSEMLIKLEGKAPQEALDMLIEFKEYSWKPLSSFVHGGIHAVNRHNKGYP HHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHCCCCCCCH IRFLEQMLIISNGVSIMAGMLLIILHGGGEYIGKIPPIQRRFADCLPKPKV HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA